BLASTX nr result

ID: Papaver23_contig00022839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00022839
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]    85   9e-15
emb|CBI36837.3| unnamed protein product [Vitis vinifera]               81   1e-13
ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [...    79   5e-13
ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002872835.1| hypothetical protein ARALYDRAFT_490319 [Arab...    70   3e-10

>emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
          Length = 3804

 Score = 84.7 bits (208), Expect = 9e-15
 Identities = 63/185 (34%), Positives = 95/185 (51%), Gaps = 2/185 (1%)
 Frame = -3

Query: 552  CQVSKTNSDMQPDLSKSLVDHCQVDGCPDVLGKESSRCFKGTLVSKEVESPSGAEGDVNV 373
            CQ+ K NS+M   +S+S V+H + +    ++  E S+           E+P  + G++N 
Sbjct: 3241 CQLKKNNSEMHALVSRSFVNHQKTNDSAGIIESEPSKFLGVDSAFDATENPHYSGGNIND 3300

Query: 372  KGFEEVALLLGGQTVHHTKGDLE-FGMRLPHIDEVTSRALVGKDLENISEEISGSVPPSK 196
            +   E               DLE     LP  D  T+ +L   + +NIS+    S   S 
Sbjct: 3301 EKAGE---------------DLENHETPLPPADVATTASL--SEEKNISDL---SXVASA 3340

Query: 195  SSEMP-LDAPVQSHRSEICSILQFNIRDLRTSREKRLARLQSSGSMHGKTNSKRCYAAAT 19
              + P LD P+ S   +ICS LQF+  +LRT R +RL+RLQSS    G+T ++RCY+AAT
Sbjct: 3341 VQDTPVLDTPMPSSDLKICSTLQFSFEELRTRRHQRLSRLQSSSYKCGRTTTERCYSAAT 3400

Query: 18   LELSE 4
            LE S+
Sbjct: 3401 LEFSQ 3405


>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 1/182 (0%)
 Frame = -3

Query: 546 VSKTNSDMQPDLSKSLVDHCQVDGCPDVLGKESSRCFKGTLVSKEVESPSGAEGDVNVKG 367
           + K NS+M   +S+S V+H + +    ++  E S+           E+P  + G++N + 
Sbjct: 443 LKKNNSEMHALVSRSFVNHQKTNDSAGIIESEPSKFLGVDSAFDATENPHYSGGNINDEK 502

Query: 366 FEEVALLLGGQTVHHTKGDLE-FGMRLPHIDEVTSRALVGKDLENISEEISGSVPPSKSS 190
             E               DLE     LP  D  T+ +L   + +NIS+ +SG     + +
Sbjct: 503 AGE---------------DLENHETPLPPADVATTASL--SEEKNISD-LSGVASAVQDT 544

Query: 189 EMPLDAPVQSHRSEICSILQFNIRDLRTSREKRLARLQSSGSMHGKTNSKRCYAAATLEL 10
            + LD P+ S   +ICS LQF+  +LRT R +RL+RLQSS    G+T ++RCY+AATLE 
Sbjct: 545 PV-LDTPMPSSDLKICSTLQFSFEELRTRRHQRLSRLQSSSYKCGRTTTERCYSAATLEF 603

Query: 9   SE 4
           S+
Sbjct: 604 SQ 605


>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
            gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
            pms2, putative [Ricinus communis]
          Length = 924

 Score = 79.0 bits (193), Expect = 5e-13
 Identities = 61/189 (32%), Positives = 94/189 (49%), Gaps = 2/189 (1%)
 Frame = -3

Query: 564  EIVQCQVSKTNSDMQPDLSKSLVDHCQVDGCPDVLGKESSRCFKGTLVSKEVESPSGAEG 385
            + +Q  ++K+NS++   ++ S  +H  +D   +V   E S+      +  +V + +   G
Sbjct: 515  QTLQRPLNKSNSEVNAAVTGSPFNHHHIDDSLEVSDIEVSKFPTAEKIFSKVRNSASYRG 574

Query: 384  DVNVKGFEEVALLLGGQTVHHTKGDLEFGMRLPHIDEVTSRALVGKDLENISEEISGSVP 205
              N            G+     K D E   +L  I +V       + LEN+SE++  + P
Sbjct: 575  HTN-----------DGKP----KDDSEGAEKLSFIADVAPDTSPSRGLENMSEDLILTAP 619

Query: 204  PSKSSEMPLDAPVQSHRSEICSILQFNIRDLRTSREKRLARLQSSGSMHG--KTNSKRCY 31
            P +SS   LD P  S   EICS LQFN ++L+  R++R + LQ SG   G  K  S R Y
Sbjct: 620  PLQSSSALLDVPKPSAH-EICSTLQFNFQELKAKRQQRRSILQFSGYASGGMKMKSHRTY 678

Query: 30   AAATLELSE 4
            AAATLELS+
Sbjct: 679  AAATLELSQ 687


>ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|222861786|gb|EEE99328.1|
            predicted protein [Populus trichocarpa]
          Length = 915

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 1/185 (0%)
 Frame = -3

Query: 555  QCQVSKTNSDMQPDLSKSLVDHCQVDGCPDVLGKESSRCFKGTLVSKEVESPSGAEGDVN 376
            +CQ+ K++ D+   ++  L +H  +D   +    E  +     ++  +  + SG      
Sbjct: 514  ECQLKKSDIDIHDAVTSLLFNHHHIDDSTEFTDAEPPKHHSTDVIINKTRNNSG------ 567

Query: 375  VKGFEEVALLLGGQTVHHTKGDLEFGMRLPHIDEVTSRALVGKDLENISEEISGSVPPSK 196
                      L  +      G+          D+V S     K L N+ E++  + PP++
Sbjct: 568  ----------LQPKLAEDPSGEQNSSSP----DDVPSITTPCKGLGNLLEDLPVASPPAQ 613

Query: 195  SSEMPLDAPVQSHRSEICSILQFNIRDLRTSREKRLARLQSSG-SMHGKTNSKRCYAAAT 19
            SS   LDAPV     +ICS LQF+ +DL + R +RL+RLQS   +  G   S R YAAAT
Sbjct: 614  SSIELLDAPVPFSAQQICSTLQFSFQDLHSRRMQRLSRLQSGKFTFGGSKRSHRSYAAAT 673

Query: 18   LELSE 4
            LELS+
Sbjct: 674  LELSQ 678


>ref|XP_002872835.1| hypothetical protein ARALYDRAFT_490319 [Arabidopsis lyrata subsp.
            lyrata] gi|297318672|gb|EFH49094.1| hypothetical protein
            ARALYDRAFT_490319 [Arabidopsis lyrata subsp. lyrata]
          Length = 923

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 3/185 (1%)
 Frame = -3

Query: 549  QVSKTNSDMQPDLSKSLVDHCQVDGCPDVLGKESSRCFKGTLVSKEVESPSGAEGDVNVK 370
            +V K+  +++   S+ L++  QVDG                 +SKE  +P+  + ++  +
Sbjct: 516  RVEKSKFEVRALASRCLMEGDQVDGMD---------------ISKEDMTPNEMDSELGNQ 560

Query: 369  GFEEVALLLGGQTVHHTKGDLEFGMRLPHIDEVTSRALVGKDLENISEEISGSVPPSKSS 190
                  +  G QT +  + + E    +   +  +   L   D+E ISE+  G   P +S 
Sbjct: 561  ------IAPGTQTDNTERHEREHEKPICFEEPTSDNTLTKGDVERISEDNPGCSQPLRSV 614

Query: 189  EMPLDAPVQSHRSEICSILQFNIRDLRTSREKRLARLQSSGSMHGKTNS---KRCYAAAT 19
               LD+P QS   ++ S L+F+ ++LR  R +RL+RLQS+G +    N+   K+C+AAAT
Sbjct: 615  ATVLDSPAQSTGPKMFSTLEFSFQNLRERRLERLSRLQSTGYVSKCMNTPRPKKCFAAAT 674

Query: 18   LELSE 4
            LELS+
Sbjct: 675  LELSQ 679


Top