BLASTX nr result

ID: Papaver23_contig00022762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00022762
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-a...   211   7e-53
emb|CBI17093.3| unnamed protein product [Vitis vinifera]              211   7e-53
ref|XP_002270098.1| PREDICTED: putative SWI/SNF-related matrix-a...   211   7e-53
ref|XP_002527439.1| DNA repair helicase rad5,16, putative [Ricin...   209   3e-52
ref|NP_197667.1| DNA/RNA helicase protein RAD5 [Arabidopsis thal...   206   3e-51

>ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like [Vitis vinifera]
          Length = 1029

 Score =  211 bits (537), Expect = 7e-53
 Identities = 110/178 (61%), Positives = 129/178 (72%)
 Frame = -3

Query: 537 GSEWWLIGSTELAGLSTCKGRKLKVGEEVEXXXXXXXXXXXXXXXXXKVFGKGKQAAPAC 358
           GSEWW +  +ELAGLSTCKGR++K G+EV                  K+ G+G+Q   AC
Sbjct: 110 GSEWWFLNCSELAGLSTCKGRRMKSGDEV--FFTFPLKKSPNSPSPGKLTGRGRQMG-AC 166

Query: 357 SEIVRFSTKDSGEIGRIPNEWGRCLFPLVKDKKVRIEGRCKFAPGVLAIMDSILLSVSVY 178
           SEIVRFSTK+SGE+GRIPNEW RCL PLV+DKKV+IEG CK AP VL IMD+ILLS+SVY
Sbjct: 167 SEIVRFSTKESGEVGRIPNEWARCLLPLVRDKKVKIEGFCKAAPDVLGIMDTILLSISVY 226

Query: 177 INSSMFRKCHQTSLKATRTSAEESVVHXXXXXXXXXXXXPFKKAELTPEDLYSRKRPL 4
           INSSMFRKC QTSL+A   S+EESVVH            PFKKAE +P+DLY+RKRPL
Sbjct: 227 INSSMFRKCQQTSLRAASNSSEESVVHALPTLFRLLGLTPFKKAEFSPDDLYTRKRPL 284


>emb|CBI17093.3| unnamed protein product [Vitis vinifera]
          Length = 1025

 Score =  211 bits (537), Expect = 7e-53
 Identities = 110/178 (61%), Positives = 129/178 (72%)
 Frame = -3

Query: 537 GSEWWLIGSTELAGLSTCKGRKLKVGEEVEXXXXXXXXXXXXXXXXXKVFGKGKQAAPAC 358
           GSEWW +  +ELAGLSTCKGR++K G+EV                  K+ G+G+Q   AC
Sbjct: 106 GSEWWFLNCSELAGLSTCKGRRMKSGDEV--FFTFPLKKSPNSPSPGKLTGRGRQMG-AC 162

Query: 357 SEIVRFSTKDSGEIGRIPNEWGRCLFPLVKDKKVRIEGRCKFAPGVLAIMDSILLSVSVY 178
           SEIVRFSTK+SGE+GRIPNEW RCL PLV+DKKV+IEG CK AP VL IMD+ILLS+SVY
Sbjct: 163 SEIVRFSTKESGEVGRIPNEWARCLLPLVRDKKVKIEGFCKAAPDVLGIMDTILLSISVY 222

Query: 177 INSSMFRKCHQTSLKATRTSAEESVVHXXXXXXXXXXXXPFKKAELTPEDLYSRKRPL 4
           INSSMFRKC QTSL+A   S+EESVVH            PFKKAE +P+DLY+RKRPL
Sbjct: 223 INSSMFRKCQQTSLRAASNSSEESVVHALPTLFRLLGLTPFKKAEFSPDDLYTRKRPL 280


>ref|XP_002270098.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like isoform 2 [Vitis vinifera]
          Length = 1016

 Score =  211 bits (537), Expect = 7e-53
 Identities = 110/178 (61%), Positives = 129/178 (72%)
 Frame = -3

Query: 537 GSEWWLIGSTELAGLSTCKGRKLKVGEEVEXXXXXXXXXXXXXXXXXKVFGKGKQAAPAC 358
           GSEWW +  +ELAGLSTCKGR++K G+EV                  K+ G+G+Q   AC
Sbjct: 97  GSEWWFLNCSELAGLSTCKGRRMKSGDEV--FFTFPLKKSPNSPSPGKLTGRGRQMG-AC 153

Query: 357 SEIVRFSTKDSGEIGRIPNEWGRCLFPLVKDKKVRIEGRCKFAPGVLAIMDSILLSVSVY 178
           SEIVRFSTK+SGE+GRIPNEW RCL PLV+DKKV+IEG CK AP VL IMD+ILLS+SVY
Sbjct: 154 SEIVRFSTKESGEVGRIPNEWARCLLPLVRDKKVKIEGFCKAAPDVLGIMDTILLSISVY 213

Query: 177 INSSMFRKCHQTSLKATRTSAEESVVHXXXXXXXXXXXXPFKKAELTPEDLYSRKRPL 4
           INSSMFRKC QTSL+A   S+EESVVH            PFKKAE +P+DLY+RKRPL
Sbjct: 214 INSSMFRKCQQTSLRAASNSSEESVVHALPTLFRLLGLTPFKKAEFSPDDLYTRKRPL 271


>ref|XP_002527439.1| DNA repair helicase rad5,16, putative [Ricinus communis]
           gi|223533174|gb|EEF34931.1| DNA repair helicase rad5,16,
           putative [Ricinus communis]
          Length = 1028

 Score =  209 bits (531), Expect = 3e-52
 Identities = 108/180 (60%), Positives = 124/180 (68%)
 Frame = -3

Query: 540 DGSEWWLIGSTELAGLSTCKGRKLKVGEEVEXXXXXXXXXXXXXXXXXKVFGKGKQAAPA 361
           +GSEWW  GS ++AGLST KGRKLK G+ V                  K FGKG+Q A A
Sbjct: 104 NGSEWWYAGSGDVAGLSTSKGRKLKAGDGVIFTFPLKSSNTSNSPSQGKAFGKGRQPATA 163

Query: 360 CSEIVRFSTKDSGEIGRIPNEWGRCLFPLVKDKKVRIEGRCKFAPGVLAIMDSILLSVSV 181
           CSEIVRFST+DSGE+GRIPNEW RCL PLV+ KKVRIEG CK AP +L IMD+ILLS+SV
Sbjct: 164 CSEIVRFSTRDSGEVGRIPNEWARCLLPLVRYKKVRIEGYCKSAPDILGIMDTILLSISV 223

Query: 180 YINSSMFRKCHQTSLKATRTSAEESVVHXXXXXXXXXXXXPFKKAELTPEDLYSRKRPLN 1
           YINS++FR   QTSLKA     EE++VH            PFKKAE TP DLY+RKRPLN
Sbjct: 224 YINSALFRMHQQTSLKAVSNPTEETIVHPLPNLFRLLGLTPFKKAEFTPADLYTRKRPLN 283


>ref|NP_197667.1| DNA/RNA helicase protein RAD5 [Arabidopsis thaliana]
           gi|60390961|sp|Q9FNI6.1|SM3L2_ARATH RecName:
           Full=Putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2; Short=SMARCA3-like protein 2
           gi|10178249|dbj|BAB11681.1| DNA repair protein RAD5
           protein [Arabidopsis thaliana]
           gi|110737306|dbj|BAF00599.1| hypothetical protein
           [Arabidopsis thaliana] gi|332005687|gb|AED93070.1|
           DNA/RNA helicase protein RAD5 [Arabidopsis thaliana]
          Length = 1029

 Score =  206 bits (523), Expect = 3e-51
 Identities = 105/179 (58%), Positives = 123/179 (68%)
 Frame = -3

Query: 537 GSEWWLIGSTELAGLSTCKGRKLKVGEEVEXXXXXXXXXXXXXXXXXKVFGKGKQAAPAC 358
           G+EWW +G +ELAGLSTCKGRKLK G+E+                  + FG+G+ A    
Sbjct: 107 GNEWWFVGCSELAGLSTCKGRKLKSGDELVFTFPHSKGLKPETTPGKRGFGRGRPALRGA 166

Query: 357 SEIVRFSTKDSGEIGRIPNEWGRCLFPLVKDKKVRIEGRCKFAPGVLAIMDSILLSVSVY 178
           S+IVRFSTKDSGEIGRIPNEW RCL PLV+DKK+RIEG CK AP  L+IMD+ILLSVSVY
Sbjct: 167 SDIVRFSTKDSGEIGRIPNEWARCLLPLVRDKKIRIEGSCKSAPEALSIMDTILLSVSVY 226

Query: 177 INSSMFRKCHQTSLKATRTSAEESVVHXXXXXXXXXXXXPFKKAELTPEDLYSRKRPLN 1
           INSSMF+K   TS K    +AEES+ H            PFKKAE TPED YS+KRPL+
Sbjct: 227 INSSMFQKHSATSFKTASNTAEESMFHPLPNLFRLLGLIPFKKAEFTPEDFYSKKRPLS 285


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