BLASTX nr result

ID: Papaver23_contig00022743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00022743
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268463.1| PREDICTED: 50S ribosomal protein L20 [Vitis ...   219   6e-55
ref|NP_001151809.1| 50S ribosomal protein L20 [Zea mays] gi|2269...   218   2e-54
gb|EAY98774.1| hypothetical protein OsI_20708 [Oryza sativa Indi...   218   2e-54
ref|XP_003568051.1| PREDICTED: 50S ribosomal protein L20-like [B...   217   3e-54
ref|XP_004139908.1| PREDICTED: 50S ribosomal protein L20-like is...   216   4e-54

>ref|XP_002268463.1| PREDICTED: 50S ribosomal protein L20 [Vitis vinifera]
           gi|147832535|emb|CAN74888.1| hypothetical protein
           VITISV_041868 [Vitis vinifera]
           gi|296087520|emb|CBI34109.3| unnamed protein product
           [Vitis vinifera]
          Length = 125

 Score =  219 bits (558), Expect = 6e-55
 Identities = 107/126 (84%), Positives = 118/126 (93%)
 Frame = +3

Query: 162 MNKKKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRTKKRDMRSLWIERINAGSRL 341
           MNK KIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRTKKRDMRSLWIERINAGSRL
Sbjct: 1   MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRTKKRDMRSLWIERINAGSRL 60

Query: 342 HGVNYGNFMHGLIKENIQLNRKVLSEISMHEPYSFKALVDVSRQAFPGNKKIAEAAPKKQ 521
           HGVNY NF+HGL+KENIQLNRKVLSE+SMHEPY+FKALVD+S+ AFPGNKK A   P+K+
Sbjct: 61  HGVNYNNFIHGLMKENIQLNRKVLSELSMHEPYTFKALVDISQNAFPGNKK-AVLPPRKE 119

Query: 522 GLQLLL 539
           G+ ++L
Sbjct: 120 GISVVL 125


>ref|NP_001151809.1| 50S ribosomal protein L20 [Zea mays]
           gi|226958655|ref|NP_001152923.1| LOC100280565 [Zea mays]
           gi|242091177|ref|XP_002441421.1| hypothetical protein
           SORBIDRAFT_09g026330 [Sorghum bicolor]
           gi|195605838|gb|ACG24749.1| 50S ribosomal protein L20
           [Zea mays] gi|195649829|gb|ACG44382.1| 50S ribosomal
           protein L20 [Zea mays] gi|241946706|gb|EES19851.1|
           hypothetical protein SORBIDRAFT_09g026330 [Sorghum
           bicolor] gi|413949894|gb|AFW82543.1| 50S ribosomal
           protein L20 isoform 1 [Zea mays]
           gi|413949895|gb|AFW82544.1| 50S ribosomal protein L20
           isoform 2 [Zea mays]
          Length = 122

 Score =  218 bits (554), Expect = 2e-54
 Identities = 108/126 (85%), Positives = 115/126 (91%)
 Frame = +3

Query: 162 MNKKKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRTKKRDMRSLWIERINAGSRL 341
           MNK KIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRR KKRDMRSLWIERINAG+RL
Sbjct: 1   MNKGKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGTRL 60

Query: 342 HGVNYGNFMHGLIKENIQLNRKVLSEISMHEPYSFKALVDVSRQAFPGNKKIAEAAPKKQ 521
           HGVNYGNFMHGL+KENIQLNRKVLSE+SMHEPYSFKALVDVSR AFPGN+ +    P K+
Sbjct: 61  HGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSRNAFPGNRPV----PAKE 116

Query: 522 GLQLLL 539
           GL  +L
Sbjct: 117 GLASIL 122


>gb|EAY98774.1| hypothetical protein OsI_20708 [Oryza sativa Indica Group]
           gi|222632308|gb|EEE64440.1| hypothetical protein
           OsJ_19285 [Oryza sativa Japonica Group]
          Length = 151

 Score =  218 bits (554), Expect = 2e-54
 Identities = 108/127 (85%), Positives = 116/127 (91%)
 Frame = +3

Query: 159 KMNKKKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRTKKRDMRSLWIERINAGSR 338
           KMNK KIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRR KKRDMRSLWIERINAG+R
Sbjct: 30  KMNKGKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGTR 89

Query: 339 LHGVNYGNFMHGLIKENIQLNRKVLSEISMHEPYSFKALVDVSRQAFPGNKKIAEAAPKK 518
           +HGVNYGNFMHGL+KENIQLNRKVLSE+SMHEPYSFKALVDVSR AFPGN+ +     KK
Sbjct: 90  IHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSRTAFPGNRPV-----KK 144

Query: 519 QGLQLLL 539
           +GL  +L
Sbjct: 145 EGLASIL 151


>ref|XP_003568051.1| PREDICTED: 50S ribosomal protein L20-like [Brachypodium distachyon]
          Length = 121

 Score =  217 bits (552), Expect = 3e-54
 Identities = 107/126 (84%), Positives = 115/126 (91%)
 Frame = +3

Query: 162 MNKKKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRTKKRDMRSLWIERINAGSRL 341
           MNK KIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRR KKRDMRSLWIERINAG+RL
Sbjct: 1   MNKGKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGTRL 60

Query: 342 HGVNYGNFMHGLIKENIQLNRKVLSEISMHEPYSFKALVDVSRQAFPGNKKIAEAAPKKQ 521
           HGVNYGNFMHGL+KEN+QLNRKVLSE+SMHEPYSFKALVDVSR AFPGN+ +     KK+
Sbjct: 61  HGVNYGNFMHGLVKENVQLNRKVLSELSMHEPYSFKALVDVSRTAFPGNRPV-----KKE 115

Query: 522 GLQLLL 539
           GL  +L
Sbjct: 116 GLASIL 121


>ref|XP_004139908.1| PREDICTED: 50S ribosomal protein L20-like isoform 1 [Cucumis
           sativus] gi|449444292|ref|XP_004139909.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 2 [Cucumis sativus]
           gi|449444294|ref|XP_004139910.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 3 [Cucumis sativus]
           gi|449444296|ref|XP_004139911.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 4 [Cucumis sativus]
           gi|449475856|ref|XP_004154571.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 1 [Cucumis sativus]
           gi|449475859|ref|XP_004154572.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 2 [Cucumis sativus]
           gi|449475863|ref|XP_004154573.1| PREDICTED: 50S
           ribosomal protein L20-like isoform 3 [Cucumis sativus]
          Length = 125

 Score =  216 bits (551), Expect = 4e-54
 Identities = 105/126 (83%), Positives = 114/126 (90%)
 Frame = +3

Query: 162 MNKKKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRTKKRDMRSLWIERINAGSRL 341
           MNK KIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRR KKRDMRSLWI+RINAG+RL
Sbjct: 1   MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRL 60

Query: 342 HGVNYGNFMHGLIKENIQLNRKVLSEISMHEPYSFKALVDVSRQAFPGNKKIAEAAPKKQ 521
           HGVNYGNFMHGL+KEN+QLNRKVLSEISMHEPYSFKALVD+SR AFPGNK +    PKK 
Sbjct: 61  HGVNYGNFMHGLMKENVQLNRKVLSEISMHEPYSFKALVDISRNAFPGNKNVV-FPPKKD 119

Query: 522 GLQLLL 539
              +++
Sbjct: 120 AASMIV 125


Top