BLASTX nr result

ID: Papaver23_contig00022376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00022376
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19401.3| unnamed protein product [Vitis vinifera]               68   7e-10
ref|XP_002285324.1| PREDICTED: DNA excision repair protein ERCC-...    68   7e-10
ref|XP_003525938.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision...    67   1e-09
gb|AFK36159.1| unknown [Medicago truncatula]                           65   7e-09
ref|XP_002510095.1| WD-repeat protein, putative [Ricinus communi...    60   2e-07

>emb|CBI19401.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
 Frame = -1

Query: 459 WFNSQDQEMYTGSNDRQIIVWSPPKIRLDEMDEGRNNE----QDQDCWSD 322
           W + QDQE+YTG NDRQI+VWSP ++  DEMD G   E    QDQD WSD
Sbjct: 409 WLSLQDQELYTGGNDRQILVWSPSRLNFDEMDHGSREEPIHAQDQDNWSD 458


>ref|XP_002285324.1| PREDICTED: DNA excision repair protein ERCC-8-like [Vitis vinifera]
          Length = 450

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
 Frame = -1

Query: 459 WFNSQDQEMYTGSNDRQIIVWSPPKIRLDEMDEGRNNE----QDQDCWSD 322
           W + QDQE+YTG NDRQI+VWSP ++  DEMD G   E    QDQD WSD
Sbjct: 401 WLSLQDQELYTGGNDRQILVWSPSRLNFDEMDHGSREEPIHAQDQDNWSD 450


>ref|XP_003525938.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein
           ERCC-8-like [Glycine max]
          Length = 466

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/45 (66%), Positives = 34/45 (75%)
 Frame = -1

Query: 459 WFNSQDQEMYTGSNDRQIIVWSPPKIRLDEMDEGRNNEQDQDCWS 325
           WFN QDQE+YTG NDRQI+VWSP +   DEMDEG    +DQD WS
Sbjct: 423 WFNQQDQELYTGGNDRQILVWSPARSMADEMDEG--PAEDQDNWS 465


>gb|AFK36159.1| unknown [Medicago truncatula]
          Length = 184

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 29/46 (63%), Positives = 33/46 (71%)
 Frame = -1

Query: 459 WFNSQDQEMYTGSNDRQIIVWSPPKIRLDEMDEGRNNEQDQDCWSD 322
           WFN QDQE+YTG NDRQI VWSP +   DEM EG  +  DQD WS+
Sbjct: 141 WFNQQDQELYTGGNDRQIFVWSPARSIADEMGEG--DPDDQDSWSN 184


>ref|XP_002510095.1| WD-repeat protein, putative [Ricinus communis]
           gi|223550796|gb|EEF52282.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 479

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/46 (60%), Positives = 35/46 (76%)
 Frame = -1

Query: 459 WFNSQDQEMYTGSNDRQIIVWSPPKIRLDEMDEGRNNEQDQDCWSD 322
           W++SQDQE+YTG NDRQI+VW PP  RL +M+ G    +DQD WSD
Sbjct: 438 WYSSQDQEIYTGGNDRQILVWCPP--RLIDMETG--PAEDQDNWSD 479


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