BLASTX nr result

ID: Papaver23_contig00022375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00022375
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19401.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_002285324.1| PREDICTED: DNA excision repair protein ERCC-...    77   2e-12
ref|XP_003525938.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision...    72   5e-11
gb|AFK36159.1| unknown [Medicago truncatula]                           70   2e-10
ref|XP_002510095.1| WD-repeat protein, putative [Ricinus communi...    68   9e-10

>emb|CBI19401.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 33/52 (63%), Positives = 38/52 (73%), Gaps = 4/52 (7%)
 Frame = +3

Query: 3   CCWFNSQDQEMYTGSNDRQILVWSPPKIRLDEMDEGRNDE----QDQDCWSD 146
           CCW + QDQE+YTG NDRQILVWSP ++  DEMD G  +E    QDQD WSD
Sbjct: 407 CCWLSLQDQELYTGGNDRQILVWSPSRLNFDEMDHGSREEPIHAQDQDNWSD 458


>ref|XP_002285324.1| PREDICTED: DNA excision repair protein ERCC-8-like [Vitis vinifera]
          Length = 450

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 33/52 (63%), Positives = 38/52 (73%), Gaps = 4/52 (7%)
 Frame = +3

Query: 3   CCWFNSQDQEMYTGSNDRQILVWSPPKIRLDEMDEGRNDE----QDQDCWSD 146
           CCW + QDQE+YTG NDRQILVWSP ++  DEMD G  +E    QDQD WSD
Sbjct: 399 CCWLSLQDQELYTGGNDRQILVWSPSRLNFDEMDHGSREEPIHAQDQDNWSD 450


>ref|XP_003525938.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein
           ERCC-8-like [Glycine max]
          Length = 466

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/46 (69%), Positives = 35/46 (76%)
 Frame = +3

Query: 6   CWFNSQDQEMYTGSNDRQILVWSPPKIRLDEMDEGRNDEQDQDCWS 143
           CWFN QDQE+YTG NDRQILVWSP +   DEMDEG    +DQD WS
Sbjct: 422 CWFNQQDQELYTGGNDRQILVWSPARSMADEMDEG--PAEDQDNWS 465


>gb|AFK36159.1| unknown [Medicago truncatula]
          Length = 184

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/47 (65%), Positives = 34/47 (72%)
 Frame = +3

Query: 6   CWFNSQDQEMYTGSNDRQILVWSPPKIRLDEMDEGRNDEQDQDCWSD 146
           CWFN QDQE+YTG NDRQI VWSP +   DEM EG  D  DQD WS+
Sbjct: 140 CWFNQQDQELYTGGNDRQIFVWSPARSIADEMGEG--DPDDQDSWSN 184


>ref|XP_002510095.1| WD-repeat protein, putative [Ricinus communis]
           gi|223550796|gb|EEF52282.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 479

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/48 (64%), Positives = 37/48 (77%)
 Frame = +3

Query: 3   CCWFNSQDQEMYTGSNDRQILVWSPPKIRLDEMDEGRNDEQDQDCWSD 146
           CCW++SQDQE+YTG NDRQILVW PP  RL +M+ G    +DQD WSD
Sbjct: 436 CCWYSSQDQEIYTGGNDRQILVWCPP--RLIDMETG--PAEDQDNWSD 479


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