BLASTX nr result

ID: Papaver23_contig00022249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00022249
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002981870.1| hypothetical protein SELMODRAFT_115640 [Sela...    83   3e-14
sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Sh...    82   6e-14
ref|XP_002981964.1| hypothetical protein SELMODRAFT_421330 [Sela...    80   2e-13
ref|XP_002981963.1| hypothetical protein SELMODRAFT_115572 [Sela...    80   2e-13
pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimi...    79   3e-13

>ref|XP_002981870.1| hypothetical protein SELMODRAFT_115640 [Selaginella moellendorffii]
           gi|300150312|gb|EFJ16963.1| hypothetical protein
           SELMODRAFT_115640 [Selaginella moellendorffii]
          Length = 84

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
 Frame = -2

Query: 389 LVTSNASTFTAWNGPRCTGSRDIYR-CGCNNI--RYHGGFSFDYTGEHARFYSRSGCTGS 219
           ++T+NAS F AW GP C    + YR CGCNN+    HGG+SF Y G+ A  Y+ + C G 
Sbjct: 1   MITANASFFDAWAGPGCNNRLERYRACGCNNVGASQHGGYSFAYQGQTAAAYNTANCRGV 60

Query: 218 ILARFTQDRRQCSSFPWGSIFIAC 147
              RF+   + CS F W SIFI C
Sbjct: 61  AHTRFSSSVQDCSGFGWRSIFIQC 84


>sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Short=AMP1; AltName:
           Full=MiAMP1; Flags: Precursor gi|2181943|emb|CAA71842.1|
           AMP1 [Macadamia integrifolia]
          Length = 102

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
 Frame = -2

Query: 377 NASTFTAWNGPRCTGSRDIY-RCGCNNIRYHGGFSFDYTGEHARFYSRSGCTGSILARFT 201
           N S FT W+GP C    + Y +CGC+ I   GG+ F YTG+ A  Y+++GC+G    RF 
Sbjct: 25  NGSAFTVWSGPGCNNRAERYSKCGCSAIHQKGGYDFSYTGQTAALYNQAGCSGVAHTRFG 84

Query: 200 QDRRQCSSFPWGSIFIAC 147
              R C+ F W SIFI C
Sbjct: 85  SSARACNPFGWKSIFIQC 102


>ref|XP_002981964.1| hypothetical protein SELMODRAFT_421330 [Selaginella moellendorffii]
           gi|302800415|ref|XP_002981965.1| hypothetical protein
           SELMODRAFT_421331 [Selaginella moellendorffii]
           gi|300150406|gb|EFJ17057.1| hypothetical protein
           SELMODRAFT_421330 [Selaginella moellendorffii]
           gi|300150407|gb|EFJ17058.1| hypothetical protein
           SELMODRAFT_421331 [Selaginella moellendorffii]
          Length = 101

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
 Frame = -2

Query: 395 GALVTSNASTFTAWNGPRCTGSRDIYR-CGCNNI--RYHGGFSFDYTGEHARFYSRSGCT 225
           G+++T+NAS F  W GP C   R  Y  CGC N+    HGG+SF Y G+ A  Y+ + C 
Sbjct: 16  GSMITANASYFDTWAGPGCNNQRVRYSACGCTNVGASQHGGYSFGYQGQTAAAYNTANCQ 75

Query: 224 GSILARFTQDRRQCSSFPWGSIFIAC 147
           G    RF+   + CS F W S FI C
Sbjct: 76  GVAQTRFSASVQDCSGFGWNSFFIQC 101


>ref|XP_002981963.1| hypothetical protein SELMODRAFT_115572 [Selaginella moellendorffii]
           gi|302802373|ref|XP_002982941.1| hypothetical protein
           SELMODRAFT_117067 [Selaginella moellendorffii]
           gi|302802375|ref|XP_002982942.1| hypothetical protein
           SELMODRAFT_117256 [Selaginella moellendorffii]
           gi|302802379|ref|XP_002982944.1| hypothetical protein
           SELMODRAFT_117223 [Selaginella moellendorffii]
           gi|302802383|ref|XP_002982946.1| hypothetical protein
           SELMODRAFT_117375 [Selaginella moellendorffii]
           gi|302802385|ref|XP_002982947.1| hypothetical protein
           SELMODRAFT_117309 [Selaginella moellendorffii]
           gi|300149531|gb|EFJ16186.1| hypothetical protein
           SELMODRAFT_117067 [Selaginella moellendorffii]
           gi|300149532|gb|EFJ16187.1| hypothetical protein
           SELMODRAFT_117256 [Selaginella moellendorffii]
           gi|300149534|gb|EFJ16189.1| hypothetical protein
           SELMODRAFT_117223 [Selaginella moellendorffii]
           gi|300149536|gb|EFJ16191.1| hypothetical protein
           SELMODRAFT_117375 [Selaginella moellendorffii]
           gi|300149537|gb|EFJ16192.1| hypothetical protein
           SELMODRAFT_117309 [Selaginella moellendorffii]
           gi|300150405|gb|EFJ17056.1| hypothetical protein
           SELMODRAFT_115572 [Selaginella moellendorffii]
          Length = 97

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
 Frame = -2

Query: 395 GALVTSNASTFTAWNGPRCTGSRDIYR-CGCNNI--RYHGGFSFDYTGEHARFYSRSGCT 225
           G+++T+NAS F  W GP C   R  Y  CGC N+    HGG+SF Y G+ A  Y+ + C 
Sbjct: 12  GSMITANASYFDTWAGPGCNNQRVRYSACGCTNVGASQHGGYSFGYQGQTAAAYNTANCQ 71

Query: 224 GSILARFTQDRRQCSSFPWGSIFIAC 147
           G    RF+   + CS F W S FI C
Sbjct: 72  GVAQTRFSASVQDCSGFGWNSFFIQC 97


>pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimicrobial
           Protein
          Length = 76

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
 Frame = -2

Query: 371 STFTAWNGPRCTGSRDIY-RCGCNNIRYHGGFSFDYTGEHARFYSRSGCTGSILARFTQD 195
           S FT W+GP C    + Y +CGC+ I   GG+ F YTG+ A  Y+++GC+G    RF   
Sbjct: 1   SAFTVWSGPGCNNRAERYSKCGCSAIHQKGGYDFSYTGQTAALYNQAGCSGVAHTRFGSS 60

Query: 194 RRQCSSFPWGSIFIAC 147
            R C+ F W SIFI C
Sbjct: 61  ARACNPFGWKSIFIQC 76


Top