BLASTX nr result

ID: Papaver23_contig00022003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00022003
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-contain...   236   3e-60
ref|XP_002525350.1| DNA binding protein, putative [Ricinus commu...   231   1e-58
ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...   229   6e-58
ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...   227   2e-57
emb|CBI32139.3| unnamed protein product [Vitis vinifera]              220   2e-55

>ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2060

 Score =  236 bits (603), Expect = 3e-60
 Identities = 123/223 (55%), Positives = 156/223 (69%), Gaps = 7/223 (3%)
 Frame = +3

Query: 9    EIPKAPWDDGVCRLCGIDKSDETVLLCDHCDSEYHTYCLIPPLLKIPIGNWYCPTCIESG 188
            EIPKAPWD+G+C++CG+DK D+ VLLCD CDSEYHTYCL PPL +IP GNWYCP+C+ + 
Sbjct: 1032 EIPKAPWDEGLCKVCGVDKDDDNVLLCDACDSEYHTYCLNPPLARIPEGNWYCPSCVAAQ 1091

Query: 189  EVK--APPDTHVIHQRRRKRYQGEGTRIFSETLNKLAAVMEEKEYWDCSLEERVFLLKFL 362
             +         V  + RRKRYQGE TR + ETL  LA +ME KEY + S+EERVFLLKF 
Sbjct: 1092 RLSQGTSRSAEVFSRCRRKRYQGEFTRTYLETLTHLATIMEIKEYCELSIEERVFLLKFF 1151

Query: 363  SDEVLNSSIVREHLDQCAEMSADVQQKLHSFSVELRNLKYKVEVLT----KESRGMLNGV 530
             +EVLNS+I+REHL+QCA +SAD+QQKL + S+E RNLK + E+L     K +   L+GV
Sbjct: 1152 CEEVLNSAIIREHLEQCASLSADLQQKLRTLSLERRNLKLREEILAVKVEKANSVGLDGV 1211

Query: 531  -GETGKEAVASMLLNLSRGFGQHQTLNSSYNFCTSFSGMIAEE 656
             GE G EAVA ML N S+     Q LN S  F +  S +++ E
Sbjct: 1212 GGEAGTEAVAMMLKNYSK--LMVQPLNKSNYFASFPSNLVSLE 1252


>ref|XP_002525350.1| DNA binding protein, putative [Ricinus communis]
            gi|223535313|gb|EEF36988.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 1794

 Score =  231 bits (588), Expect = 1e-58
 Identities = 112/201 (55%), Positives = 141/201 (70%)
 Frame = +3

Query: 9    EIPKAPWDDGVCRLCGIDKSDETVLLCDHCDSEYHTYCLIPPLLKIPIGNWYCPTCIESG 188
            ++PKAPWD+GVC++CG+DK D+ VLLCD CDS YHTYCL PPL +IP GNWYCP+CI  G
Sbjct: 908  QMPKAPWDEGVCKVCGVDKDDDNVLLCDKCDSGYHTYCLNPPLARIPEGNWYCPSCITQG 967

Query: 189  EVKAPPDTHVIHQRRRKRYQGEGTRIFSETLNKLAAVMEEKEYWDCSLEERVFLLKFLSD 368
              + P     +   R+KR QGE T    E L  L   ME  +YWD S+EER+FLLKFL D
Sbjct: 968  ASQVP---QFVSHCRKKRRQGEFTHGVLEALAHLGTTMEITDYWDYSVEERIFLLKFLGD 1024

Query: 369  EVLNSSIVREHLDQCAEMSADVQQKLHSFSVELRNLKYKVEVLTKESRGMLNGVGETGKE 548
            EVLNS+ +REHLDQCA +SAD+QQKL S S+E RNLK+K E+       MLNGVG++GKE
Sbjct: 1025 EVLNSANIREHLDQCASVSADLQQKLRSLSMEWRNLKFKEEL-------MLNGVGKSGKE 1077

Query: 549  AVASMLLNLSRGFGQHQTLNS 611
               ++L N  +  GQ  + +S
Sbjct: 1078 GTTTVLPNYDKLLGQTHSRSS 1098


>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
            gi|223543360|gb|EEF44891.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2145

 Score =  229 bits (583), Expect = 6e-58
 Identities = 111/207 (53%), Positives = 142/207 (68%), Gaps = 1/207 (0%)
 Frame = +3

Query: 9    EIPKAPWDDGVCRLCGIDKSDETVLLCDHCDSEYHTYCLIPPLLKIPIGNWYCPTCIESG 188
            EIPKAPWD+GVC++CG DK D++VLLCD CD+EYHTYCL PPL +IP GNWYCP+C+   
Sbjct: 1212 EIPKAPWDEGVCKVCGFDKDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVSVR 1271

Query: 189  EVK-APPDTHVIHQRRRKRYQGEGTRIFSETLNKLAAVMEEKEYWDCSLEERVFLLKFLS 365
             V+ A   T VI Q   K+YQGE TRI+ ETL  LA+ MEEK+YWD  ++ER FLLKFL 
Sbjct: 1272 MVQEASVSTQVIGQNSCKKYQGEMTRIYLETLVHLASAMEEKDYWDFGVDERTFLLKFLC 1331

Query: 366  DEVLNSSIVREHLDQCAEMSADVQQKLHSFSVELRNLKYKVEVLTKESRGMLNGVGETGK 545
            DE+LNS++VR+HL+QC E +A+VQQKL +   E +NLK K E +  +S  M  G     K
Sbjct: 1332 DELLNSALVRQHLEQCMESTAEVQQKLRTLYAEWKNLKSKEEFMALKSAKMGTGASGEVK 1391

Query: 546  EAVASMLLNLSRGFGQHQTLNSSYNFC 626
            E + S L +  +  GQ   L    + C
Sbjct: 1392 EGLVSALKDQGKSVGQPPVLGDKPSDC 1418


>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2164

 Score =  227 bits (578), Expect = 2e-57
 Identities = 112/206 (54%), Positives = 145/206 (70%), Gaps = 6/206 (2%)
 Frame = +3

Query: 9    EIPKAPWDDGVCRLCGIDKSDETVLLCDHCDSEYHTYCLIPPLLKIPIGNWYCPTCIES- 185
            EIPKAPWD+GVC++CGIDK D++VLLCD CD+EYHTYCL PPL +IP GNWYCP+C+   
Sbjct: 1210 EIPKAPWDEGVCKVCGIDKDDDSVLLCDMCDAEYHTYCLNPPLARIPEGNWYCPSCVAGI 1269

Query: 186  GEVKAPPDTHVIHQRRRKRYQGEGTRIFSETLNKLAAVMEEKEYWDCSLEERVFLLKFLS 365
              V     THVI QR+ K  QG+ T  + E+L  LAA MEEKEYW+ S+++R FL KFL 
Sbjct: 1270 SMVDVSEHTHVIAQRQGKNCQGDFTHAYLESLAHLAAAMEEKEYWELSVDQRTFLFKFLC 1329

Query: 366  DEVLNSSIVREHLDQCAEMSADVQQKLHSFSVELRNLKYKVEVLT----KESRGMLNGVG 533
            DE+LN++++R+HL+QCAE SA++QQKL S SVE +NLK K E L     K   GM+   G
Sbjct: 1330 DELLNTALIRQHLEQCAESSAELQQKLRSISVEWKNLKLKEENLAARAPKVDSGMIYVAG 1389

Query: 534  ETGKE-AVASMLLNLSRGFGQHQTLN 608
            E G E  ++S L N  +   +  TL+
Sbjct: 1390 EVGTEGGLSSALTNNGKCIAKPHTLS 1415


>emb|CBI32139.3| unnamed protein product [Vitis vinifera]
          Length = 1789

 Score =  220 bits (561), Expect = 2e-55
 Identities = 105/180 (58%), Positives = 132/180 (73%), Gaps = 2/180 (1%)
 Frame = +3

Query: 9    EIPKAPWDDGVCRLCGIDKSDETVLLCDHCDSEYHTYCLIPPLLKIPIGNWYCPTCIESG 188
            EIPKAPWD+G+C++CG+DK D+ VLLCD CDSEYHTYCL PPL +IP GNWYCP+C+ + 
Sbjct: 929  EIPKAPWDEGLCKVCGVDKDDDNVLLCDACDSEYHTYCLNPPLARIPEGNWYCPSCVAAQ 988

Query: 189  EVK--APPDTHVIHQRRRKRYQGEGTRIFSETLNKLAAVMEEKEYWDCSLEERVFLLKFL 362
             +         V  + RRKRYQGE TR + ETL  LA +ME KEY + S+EERVFLLKF 
Sbjct: 989  RLSQGTSRSAEVFSRCRRKRYQGEFTRTYLETLTHLATIMEIKEYCELSIEERVFLLKFF 1048

Query: 363  SDEVLNSSIVREHLDQCAEMSADVQQKLHSFSVELRNLKYKVEVLTKESRGMLNGVGETG 542
             +EVLNS+I+REHL+QCA +SAD+QQKL + S+E RNLK + E+L  +     N VG  G
Sbjct: 1049 CEEVLNSAIIREHLEQCASLSADLQQKLRTLSLERRNLKLREEILAVKVE-KANSVGLDG 1107


Top