BLASTX nr result

ID: Papaver23_contig00021992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00021992
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    66   3e-09
ref|XP_003613719.1| F-box/LRR-repeat protein [Medicago truncatul...    61   1e-07
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...    57   2e-06
gb|AAF82256.1|AC008051_7 Contains a F-box PF|00646 domain [Arabi...    55   5e-06
ref|NP_176127.1| F-box protein [Arabidopsis thaliana] gi|3740953...    55   5e-06

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
 Frame = -2

Query: 507 RNFDIQINAPSLQSFKYSEILAKDFVLQNFLTLLDAEVVLSCAADRGEREEL---GCLA- 340
           +++ + ++AP+L+    ++ L+KD+ +++  +L+ A   +    D  E EE    G ++ 
Sbjct: 235 QDYKVVVDAPNLEYLSITDYLSKDYFVKDLPSLVKA--FIDVEQDSEEFEESPHNGGISY 292

Query: 339 ----AKLFASLSNVKRLKISEYTLKLLSYQDDFQMKLPLYHNLNHLEVSRASFHFRRDWY 172
                +L   +SNVK L ++  TL  LS       KLP +HN+  LE     F    +W 
Sbjct: 293 HGPIYELLGRISNVKCLSLTGVTLDSLSGTIG-DYKLPTFHNMTRLEF---LFIGGFNWD 348

Query: 171 FEDNVQCWIVKVLFDFLQVSPNLESLIFDEGFSNCKSNNYDGWLMDL-IPQCLLLHLK 1
           F  N           FL  SPNLE+L+ + G++N      +GWLM L +P CL+LHLK
Sbjct: 349 FLPN-----------FLHSSPNLEALVIETGYTN--ELIPEGWLMPLQVPACLVLHLK 393


>ref|XP_003613719.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355515054|gb|AES96677.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 472

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 6/147 (4%)
 Frame = -2

Query: 516 LLYRNFD------IQINAPSLQSFKYSEILAKDFVLQNFLTLLDAEVVLSCAADRGEREE 355
           +LY  +D      ++I+AP++ S   S      FVL N ++++DA + L     + E+  
Sbjct: 193 ILYNYYDHYDCHTVKIDAPNISSLSCSSTPTLKFVLVNLISIVDANIGLEFDYPQSEQYA 252

Query: 354 LGCLAAKLFASLSNVKRLKISEYTLKLLSYQDDFQMKLPLYHNLNHLEVSRASFHFRRDW 175
             C+  +L ++L  VK L ++  T + L +  D    LPL+H+L HL ++ +       W
Sbjct: 253 AQCVF-ELLSALKGVKSLTMTSDTFQSLYFSADTLHLLPLFHSLTHLYITHS-------W 304

Query: 174 YFEDNVQCWIVKVLFDFLQVSPNLESL 94
             +     + ++VLFD L  +P LE L
Sbjct: 305 IMD-----FTLEVLFDILHKTPKLEVL 326


>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 467

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 9/173 (5%)
 Frame = -2

Query: 492 QINAPSLQSFKYSEILAKDFVLQNFLTLLDAEVVLSCAADRGEREELGCLAAKLFASLSN 313
           +I+A +L S  Y      +  L N  +++DA + L     +     +   A +LF+ L +
Sbjct: 241 KIDAVNLLSLSYKSNPTINCFLVNSTSIVDANIDLGFFCVQNNELHVAVFAIELFSRLGS 300

Query: 312 VKRLKISEYTLKLLSYQDDFQMKLPLYHNLNHLEVSRASFHFRRDWYFEDNVQCWIVKVL 133
           V+ L++S+ T++ L+Y       LP + NL  LEV     HF       D+  C   +VL
Sbjct: 301 VESLRLSDQTIQCLNYAKSALHLLPSFKNLTRLEV-----HF-------DDPSC---EVL 345

Query: 132 FDFLQVSPNLESL-IFDEGFSNC---KSNNY-----DGWLMDLIPQCLLLHLK 1
            D L+ SP LE L I+     +C    S +Y     + W  D +P C    LK
Sbjct: 346 ADILRKSPKLEFLHIYGVHLVSCSRFSSGSYLSLDSEDWTSDSLPCCFKSSLK 398


>gb|AAF82256.1|AC008051_7 Contains a F-box PF|00646 domain [Arabidopsis thaliana]
          Length = 482

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 11/147 (7%)
 Frame = -2

Query: 495 IQINAPSLQSFKYSEILAKDFVLQNFLTLLDAEVVLSCAADRGEREEL--------GCLA 340
           +  N P+L    +++ +A ++   NF +L++A + L  + D+ E+           GC+ 
Sbjct: 224 VSFNTPNLVYLMFTDAIADEYSTVNFDSLVEAHINLQMSEDQVEQTRFSDSEGNMEGCMV 283

Query: 339 A---KLFASLSNVKRLKISEYTLKLLSYQDDFQMKLPLYHNLNHLEVSRASFHFRRDWYF 169
           A   +L   + NVK L +S YTL++L+Y  +    +PL++NL HL +   S      W  
Sbjct: 284 ANATELIMGICNVKILYLSVYTLEVLTYCCE---AIPLFNNLTHLTIESNS---EVGW-- 335

Query: 168 EDNVQCWIVKVLFDFLQVSPNLESLIF 88
                    + +   L+ SPNLE+L+F
Sbjct: 336 ---------ESVSGLLKNSPNLETLVF 353


>ref|NP_176127.1| F-box protein [Arabidopsis thaliana]
           gi|374095392|sp|Q9LQC1.2|FB65_ARATH RecName:
           Full=Putative F-box protein At1g58310
           gi|332195413|gb|AEE33534.1| F-box protein [Arabidopsis
           thaliana]
          Length = 505

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 11/147 (7%)
 Frame = -2

Query: 495 IQINAPSLQSFKYSEILAKDFVLQNFLTLLDAEVVLSCAADRGEREEL--------GCLA 340
           +  N P+L    +++ +A ++   NF +L++A + L  + D+ E+           GC+ 
Sbjct: 247 VSFNTPNLVYLMFTDAIADEYSTVNFDSLVEAHINLQMSEDQVEQTRFSDSEGNMEGCMV 306

Query: 339 A---KLFASLSNVKRLKISEYTLKLLSYQDDFQMKLPLYHNLNHLEVSRASFHFRRDWYF 169
           A   +L   + NVK L +S YTL++L+Y  +    +PL++NL HL +   S      W  
Sbjct: 307 ANATELIMGICNVKILYLSVYTLEVLTYCCE---AIPLFNNLTHLTIESNS---EVGW-- 358

Query: 168 EDNVQCWIVKVLFDFLQVSPNLESLIF 88
                    + +   L+ SPNLE+L+F
Sbjct: 359 ---------ESVSGLLKNSPNLETLVF 376


Top