BLASTX nr result

ID: Papaver23_contig00021863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00021863
         (1516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-...   449   e-124
ref|XP_002512344.1| excision repair cross-complementing 1 ercc1,...   437   e-120
ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|2...   426   e-117
ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-...   420   e-115
ref|XP_003591075.1| DNA excision repair protein ERCC-1 [Medicago...   412   e-112

>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
            gi|296088298|emb|CBI36743.3| unnamed protein product
            [Vitis vinifera]
          Length = 398

 Score =  449 bits (1155), Expect = e-124
 Identities = 239/364 (65%), Positives = 271/364 (74%), Gaps = 5/364 (1%)
 Frame = -2

Query: 1512 IPSYEVIFDNSQQNPKPNQSLFNPSPSFSQAFSFIKNTEFYXXXXXXXXXXXXXXXXXXX 1333
            IPSY+ + ++SQ   K   SLF PSPSFSQAFSF+K+++ Y                   
Sbjct: 26   IPSYQEVLESSQS--KTTSSLFTPSPSFSQAFSFVKSSQSYTPPPPATPPPPPPPSSRQV 83

Query: 1332 XXXXXXXSRTIGXXXXXXXXXXXXXXXQNRNAILVSHRQKGNPLLKYIRNVRWVFADVVC 1153
                      +                Q+RNAILVSHRQKGNPLLK+IRNVRW FAD+VC
Sbjct: 84   --------EQLEAPSSSSSSPSLSRSAQSRNAILVSHRQKGNPLLKHIRNVRWDFADIVC 135

Query: 1152 DYLLGPNSCALYLSVRYHLLHPDYLYFRIRELQKNFKLRVILCHVDVEDVVKPLQEVTRT 973
            DYLLG NSCALYLS+RYHLLHPDYLY+RIRELQKNFKLRV+LCHVDVEDV+KPL EVTRT
Sbjct: 136  DYLLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVIKPLLEVTRT 195

Query: 972  AMLHDCTLLCAWSLEECGRYLETIKVYENKPADILQGQTDTDYLSRLSHALTTVRHVNKT 793
            A+LHDCTLLCAWSLEECGRYLETIKVYENK ADI+QGQTDTDYLSRL+HALTTVRHVNKT
Sbjct: 196  ALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQTDTDYLSRLTHALTTVRHVNKT 255

Query: 792  DVVTLGSTFGSLSNIMDASMEDLAHCPGIGERKVKRLYDTFHEPSRHDVSTTGL--EAPS 619
            DVVTLGSTFGSLS+IMDASMEDLA CPGIGERKVKRLYDTFHEP +  V +     E P 
Sbjct: 256  DVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVVPSCPAVPENPV 315

Query: 618  DSNAGSSPSDFVMEPENGGGVATKLMKKEPNLTVKSALKAAFAKYANKV---HAKPPGEK 448
             +NA  S  + V+E EN    A+K  KKEP LTVKSAL AAFA+Y+ K+   + +P G+K
Sbjct: 316  HNNAEPSSVNEVVEVENDVEDASKRRKKEPELTVKSALSAAFAQYSEKIGKRNNRPQGKK 375

Query: 447  AEEK 436
             EEK
Sbjct: 376  HEEK 379


>ref|XP_002512344.1| excision repair cross-complementing 1 ercc1, putative [Ricinus
            communis] gi|223548305|gb|EEF49796.1| excision repair
            cross-complementing 1 ercc1, putative [Ricinus communis]
          Length = 392

 Score =  437 bits (1125), Expect = e-120
 Identities = 241/370 (65%), Positives = 269/370 (72%), Gaps = 7/370 (1%)
 Frame = -2

Query: 1512 IPSYEVIFDNSQQNPKPNQSLFNPSPSFSQAFSFIKNTEFYXXXXXXXXXXXXXXXXXXX 1333
            IPSY+ + ++SQ NPK  +SLF PS +FSQAFSFIK++EFY                   
Sbjct: 26   IPSYQEVIESSQ-NPK-TESLFKPSQTFSQAFSFIKDSEFYTPPPQSSAVSNNA------ 77

Query: 1332 XXXXXXXSRTIGXXXXXXXXXXXXXXXQN-RNAILVSHRQKGNPLLKYIRNVRWVFADVV 1156
                     +I                 N RN+ILVSHRQKGNPLLK+IRNVRW FADVV
Sbjct: 78   --------NSIQTTQSVPSPSQSVALTGNYRNSILVSHRQKGNPLLKHIRNVRWAFADVV 129

Query: 1155 CDYLLGPNSCALYLSVRYHLLHPDYLYFRIRELQKNFKLRVILCHVDVEDVVKPLQEVTR 976
            CDYLLG N C+LYLS+RYHLLHPDYLY+RIRELQKN+KLRV+LCHVDVEDVVKPL EVT+
Sbjct: 130  CDYLLGQNCCSLYLSLRYHLLHPDYLYYRIRELQKNYKLRVVLCHVDVEDVVKPLLEVTK 189

Query: 975  TAMLHDCTLLCAWSLEECGRYLETIKVYENKPADILQGQTDTDYLSRLSHALTTVRHVNK 796
            TA+LHDCTLLCAWSLEECGRYLETIK+YENKPAD++QGQ DTDYLSRL+HALTT+RHVNK
Sbjct: 190  TALLHDCTLLCAWSLEECGRYLETIKMYENKPADLIQGQMDTDYLSRLTHALTTIRHVNK 249

Query: 795  TDVVTLGSTFGSLSNIMDASMEDLAHCPGIGERKVKRLYDTFHEPSRHDVSTTGLEAPSD 616
            TDVVTLGSTFGSLSNIMDASMEDLA CPGIGERKVKRLYDTFHEP +  VS+     P  
Sbjct: 250  TDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVVSSHP-AVPET 308

Query: 615  SNAGSSPS--DFVMEPENGGGVATKLMKKEPNLTVKSALKAAFAKYAN---KVHAKPPGE 451
            S   S P+  D V E   G    +K  KKEP LTVKSAL AAF+KYAN   K   K  GE
Sbjct: 309  SQKDSEPALVDEVTEVGKGEYDESKWRKKEPELTVKSALSAAFSKYANTFVKRTDKSEGE 368

Query: 450  KA-EEKISVE 424
             A E   SVE
Sbjct: 369  NAGETSCSVE 378


>ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|222838142|gb|EEE76507.1|
            predicted protein [Populus trichocarpa]
          Length = 382

 Score =  426 bits (1095), Expect = e-117
 Identities = 230/355 (64%), Positives = 255/355 (71%), Gaps = 5/355 (1%)
 Frame = -2

Query: 1512 IPSYEVIFDNSQQNPKPNQ--SLFNPSPSFSQAFSFIKNTEFYXXXXXXXXXXXXXXXXX 1339
            IPSY+ + ++SQ  P   Q  SLF PS +FSQAFSFIKN+EFY                 
Sbjct: 25   IPSYQEVIESSQVKPTQTQESSLFKPSQTFSQAFSFIKNSEFYSPPPPPPSKSEHGPSMA 84

Query: 1338 XXXXXXXXXSRTIGXXXXXXXXXXXXXXXQNRNAILVSHRQKGNPLLKYIRNVRWVFADV 1159
                                          +RNAILVSHRQKGNPLLK+IRNV+W FADV
Sbjct: 85   SSSVQNNQ----------------------SRNAILVSHRQKGNPLLKHIRNVKWAFADV 122

Query: 1158 VCDYLLGPNSCALYLSVRYHLLHPDYLYFRIRELQKNFKLRVILCHVDVEDVVKPLQEVT 979
            VCDYLLG +SCALYLS+RYHLLHPDYLY+RIRELQKN KLRV+LCHVDVEDVVKPL EVT
Sbjct: 123  VCDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNCKLRVVLCHVDVEDVVKPLLEVT 182

Query: 978  RTAMLHDCTLLCAWSLEECGRYLETIKVYENKPADILQGQTDTDYLSRLSHALTTVRHVN 799
            +TA+LHDCTLLCAWSLEECGRYLETIK+YENKPAD++QGQ DTDY SRL HALTTVR VN
Sbjct: 183  KTALLHDCTLLCAWSLEECGRYLETIKMYENKPADLIQGQMDTDYSSRLHHALTTVRRVN 242

Query: 798  KTDVVTLGSTFGSLSNIMDASMEDLAHCPGIGERKVKRLYDTFHEPSRHDVSTTGL--EA 625
            KTDVVTLGSTFGSLSNIMDASMEDLA CPGIGERKVKRLYDTFHEP +  VS+  +  + 
Sbjct: 243  KTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVVSSHPVVPQT 302

Query: 624  PSDSNAGSSPSDFVMEPENGGGVATKLMKKEPNLTVKSALKAAFAKYA-NKVHAK 463
            P   +   S  D V E E     A K  KKEP LTVKSAL +AFAK A NK+  K
Sbjct: 303  PVQKDTEPSSVDEVAEMEMEEANANKHRKKEPELTVKSALSSAFAKCATNKLGNK 357


>ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-1-like [Glycine max]
          Length = 398

 Score =  420 bits (1080), Expect = e-115
 Identities = 225/375 (60%), Positives = 263/375 (70%), Gaps = 16/375 (4%)
 Frame = -2

Query: 1512 IPSYEVIFDNSQQNPKPNQSLFNPSPSFSQAFSFIKNTEFYXXXXXXXXXXXXXXXXXXX 1333
            IPSY+ + ++SQ    P+ SLF PS +FS+AF+F+K+++FY                   
Sbjct: 23   IPSYQEVVESSQAKSTPS-SLFVPSQTFSEAFAFVKSSDFYSPPPKSRETGQSDAPSS-- 79

Query: 1332 XXXXXXXSRTIGXXXXXXXXXXXXXXXQNRNAILVSHRQ-----KGNPLLKYIRNVRWVF 1168
                     T                 QNRN+ILVSHRQ     KGNPLLK+IRNVRW F
Sbjct: 80   ---------TSTPSPATAAASSTIPSSQNRNSILVSHRQCIILQKGNPLLKHIRNVRWAF 130

Query: 1167 ADVVCDYLLGPNSCALYLSVRYHLLHPDYLYFRIRELQKNFKLRVILCHVDVEDVVKPLQ 988
            ADVVCDY+LG +SCALYLS+RYHLLHPDYLY+RIRELQKNFKLRV+LCHVDVEDV+KPL 
Sbjct: 131  ADVVCDYMLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVIKPLL 190

Query: 987  EVTRTAMLHDCTLLCAWSLEECGRYLETIKVYENKPADILQGQTDTDYLSRLSHALTTVR 808
            EVT+TAMLHDCTLLC WSLEECGRYLETIKVYENKPADI+QGQ DTDYLSRL+H+LTTVR
Sbjct: 191  EVTKTAMLHDCTLLCGWSLEECGRYLETIKVYENKPADIIQGQMDTDYLSRLTHSLTTVR 250

Query: 807  HVNKTDVVTLGSTFGSLSNIMDASMEDLAHCPGIGERKVKRLYDTFHEP-SRHDVSTTGL 631
            HVNKTDVVTLG+TFGSLSNIM ASMEDLA CPGIGERKVKRL+DTFHEP  R + S   +
Sbjct: 251  HVNKTDVVTLGTTFGSLSNIMGASMEDLARCPGIGERKVKRLFDTFHEPFKRVESSRQAI 310

Query: 630  EAPSDSNAGSSP----------SDFVMEPENGGGVATKLMKKEPNLTVKSALKAAFAKYA 481
               S  N  +SP          S  + + +      +K  KKEP +TVKSAL AAFAKY+
Sbjct: 311  PETSVQNKPASPESSIRNKAESSSLIEDKQEDTEDVSKRRKKEPEVTVKSALSAAFAKYS 370

Query: 480  NKVHAKPPGEKAEEK 436
             +V  +    + EEK
Sbjct: 371  GRVGKRKSTSQVEEK 385


>ref|XP_003591075.1| DNA excision repair protein ERCC-1 [Medicago truncatula]
            gi|355480123|gb|AES61326.1| DNA excision repair protein
            ERCC-1 [Medicago truncatula]
          Length = 401

 Score =  412 bits (1058), Expect = e-112
 Identities = 222/370 (60%), Positives = 255/370 (68%), Gaps = 11/370 (2%)
 Frame = -2

Query: 1512 IPSYEVIFDNSQQNPKPNQSLFNPSPSFSQAFSFIKNTEFYXXXXXXXXXXXXXXXXXXX 1333
            IPSY+ + ++SQ    P  SLF PS +FSQAF+F+K++EFY                   
Sbjct: 22   IPSYQEVIESSQTKSTP-PSLFVPSQTFSQAFAFVKSSEFYSPPPSLPKENAPSNASSST 80

Query: 1332 XXXXXXXSRTIGXXXXXXXXXXXXXXXQNRNAILVSHRQKGNPLLKYIRNVRWVFADVVC 1153
                   +                   QNRNAILVS+RQKGNPLLK+IRNVRW FADVVC
Sbjct: 81   PSTSSATNNA--PAASPNLPNSNSQPTQNRNAILVSNRQKGNPLLKHIRNVRWTFADVVC 138

Query: 1152 DYLLGPNSCALYLSVRYHLLHPDYLYFRIRELQKNFKLRVILCHVDVEDVVKPLQEVTRT 973
            D+LLG +SCALYLS+RYHLLHPDYLY RIRELQKNFKLRV+LCHVDVEDVVKPL EVT+T
Sbjct: 139  DFLLGQSSCALYLSLRYHLLHPDYLYHRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTKT 198

Query: 972  AMLHDCTLLCAWSLEECGRYLETIKVYENKPADILQGQTDTDYLSRLSHALTTVRHVNKT 793
            A+LHDCTLLC WSLEECGRYLETIKVYENKPADI+QGQ DTDYLSRL+HALTTVRHVNKT
Sbjct: 199  ALLHDCTLLCGWSLEECGRYLETIKVYENKPADIIQGQMDTDYLSRLTHALTTVRHVNKT 258

Query: 792  DVVTLGSTFGSLSNIMDASMEDLAHCPGIGERKVKRLYDTFHEP------SRHDVSTTGL 631
            DVVTLG+ FGSLSNIM ASMEDLA CPGIGERKVKRL+DTFHEP      SR  +  T +
Sbjct: 259  DVVTLGTNFGSLSNIMGASMEDLARCPGIGERKVKRLFDTFHEPFKRVESSRQAIPETSV 318

Query: 630  EAPSDSNAGS-----SPSDFVMEPENGGGVATKLMKKEPNLTVKSALKAAFAKYANKVHA 466
            +    S   S       S  + +       A+K  KKEP  TV+SAL  AFAK + +   
Sbjct: 319  QNQPTSQDTSVINNTESSSSLEDIHKDADSASKRKKKEPEFTVRSALSVAFAKLSERAGK 378

Query: 465  KPPGEKAEEK 436
            +    K +EK
Sbjct: 379  RNISSKLKEK 388


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