BLASTX nr result

ID: Papaver23_contig00021858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00021858
         (1083 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medi...    92   2e-16
ref|XP_003626682.1| CCR4-NOT transcription complex subunit [Medi...    92   2e-16
ref|XP_004173697.1| PREDICTED: CCR4-NOT transcription complex su...    89   2e-15
ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra...    89   2e-15
tpg|DAA54293.1| TPA: hypothetical protein ZEAMMB73_924668 [Zea m...    88   3e-15

>ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355520705|gb|AET01159.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 2410

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 42/51 (82%), Positives = 45/51 (88%)
 Frame = -1

Query: 333  VPFTSKIREPCQSSLAYQTPNPWTMGILVLLAEICKLPNLKMNLKFDIRGL 181
            +PFTSK+ EPCQSSLAYQ PNPWTMGIL LLAEIC +PNLKMNLKFDI  L
Sbjct: 1122 IPFTSKVLEPCQSSLAYQPPNPWTMGILGLLAEICSMPNLKMNLKFDIEVL 1172



 Score = 70.5 bits (171), Expect = 7e-10
 Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
 Frame = -2

Query: 275  QIPGPWEY--LFYLLRFANYQI*R*TSSLTFEVLLKNLGVDMKDVKPTSLLKD--RELEG 108
            Q P PW    L  L    +    +       EVL KNLGVDMKDV PTSLLKD  RE+EG
Sbjct: 1139 QPPNPWTMGILGLLAEICSMPNLKMNLKFDIEVLYKNLGVDMKDVTPTSLLKDRKREIEG 1198

Query: 107  NPDFSIKDVTATKLQIVPEVHP 42
            NPDFS KDV A++ Q++ ++ P
Sbjct: 1199 NPDFSNKDVGASQSQMISDIKP 1220


>ref|XP_003626682.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355520704|gb|AET01158.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 2418

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 42/51 (82%), Positives = 45/51 (88%)
 Frame = -1

Query: 333  VPFTSKIREPCQSSLAYQTPNPWTMGILVLLAEICKLPNLKMNLKFDIRGL 181
            +PFTSK+ EPCQSSLAYQ PNPWTMGIL LLAEIC +PNLKMNLKFDI  L
Sbjct: 1122 IPFTSKVLEPCQSSLAYQPPNPWTMGILGLLAEICSMPNLKMNLKFDIEVL 1172



 Score = 70.5 bits (171), Expect = 7e-10
 Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
 Frame = -2

Query: 275  QIPGPWEY--LFYLLRFANYQI*R*TSSLTFEVLLKNLGVDMKDVKPTSLLKD--RELEG 108
            Q P PW    L  L    +    +       EVL KNLGVDMKDV PTSLLKD  RE+EG
Sbjct: 1139 QPPNPWTMGILGLLAEICSMPNLKMNLKFDIEVLYKNLGVDMKDVTPTSLLKDRKREIEG 1198

Query: 107  NPDFSIKDVTATKLQIVPEVHP 42
            NPDFS KDV A++ Q++ ++ P
Sbjct: 1199 NPDFSNKDVGASQSQMISDIKP 1220


>ref|XP_004173697.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like, partial
           [Cucumis sativus]
          Length = 273

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 42/53 (79%), Positives = 45/53 (84%)
 Frame = -1

Query: 333 VPFTSKIREPCQSSLAYQTPNPWTMGILVLLAEICKLPNLKMNLKFDIRGLIE 175
           +PFTSKI EPCQSSLAYQ PNPWTMGIL LLAEI  +PNLKMNLKFDI  L +
Sbjct: 145 IPFTSKILEPCQSSLAYQPPNPWTMGILGLLAEIYSMPNLKMNLKFDIEVLFK 197



 Score = 67.4 bits (163), Expect = 6e-09
 Identities = 41/80 (51%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
 Frame = -2

Query: 275 QIPGPWEYLFYLLRFANYQI*R*TSSLTF--EVLLKNLGVDMKDVKPTSLLKD--RELEG 108
           Q P PW      L    Y +     +L F  EVL KNL VDMK++ PTSLLKD  RE++G
Sbjct: 162 QPPNPWTMGILGLLAEIYSMPNLKMNLKFDIEVLFKNLSVDMKEITPTSLLKDRKREIDG 221

Query: 107 NPDFSIKDVTATKLQIVPEV 48
           NPDFS KDV A++ Q+V EV
Sbjct: 222 NPDFSNKDVGASQTQMVAEV 241


>ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
            subunit 1-like [Cucumis sativus]
          Length = 2427

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 42/53 (79%), Positives = 45/53 (84%)
 Frame = -1

Query: 333  VPFTSKIREPCQSSLAYQTPNPWTMGILVLLAEICKLPNLKMNLKFDIRGLIE 175
            +PFTSKI EPCQSSLAYQ PNPWTMGIL LLAEI  +PNLKMNLKFDI  L +
Sbjct: 1127 IPFTSKILEPCQSSLAYQPPNPWTMGILGLLAEIYSMPNLKMNLKFDIEVLFK 1179



 Score = 67.4 bits (163), Expect = 6e-09
 Identities = 41/80 (51%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
 Frame = -2

Query: 275  QIPGPWEYLFYLLRFANYQI*R*TSSLTF--EVLLKNLGVDMKDVKPTSLLKD--RELEG 108
            Q P PW      L    Y +     +L F  EVL KNL VDMK++ PTSLLKD  RE++G
Sbjct: 1144 QPPNPWTMGILGLLAEIYSMPNLKMNLKFDIEVLFKNLSVDMKEITPTSLLKDRKREIDG 1203

Query: 107  NPDFSIKDVTATKLQIVPEV 48
            NPDFS KDV A++ Q+V EV
Sbjct: 1204 NPDFSNKDVGASQTQMVAEV 1223


>tpg|DAA54293.1| TPA: hypothetical protein ZEAMMB73_924668 [Zea mays]
          Length = 325

 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 42/55 (76%), Positives = 46/55 (83%)
 Frame = -1

Query: 345 MPISVPFTSKIREPCQSSLAYQTPNPWTMGILVLLAEICKLPNLKMNLKFDIRGL 181
           M + +PFTSKI EPCQSS+AY+ PNPWTMGIL LLAEI  LPNLKMNLKFDI  L
Sbjct: 94  MIVVIPFTSKILEPCQSSIAYRPPNPWTMGILSLLAEIYNLPNLKMNLKFDIEVL 148


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