BLASTX nr result

ID: Papaver23_contig00021762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00021762
         (1421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303505.1| chromatin remodeling complex subunit [Populu...   127   9e-27
ref|XP_002329920.1| chromatin remodeling complex subunit [Populu...   125   2e-26
ref|XP_002523656.1| chromodomain helicase DNA binding protein, p...   124   6e-26
ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...   120   9e-25
ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793...   119   3e-24

>ref|XP_002303505.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222840937|gb|EEE78484.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2327

 Score =  127 bits (318), Expect = 9e-27
 Identities = 64/106 (60%), Positives = 73/106 (68%), Gaps = 3/106 (2%)
 Frame = -3

Query: 1398 SDNISPLSLRKRKGDDGYYYECVICDVGGNLLCCDSCPRTYHLECLTPPLKRAPPGKWQC 1219
            S+  S LS  K+KG+DGYYYECVICD+GGNLLCCDSCPR YHL+CL PPLKR P GKWQC
Sbjct: 54   SELSSDLSTSKKKGNDGYYYECVICDLGGNLLCCDSCPRVYHLQCLDPPLKRIPMGKWQC 113

Query: 1218 PNCVDAHGSQKSTRCPES-SRRVRRKLEI--SGFGVKSSESDKLGA 1090
            P C       KS     S S+R R K+    S  GVKSS +DK+ A
Sbjct: 114  PKCSKKSDPLKSINPLGSISKRARTKVVTTNSRTGVKSSVADKVSA 159


>ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222871157|gb|EEF08288.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2332

 Score =  125 bits (315), Expect = 2e-26
 Identities = 62/106 (58%), Positives = 72/106 (67%), Gaps = 3/106 (2%)
 Frame = -3

Query: 1398 SDNISPLSLRKRKGDDGYYYECVICDVGGNLLCCDSCPRTYHLECLTPPLKRAPPGKWQC 1219
            S+  S LS  K+KG+DGYYYECVICD+GGNLLCCDSCPR YHL+CL PPLKR P GKWQC
Sbjct: 44   SEQSSDLSSSKKKGNDGYYYECVICDLGGNLLCCDSCPRVYHLQCLDPPLKRIPMGKWQC 103

Query: 1218 PNCVDAHGSQKS-TRCPESSRRVRRKL--EISGFGVKSSESDKLGA 1090
            P C       KS +     S+R R K+    S  G KSS +DK+ A
Sbjct: 104  PKCSQKSDPLKSISPLGSISKRARTKIITTNSRTGFKSSGTDKVSA 149


>ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis] gi|223537108|gb|EEF38742.1| chromodomain
            helicase DNA binding protein, putative [Ricinus communis]
          Length = 2257

 Score =  124 bits (311), Expect = 6e-26
 Identities = 58/100 (58%), Positives = 71/100 (71%), Gaps = 3/100 (3%)
 Frame = -3

Query: 1386 SPLSLRKRKGDDGYYYECVICDVGGNLLCCDSCPRTYHLECLTPPLKRAPPGKWQCPNCV 1207
            S LS  K+KG+DGYYYECVICD+GGNLLCCDSCPR YHL+CL PPLKR P GKWQCP C 
Sbjct: 61   SDLSSSKKKGNDGYYYECVICDLGGNLLCCDSCPRVYHLQCLDPPLKRIPMGKWQCPKCY 120

Query: 1206 DAHGSQKS-TRCPESSRRVRRKLEISG--FGVKSSESDKL 1096
                  KS T+    S+R R K+  +    GV+S +++K+
Sbjct: 121  QKSDPLKSITQLDSISKRARTKIISTNPKTGVRSCDTEKV 160


>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score =  120 bits (301), Expect = 9e-25
 Identities = 58/110 (52%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
 Frame = -3

Query: 1416 ADDKLTSDNISPLSLRKRKGDDGYYYECVICDVGGNLLCCDSCPRTYHLECLTPPLKRAP 1237
            A  +L  +  S  S  K+KG+DGYY+ECVICD+GGNLLCCDSCPRTYHL+CL PPLKR P
Sbjct: 51   AKRRLKGEASSDRSALKKKGNDGYYFECVICDLGGNLLCCDSCPRTYHLQCLNPPLKRIP 110

Query: 1236 PGKWQCPNCVDAHGS-QKSTRCPESSRRVRRKL--EISGFGVKSSESDKL 1096
             GKWQCP C     S +  +     S+R R K+    S   +KSS ++K+
Sbjct: 111  NGKWQCPKCCQKSDSLEPMSHLDSISKRARTKIVSAKSKSEIKSSGTEKV 160



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 39/99 (39%), Positives = 52/99 (52%)
 Frame = -3

Query: 297 EPKDESSERKSQLPYSTESPKDTPNSSVASATQKDMKKNQKVILVDDQKKSGAKKGNCVI 118
           EP DE+S RK  L     +  +    ++ +AT+K  K+  KV   D QKKS   KG    
Sbjct: 260 EPNDEASGRKPDLSCDNGTSGNKLIHAMDAATRKARKRKHKVNSDDSQKKSRTDKGKHAA 319

Query: 117 KTSRDRGPKLISVSLETSKRSRKRSPVDNQISTVLSKEE 1
            TS+  G K  S+S ETS+  RKR   D  +S  LSKE+
Sbjct: 320 NTSKKSGSKANSMSPETSRSHRKRRTADKGVSAGLSKED 358


>ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793933 [Glycine max]
          Length = 2325

 Score =  119 bits (297), Expect = 3e-24
 Identities = 56/94 (59%), Positives = 67/94 (71%), Gaps = 5/94 (5%)
 Frame = -3

Query: 1407 KLTSDNISPLSLRKRKGDDGYYYECVICDVGGNLLCCDSCPRTYHLECLTPPLKRAPPGK 1228
            ++ +D IS     K+KG+DGYYYECVICDVGGNLLCCDSCPRTYHL+CL PPLKR P GK
Sbjct: 53   EVATDQISS----KKKGNDGYYYECVICDVGGNLLCCDSCPRTYHLQCLDPPLKRIPNGK 108

Query: 1227 WQCPNCVDAHGSQKSTRCPES-----SRRVRRKL 1141
            WQCP+C +     K  R P +     S+R R K+
Sbjct: 109  WQCPSCFEG----KDQRMPINHLDPISKRARTKI 138


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