BLASTX nr result

ID: Papaver23_contig00021724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00021724
         (891 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_191476.1| putative F-box/LRR-repeat protein [Arabidopsis ...    57   4e-06
ref|NP_191484.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    57   4e-06
ref|NP_190484.3| FBD and preprotein translocase YidC domain-cont...    57   8e-06

>ref|NP_191476.1| putative F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75264310|sp|Q9LX54.1|FBL62_ARATH RecName:
           Full=Putative F-box/LRR-repeat protein At3g59170
           gi|7801667|emb|CAB91587.1| putative protein [Arabidopsis
           thaliana] gi|332646364|gb|AEE79885.1| putative
           F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 473

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
 Frame = +1

Query: 10  ELFSNSTALEELILD---SCIYSMRSFCISIPTLKCLTIDCLNEEVNGL-----RDCVFK 165
           +L S    LEEL+LD   SC+++  SF +S+ TLK LT  C      G            
Sbjct: 206 KLLSGCPVLEELVLDGMGSCVWT--SFTVSVATLKRLTFCCQKMSSFGYMHDDENPNNVS 263

Query: 166 IDAPRLVTFVYWGYGAKEFVLSSFEALVEATV-YFNCQNNVGAVRI------------SQ 306
            D P LV   Y    A  +   +F+ LVEA +  +   + +  VR+            + 
Sbjct: 264 FDTPNLVYLEYAQVIANNYPKVNFDLLVEAKIDIWMTVDQIREVRLRKNEVNCMVGNATD 323

Query: 307 FLRALAHVKCLTVYNPTLKAICSAYLSNNLLTFQHVKMLKISADITSDDQGLIAFLKAVP 486
           F+  L +V+ L +   TL+ +   Y    +  F+++  L I +D     + L   LK  P
Sbjct: 324 FIVGLRNVRVLYLSPETLEVL--TYCCKQIPIFENLSHLTIKSDPNVGWKPLTKLLKNSP 381

Query: 487 KLESLVFDGYIN 522
           KLE+LVF G ++
Sbjct: 382 KLETLVFQGLLH 393


>ref|NP_191484.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75264304|sp|Q9LX46.1|FBL68_ARATH RecName:
           Full=F-box/LRR-repeat protein At3g59250
           gi|7801675|emb|CAB91595.1| putative protein [Arabidopsis
           thaliana] gi|332646375|gb|AEE79896.1| F-box/LRR-repeat
           protein [Arabidopsis thaliana]
          Length = 425

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 8/180 (4%)
 Frame = +1

Query: 7   EELFSNSTALEELILDSCIYSMRSFCISIPTLKCLTIDCLNEEVNGLRDCVFKIDAPRLV 186
           E+L S    LEEL+L++   ++ +  +S  TLK LT+ C           +F  D P LV
Sbjct: 147 EKLTSGCHVLEELVLNNVYSNVWNRSVSSKTLKRLTLWCTESYDKNPHSVLF--DTPNLV 204

Query: 187 TFVYWGYGAKEFVLSSFEALVEATVYF--------NCQNNVGAVRISQFLRALAHVKCLT 342
              Y  Y A ++   +F +LV+AT+          N   +      + FL  + +V+ L 
Sbjct: 205 YLKYSDYVAAKYPKVNFSSLVDATIGLAMTSDQDANASYDALVGNATDFLMGICNVQILC 264

Query: 343 VYNPTLKAICSAYLSNNLLTFQHVKMLKISADITSDDQGLIAFLKAVPKLESLVFDGYIN 522
           +   +L  +   +   ++  F ++  L I  + +   + L A LK  P LE+LVF+G ++
Sbjct: 265 LSANSLAVL--TFCCESIPVFNNLIQLTIKTNQSVGWESLPALLKNCPILETLVFEGLLH 322


>ref|NP_190484.3| FBD and preprotein translocase YidC domain-containing protein
           [Arabidopsis thaliana]
           gi|334302800|sp|Q9M3B7.2|FBL54_ARATH RecName:
           Full=Putative F-box/LRR-repeat protein At3g49150
           gi|332644984|gb|AEE78505.1| FBD and preprotein
           translocase YidC domain-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
 Frame = +1

Query: 10  ELFSNSTALEEL-ILDSCIYSMRSFCISIPTLKCLTIDCLNEEVNGLRDCVFKIDAPRLV 186
           +L ++   LE+L I++ C        +S  TLK LT  C  E+V+ +       D P LV
Sbjct: 190 KLITSCHVLEDLFIMNICWDGYLKRSLSSKTLKRLTFFC--EDVHAVNPESVSFDTPNLV 247

Query: 187 TFVYWGYGAKEFVLSSFEALVEATV----------YFNCQNNVGAVRISQFLRALAHVKC 336
            FVY    A ++   +F++LV A++          + + ++ VG    + FL  +++V+ 
Sbjct: 248 YFVYHDCVADKYKNMNFDSLVYASICLQMTSHQRTHASYEHLVG--NATDFLLGISNVQI 305

Query: 337 LTVYNPTLKAICSAYLSNNLLTFQHVKMLKISADITSDDQGLIAFLKAVPKLESLVFDG 513
           L ++  T++ +   +    +  F+++  L I  D  +  + L   LK  P LESL+FDG
Sbjct: 306 LELFANTIEVL--TFCCEQIPVFKNLVCLIIKTDQKAGWESLPVLLKNCPDLESLIFDG 362


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