BLASTX nr result
ID: Papaver23_contig00021600
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00021600
(786 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002889201.1| mechanosensitive ion channel domain-containi... 113 6e-42
ref|NP_177982.1| mechanosensitive channel of small conductance-l... 113 6e-42
gb|ADE76378.1| unknown [Picea sitchensis] 115 2e-40
ref|XP_003581523.1| PREDICTED: uncharacterized mscS family prote... 109 1e-39
ref|XP_002278453.1| PREDICTED: uncharacterized mscS family prote... 109 3e-39
>ref|XP_002889201.1| mechanosensitive ion channel domain-containing protein [Arabidopsis
lyrata subsp. lyrata] gi|297335042|gb|EFH65460.1|
mechanosensitive ion channel domain-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 857
Score = 113 bits (282), Expect(2) = 6e-42
Identities = 54/70 (77%), Positives = 60/70 (85%)
Frame = -2
Query: 515 LFVMHHFDVGDRCEIETVQMVVEEMNILNTVFLRFDNQKIIYPNSVLVTKPISNLYRSPD 336
LFV+H FDVGDRCEI+ VQMVVEEMNIL TVFLRFDNQK++YPNS+L TK I N YRSPD
Sbjct: 669 LFVIHPFDVGDRCEIDGVQMVVEEMNILTTVFLRFDNQKVVYPNSLLWTKSIGNYYRSPD 728
Query: 335 MGDAISKSIY 306
MGD I SI+
Sbjct: 729 MGDGIEFSIH 738
Score = 84.3 bits (207), Expect(2) = 6e-42
Identities = 47/91 (51%), Positives = 53/91 (58%)
Frame = -1
Query: 783 ETNRVSKKSLKNWVVNAFRERRALALTLDDTKTAVNQLHXXXXXXXXXXXXXXXXXXXXX 604
ETNR+SK SLKNWVVNAFRERRALALTL+DTKTAVN+LH
Sbjct: 576 ETNRISKSSLKNWVVNAFRERRALALTLNDTKTAVNRLHKMVNIVVGIIILVIWLIILGI 635
Query: 603 XXXXXXXXXXXXXXXVAFMFGNTCKMVFEAI 511
VAF+FGN CK+VFE+I
Sbjct: 636 TSTKFLVVMSSQVVVVAFIFGNMCKIVFESI 666
>ref|NP_177982.1| mechanosensitive channel of small conductance-like 6 [Arabidopsis
thaliana] gi|75213461|sp|Q9SYM1.1|MSL6_ARATH RecName:
Full=Mechanosensitive ion channel protein 6; AltName:
Full=Mechanosensitive channel of small conductance-like
6; AltName: Full=MscS-Like protein 6
gi|4836872|gb|AAD30575.1|AC007260_6 Hypothetical protein
[Arabidopsis thaliana] gi|332198006|gb|AEE36127.1|
mechanosensitive channel of small conductance-like 6
[Arabidopsis thaliana]
Length = 856
Score = 113 bits (282), Expect(2) = 6e-42
Identities = 54/70 (77%), Positives = 60/70 (85%)
Frame = -2
Query: 515 LFVMHHFDVGDRCEIETVQMVVEEMNILNTVFLRFDNQKIIYPNSVLVTKPISNLYRSPD 336
LFV+H FDVGDRCEI+ VQMVVEEMNIL TVFLRFDNQK++YPNS+L TK I N YRSPD
Sbjct: 668 LFVIHPFDVGDRCEIDGVQMVVEEMNILTTVFLRFDNQKVVYPNSLLWTKSIGNYYRSPD 727
Query: 335 MGDAISKSIY 306
MGD I SI+
Sbjct: 728 MGDGIEFSIH 737
Score = 84.3 bits (207), Expect(2) = 6e-42
Identities = 47/91 (51%), Positives = 53/91 (58%)
Frame = -1
Query: 783 ETNRVSKKSLKNWVVNAFRERRALALTLDDTKTAVNQLHXXXXXXXXXXXXXXXXXXXXX 604
ETNR+SK SLKNWVVNAFRERRALALTL+DTKTAVN+LH
Sbjct: 575 ETNRISKSSLKNWVVNAFRERRALALTLNDTKTAVNRLHKMVNIVVGIIILVIWLIILGI 634
Query: 603 XXXXXXXXXXXXXXXVAFMFGNTCKMVFEAI 511
VAF+FGN CK+VFE+I
Sbjct: 635 TSTKFLVVMSSQVVVVAFIFGNMCKIVFESI 665
>gb|ADE76378.1| unknown [Picea sitchensis]
Length = 290
Score = 115 bits (288), Expect(2) = 2e-40
Identities = 55/70 (78%), Positives = 60/70 (85%)
Frame = -2
Query: 515 LFVMHHFDVGDRCEIETVQMVVEEMNILNTVFLRFDNQKIIYPNSVLVTKPISNLYRSPD 336
LFVMH FDVGDRC IE VQMVVEEMNIL TVFLR+DN+KI YPN+VL TKPISN YRSPD
Sbjct: 114 LFVMHPFDVGDRCSIEGVQMVVEEMNILTTVFLRYDNEKIWYPNTVLATKPISNFYRSPD 173
Query: 335 MGDAISKSIY 306
MGD + SI+
Sbjct: 174 MGDGVDFSIH 183
Score = 77.0 bits (188), Expect(2) = 2e-40
Identities = 42/91 (46%), Positives = 50/91 (54%)
Frame = -1
Query: 783 ETNRVSKKSLKNWVVNAFRERRALALTLDDTKTAVNQLHXXXXXXXXXXXXXXXXXXXXX 604
++NRV+K +LKNW VN FRERRALALTL+DTKTAVN+LH
Sbjct: 21 DSNRVTKAALKNWAVNVFRERRALALTLNDTKTAVNKLHQMVNVVIGVVIIVIWLLILGI 80
Query: 603 XXXXXXXXXXXXXXXVAFMFGNTCKMVFEAI 511
V FMFGN+CKM FE+I
Sbjct: 81 ATTHILVVVSSQLLLVVFMFGNSCKMAFESI 111
>ref|XP_003581523.1| PREDICTED: uncharacterized mscS family protein At1g78610-like
[Brachypodium distachyon]
Length = 872
Score = 109 bits (273), Expect(2) = 1e-39
Identities = 50/70 (71%), Positives = 59/70 (84%)
Frame = -2
Query: 515 LFVMHHFDVGDRCEIETVQMVVEEMNILNTVFLRFDNQKIIYPNSVLVTKPISNLYRSPD 336
LFVMH FDVGDRCE++ +Q+VVEEMNI+ T+FLRFDN KI YPNSVL T PI N YRSPD
Sbjct: 692 LFVMHPFDVGDRCEVDGMQVVVEEMNIMTTIFLRFDNLKIYYPNSVLATLPIMNYYRSPD 751
Query: 335 MGDAISKSIY 306
MGDA+ S++
Sbjct: 752 MGDAVDFSVH 761
Score = 80.1 bits (196), Expect(2) = 1e-39
Identities = 45/91 (49%), Positives = 49/91 (53%)
Frame = -1
Query: 783 ETNRVSKKSLKNWVVNAFRERRALALTLDDTKTAVNQLHXXXXXXXXXXXXXXXXXXXXX 604
E NRVSK+SLKNWVVNAFRER+ALALTL+DTKTAVN LH
Sbjct: 599 ENNRVSKRSLKNWVVNAFRERKALALTLNDTKTAVNTLHHMANVVVALVVFALWLLILEI 658
Query: 603 XXXXXXXXXXXXXXXVAFMFGNTCKMVFEAI 511
FMFGNT K +FEAI
Sbjct: 659 ATTRFFVFLSSQLLVAVFMFGNTLKTIFEAI 689
>ref|XP_002278453.1| PREDICTED: uncharacterized mscS family protein At1g78610-like
[Vitis vinifera]
Length = 897
Score = 109 bits (273), Expect(2) = 3e-39
Identities = 50/65 (76%), Positives = 57/65 (87%)
Frame = -2
Query: 515 LFVMHHFDVGDRCEIETVQMVVEEMNILNTVFLRFDNQKIIYPNSVLVTKPISNLYRSPD 336
LFVMH FDVGDRCEI+ VQM+VEEMNIL TVFLR DNQKI++PNS L T+PI N YRSPD
Sbjct: 712 LFVMHPFDVGDRCEIDGVQMIVEEMNILTTVFLRGDNQKIVFPNSTLATRPIGNYYRSPD 771
Query: 335 MGDAI 321
MGD++
Sbjct: 772 MGDSV 776
Score = 79.0 bits (193), Expect(2) = 3e-39
Identities = 43/91 (47%), Positives = 52/91 (57%)
Frame = -1
Query: 783 ETNRVSKKSLKNWVVNAFRERRALALTLDDTKTAVNQLHXXXXXXXXXXXXXXXXXXXXX 604
++ ++SK +LKNWVVNAFRERRALALTL+DTKTAVN+LH
Sbjct: 619 QSGKISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHQMVNVVVVIIVLITSLLILGI 678
Query: 603 XXXXXXXXXXXXXXXVAFMFGNTCKMVFEAI 511
VAF+FGNTCK +FEAI
Sbjct: 679 ATKQFMTYLSSQLLLVAFIFGNTCKNIFEAI 709