BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00021532
         (929 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale]   588   e-166
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   509   e-142
emb|CBI16226.3| unnamed protein product [Vitis vinifera]              504   e-141
gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tu...   499   e-139
gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta]      491   e-137

>gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale]
          Length = 554

 Score =  588 bits (1515), Expect = e-166
 Identities = 292/309 (94%), Positives = 292/309 (94%)
 Frame = -1

Query: 929 RDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRPHAQMRVFVNL 750
           RDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRPHAQMRVFVNL
Sbjct: 49  RDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRPHAQMRVFVNL 108

Query: 749 TVFEKSYIKGRETLCPNDGFVYFRNSELICGQLGKATLGNGNKDGLFSVLLRDYDAHAAA 570
           TVFEKSYIKGRETLCPNDGFVYFRNSELICGQLGKATLGNGNKDGLFSVLLRDYDAHAAA
Sbjct: 109 TVFEKSYIKGRETLCPNDGFVYFRNSELICGQLGKATLGNGNKDGLFSVLLRDYDAHAAA 168

Query: 569 SCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXXXXXXXXKLIEHYKTGKLE 390
           SCMNRLAKLSARWIGN GFSIGISDVQPGKSLS               KLIEHYKTGKLE
Sbjct: 169 SCMNRLAKLSARWIGNQGFSIGISDVQPGKSLSDKKQKKIDKGKEKCDKLIEHYKTGKLE 228

Query: 389 LQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLIMSQCGSKGSPSNITQMIA 210
           LQPGCDAAQTLEAEITGI NNIREKAATVCMENLHWRNSPLIMSQCGSKGSPSNITQMIA
Sbjct: 229 LQPGCDAAQTLEAEITGIQNNIREKAATVCMENLHWRNSPLIMSQCGSKGSPSNITQMIA 288

Query: 209 CVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGLTATEFFFHTMGGREG 30
           CVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGLTATEFFFHTMGGREG
Sbjct: 289 CVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGLTATEFFFHTMGGREG 348

Query: 29  LVDTAVKTA 3
           LVDTAVKTA
Sbjct: 349 LVDTAVKTA 357


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score =  509 bits (1310), Expect = e-142
 Identities = 248/311 (79%), Positives = 272/311 (87%), Gaps = 2/311 (0%)
 Frame = -1

Query: 929  RDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRPHAQMRVFVNL 750
            +DTFYDRA+FSLMCSYMGD MD +DLPTPA+IKPVELWTGKQLFNVL+RPHA +RV++NL
Sbjct: 553  KDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLRPHANVRVYLNL 612

Query: 749  TVFEKSYIK--GRETLCPNDGFVYFRNSELICGQLGKATLGNGNKDGLFSVLLRDYDAHA 576
            TV EK+Y K  G+ET+CP+DGFVYFRNSELI GQLGKATLGNGNKDGLFSVLLRDY+AHA
Sbjct: 613  TVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNAHA 672

Query: 575  AASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXXXXXXXXKLIEHYKTGK 396
            AA+CMNRLAKLSARWIGNHGFSIGI DVQPG  L+               +LI+ Y  GK
Sbjct: 673  AAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCHELIQQYNKGK 732

Query: 395  LELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLIMSQCGSKGSPSNITQM 216
            L+LQPGC+AAQTLEAEITG+LN IRE  A VCME LHWRNSPLIMSQCGSKGSP NI+QM
Sbjct: 733  LKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGSKGSPINISQM 792

Query: 215  IACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGLTATEFFFHTMGGR 36
            IACVGQQSVGGRRA +GFIDR+LPHFPR S TPDAKGFV +SFYTGLTATEFFFHTMGGR
Sbjct: 793  IACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTATEFFFHTMGGR 852

Query: 35   EGLVDTAVKTA 3
            EGLVDTAVKTA
Sbjct: 853  EGLVDTAVKTA 863


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  504 bits (1299), Expect = e-141
 Identities = 246/311 (79%), Positives = 271/311 (87%), Gaps = 2/311 (0%)
 Frame = -1

Query: 929  RDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRPHAQMRVFVNL 750
            +DTFYDRA+FSLMCSYMGD MD +DLPTPA+IK +ELWTGKQLFNVL+RPHA +RV++NL
Sbjct: 553  KDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKAMELWTGKQLFNVLLRPHANVRVYLNL 612

Query: 749  TVFEKSYIK--GRETLCPNDGFVYFRNSELICGQLGKATLGNGNKDGLFSVLLRDYDAHA 576
            TV EK+Y K  G+ET+CP+DGFVYFRNSELI GQLGKATLGNGNKDGLFSVLLRDY+AHA
Sbjct: 613  TVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNAHA 672

Query: 575  AASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXXXXXXXXKLIEHYKTGK 396
            AA+CMNRLAKLSARWIGNHGFSIGI DVQPG  L+               +LI+ Y  GK
Sbjct: 673  AAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCHELIQQYNKGK 732

Query: 395  LELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLIMSQCGSKGSPSNITQM 216
            L+LQPGC+AAQTLEAEITG+LN IRE  A VCME LHWRNSPLIMSQCGSKGSP NI+QM
Sbjct: 733  LKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGSKGSPINISQM 792

Query: 215  IACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGLTATEFFFHTMGGR 36
            IACVGQQSVGGRRA +GFIDR+LPHFPR S TPDAKGFV +SFYTGLTATEFFFHTMGGR
Sbjct: 793  IACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTATEFFFHTMGGR 852

Query: 35   EGLVDTAVKTA 3
            EGLVDTAVKTA
Sbjct: 853  EGLVDTAVKTA 863


>gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tulipifera]
          Length = 546

 Score =  499 bits (1286), Expect = e-139
 Identities = 244/311 (78%), Positives = 268/311 (86%), Gaps = 2/311 (0%)
 Frame = -1

Query: 929 RDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRPHAQMRVFVNL 750
           +DTFYDRA+FSLMCSYMGD MD IDLPTPAL+KP+ELWTGKQLF+VLIRPHA+MRV++NL
Sbjct: 49  KDTFYDRAAFSLMCSYMGDGMDPIDLPTPALLKPIELWTGKQLFSVLIRPHARMRVYLNL 108

Query: 749 TVFEKSYIKGRE--TLCPNDGFVYFRNSELICGQLGKATLGNGNKDGLFSVLLRDYDAHA 576
           T+ E+ Y K ++  T+CPNDG+VYFRNSEL+CGQLGKATLGNGNKDGLFSVLLRDY AHA
Sbjct: 109 TLTERIYDKSKDKKTMCPNDGYVYFRNSELLCGQLGKATLGNGNKDGLFSVLLRDYGAHA 168

Query: 575 AASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXXXXXXXXKLIEHYKTGK 396
           AASCMNRLAKLSARWIGNHGFSIGI DVQPG+ L+                LI  Y TG 
Sbjct: 169 AASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKKLEIEKGYKECDDLINRYNTGG 228

Query: 395 LELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLIMSQCGSKGSPSNITQM 216
           L+L PGC+AAQTLE+ ITG LN+IRE AA VCM +LHWRNSPLIMSQCGSKGSP NI+QM
Sbjct: 229 LKLLPGCNAAQTLESNITGKLNDIREAAAKVCMASLHWRNSPLIMSQCGSKGSPINISQM 288

Query: 215 IACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGLTATEFFFHTMGGR 36
           +ACVGQQSVGGRRA NGFIDRSLPHFP NS TP AKGFV NSFYTGLTATEFFFHTMGGR
Sbjct: 289 VACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPSAKGFVANSFYTGLTATEFFFHTMGGR 348

Query: 35  EGLVDTAVKTA 3
           EGLVDTAVKTA
Sbjct: 349 EGLVDTAVKTA 359


>gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta]
          Length = 548

 Score =  491 bits (1265), Expect = e-137
 Identities = 240/309 (77%), Positives = 263/309 (85%)
 Frame = -1

Query: 929 RDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRPHAQMRVFVNL 750
           +DTFYDRA+F LMCSYMGDA++ IDLPTP ++KP+ELWTGKQLF+VL+RP+A +RVFVNL
Sbjct: 51  KDTFYDRATFCLMCSYMGDAVEPIDLPTPTILKPIELWTGKQLFSVLVRPNANVRVFVNL 110

Query: 749 TVFEKSYIKGRETLCPNDGFVYFRNSELICGQLGKATLGNGNKDGLFSVLLRDYDAHAAA 570
            + EK+Y K RET+CPNDGFVYFRNSELI GQ+GKATLGNGNKDGLF+VLLRDY+ HAAA
Sbjct: 111 MLAEKNYSKSRETMCPNDGFVYFRNSELISGQIGKATLGNGNKDGLFTVLLRDYNTHAAA 170

Query: 569 SCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXXXXXXXXKLIEHYKTGKLE 390
           S MNRLAKLSARWIGNHGFSIGI DVQPG  LS                 I+ Y  GKL 
Sbjct: 171 SSMNRLAKLSARWIGNHGFSIGIDDVQPGTRLSAQKEERIKEGYSKCDMHIDLYNKGKLT 230

Query: 389 LQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLIMSQCGSKGSPSNITQMIA 210
           LQPGC+AAQTLEAEITG LN IRE A +VC++ LHWRNSPLIMSQCGSKGSP NI+QMIA
Sbjct: 231 LQPGCNAAQTLEAEITGELNKIREIAGSVCLKELHWRNSPLIMSQCGSKGSPINISQMIA 290

Query: 209 CVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGLTATEFFFHTMGGREG 30
           CVGQQSVGGRRA NGFIDRSLPHFPRN  TP AKGFV NSFYTGLTATEFFFHTMGGREG
Sbjct: 291 CVGQQSVGGRRAPNGFIDRSLPHFPRNDKTPAAKGFVANSFYTGLTATEFFFHTMGGREG 350

Query: 29  LVDTAVKTA 3
           LVDTAVKTA
Sbjct: 351 LVDTAVKTA 359