BLASTX nr result

ID: Papaver23_contig00021523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00021523
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270117.1| PREDICTED: ribulose bisphosphate carboxylase...   279   2e-73
ref|XP_003610095.1| Ribulose bisphosphate carboxylase small chai...   259   3e-67
gb|AFK34410.1| unknown [Lotus japonicus]                              255   4e-66
gb|AFK37376.1| unknown [Lotus japonicus]                              252   3e-65
ref|XP_002325043.1| predicted protein [Populus trichocarpa] gi|1...   251   5e-65

>ref|XP_002270117.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
           chloroplastic [Vitis vinifera]
           gi|297735404|emb|CBI17844.3| unnamed protein product
           [Vitis vinifera]
          Length = 169

 Score =  279 bits (714), Expect = 2e-73
 Identities = 125/169 (73%), Positives = 144/169 (85%)
 Frame = +2

Query: 71  MSAGIIAVPVAVSGHAGLKTVSTKMFSPKTSIGWGEKVVSNGSRTHCMKTWNPIENKKHE 250
           M+AGI++ PV   G+ GLK    K+F  K S+ W  K VSNGS+THCMKTWNPI NKK E
Sbjct: 1   MAAGILSGPVTSFGYVGLKPHQPKLFPAKDSVAWSRKTVSNGSKTHCMKTWNPINNKKFE 60

Query: 251 TLSYLPPLSNESIAKEIDYMLSKGWIPCLEFDEVGHVYRTNSKMPGYYDGRYWTLWKLPM 430
           TLSYLPPLS++SIAKEIDYML KGWIPCLEFDEVG+V+R NS++PGYYDGRYWTLWKLPM
Sbjct: 61  TLSYLPPLSDDSIAKEIDYMLKKGWIPCLEFDEVGYVFRKNSQIPGYYDGRYWTLWKLPM 120

Query: 431 FGCTDATQVLNEMQECKETYPNAYIRCLAFDNQKQVQCMAFIIQKPSSS 577
           FGC DA+QVLNE+ ECK+TYPNAYIRCLAFDN+ Q QCMAF+IQKP+ S
Sbjct: 121 FGCNDASQVLNEIHECKKTYPNAYIRCLAFDNEHQGQCMAFVIQKPTCS 169


>ref|XP_003610095.1| Ribulose bisphosphate carboxylase small chain [Medicago truncatula]
           gi|355511150|gb|AES92292.1| Ribulose bisphosphate
           carboxylase small chain [Medicago truncatula]
           gi|388491552|gb|AFK33842.1| unknown [Medicago
           truncatula]
          Length = 173

 Score =  259 bits (661), Expect = 3e-67
 Identities = 119/172 (69%), Positives = 141/172 (81%), Gaps = 1/172 (0%)
 Frame = +2

Query: 71  MSAGIIAVPVAVSGHAGLKTVSTKMFSPKT-SIGWGEKVVSNGSRTHCMKTWNPIENKKH 247
           MSAG  A PVA  G  GLK+ S+ ++   T SI W +K VSNGS+ HCMKTWNPI NKK 
Sbjct: 1   MSAGTFAAPVAGPGFVGLKSNSSSLWPSATYSIEWKKKTVSNGSKIHCMKTWNPINNKKF 60

Query: 248 ETLSYLPPLSNESIAKEIDYMLSKGWIPCLEFDEVGHVYRTNSKMPGYYDGRYWTLWKLP 427
           ETLSYLPPLS++SIAKEIDYML K W PCLEFDE G ++R NS+MPGYYDGRYWTLWKLP
Sbjct: 61  ETLSYLPPLSDDSIAKEIDYMLKKRWTPCLEFDEFGCIHRANSQMPGYYDGRYWTLWKLP 120

Query: 428 MFGCTDATQVLNEMQECKETYPNAYIRCLAFDNQKQVQCMAFIIQKPSSSFT 583
           MFGC D++QVLNE+ ECK+TYPNAYIRCLAFDN++ +Q MAF+I KP+++ T
Sbjct: 121 MFGCNDSSQVLNEINECKKTYPNAYIRCLAFDNKRHMQAMAFVIHKPTTTTT 172


>gb|AFK34410.1| unknown [Lotus japonicus]
          Length = 173

 Score =  255 bits (651), Expect = 4e-66
 Identities = 115/171 (67%), Positives = 137/171 (80%)
 Frame = +2

Query: 71  MSAGIIAVPVAVSGHAGLKTVSTKMFSPKTSIGWGEKVVSNGSRTHCMKTWNPIENKKHE 250
           MSAG     VA +G  GLK+ S+ ++       W  K  SNGS+T CMKTWNPI N+K E
Sbjct: 1   MSAGTFTALVAGAGFVGLKSNSSNLYPVTGFNEWRSKTTSNGSKTLCMKTWNPINNRKFE 60

Query: 251 TLSYLPPLSNESIAKEIDYMLSKGWIPCLEFDEVGHVYRTNSKMPGYYDGRYWTLWKLPM 430
           TLSYLPPL++ESIAKE+DYML KGWIPCLEFDE+GH+ R NS+MPGYYDGRYWTLWKLPM
Sbjct: 61  TLSYLPPLTDESIAKEVDYMLKKGWIPCLEFDELGHIRRENSRMPGYYDGRYWTLWKLPM 120

Query: 431 FGCTDATQVLNEMQECKETYPNAYIRCLAFDNQKQVQCMAFIIQKPSSSFT 583
           FGC D++QVLNE+QECK  YPNAYIRC+AFDN + +Q MAFIIQKP+++ T
Sbjct: 121 FGCNDSSQVLNEIQECKRAYPNAYIRCIAFDNHRHMQSMAFIIQKPAANTT 171


>gb|AFK37376.1| unknown [Lotus japonicus]
          Length = 173

 Score =  252 bits (644), Expect = 3e-65
 Identities = 114/171 (66%), Positives = 136/171 (79%)
 Frame = +2

Query: 71  MSAGIIAVPVAVSGHAGLKTVSTKMFSPKTSIGWGEKVVSNGSRTHCMKTWNPIENKKHE 250
           MSAG     VA +G  GLK+ S+ ++       W  K  SNGS+T CMKTWNPI N+K E
Sbjct: 1   MSAGTFTALVAGAGFVGLKSNSSNLYPVTGFNEWKSKTTSNGSKTLCMKTWNPINNRKFE 60

Query: 251 TLSYLPPLSNESIAKEIDYMLSKGWIPCLEFDEVGHVYRTNSKMPGYYDGRYWTLWKLPM 430
           TLSYLPPL++ESIAKE+DYML KGWIPCLEFDE+GH+ R NS+MPGYYDGRYWTLWKLPM
Sbjct: 61  TLSYLPPLTDESIAKEVDYMLKKGWIPCLEFDELGHIRRENSRMPGYYDGRYWTLWKLPM 120

Query: 431 FGCTDATQVLNEMQECKETYPNAYIRCLAFDNQKQVQCMAFIIQKPSSSFT 583
           F C D++QVLNE+QECK  YPNAYIRC+AFDN + +Q MAFIIQKP+++ T
Sbjct: 121 FDCNDSSQVLNEIQECKRAYPNAYIRCIAFDNHRHMQSMAFIIQKPAANTT 171


>ref|XP_002325043.1| predicted protein [Populus trichocarpa] gi|118488515|gb|ABK96070.1|
           unknown [Populus trichocarpa]
           gi|222866477|gb|EEF03608.1| predicted protein [Populus
           trichocarpa]
          Length = 170

 Score =  251 bits (642), Expect = 5e-65
 Identities = 118/170 (69%), Positives = 137/170 (80%), Gaps = 2/170 (1%)
 Frame = +2

Query: 71  MSAGIIAVP-VAVSGHAGLKTVSTKM-FSPKTSIGWGEKVVSNGSRTHCMKTWNPIENKK 244
           MSAGI A   VA  G+ GL+ + TK  F+ K S+    + VSNGS+T CMKTWNPI NKK
Sbjct: 1   MSAGIFAASAVAAPGYHGLRALPTKQPFATKNSVARSSRTVSNGSKTFCMKTWNPINNKK 60

Query: 245 HETLSYLPPLSNESIAKEIDYMLSKGWIPCLEFDEVGHVYRTNSKMPGYYDGRYWTLWKL 424
            E LSYLPPLS +SIAKEIDYM+ KGWIPCLEFDEVG V R +S+MPGYYDGRYWTLWKL
Sbjct: 61  FEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVGSVRREHSRMPGYYDGRYWTLWKL 120

Query: 425 PMFGCTDATQVLNEMQECKETYPNAYIRCLAFDNQKQVQCMAFIIQKPSS 574
           PMFGCTD++QVL E+ ECK+ YP+AYIRCLAFDN+ Q QCMAF+IQKP +
Sbjct: 121 PMFGCTDSSQVLEEIHECKKAYPDAYIRCLAFDNKHQGQCMAFVIQKPGN 170


Top