BLASTX nr result

ID: Papaver23_contig00021508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00021508
         (703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu...   257   1e-66
ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2...   252   4e-65
emb|CBI28414.3| unnamed protein product [Vitis vinifera]              225   6e-57
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin...   225   6e-57
ref|XP_002529054.1| RNA binding protein, putative [Ricinus commu...   206   4e-51

>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
            gi|223525472|gb|EEF28048.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 578

 Score =  257 bits (657), Expect = 1e-66
 Identities = 139/235 (59%), Positives = 169/235 (71%), Gaps = 1/235 (0%)
 Frame = +2

Query: 2    GTAAGARQIYLTFPADSTFTEEDVSNYFKGFGPVQDVRIPCQQKRMFGFVTFVYPETVKI 181
            G  AG+RQIYLTFPA+S FTE DVS YF  FGPVQDVRIPCQQKRMFGFVTF++ ETVK 
Sbjct: 346  GIVAGSRQIYLTFPAESIFTEHDVSIYFSKFGPVQDVRIPCQQKRMFGFVTFIFVETVKQ 405

Query: 182  ILAQGNPHFVCGARVLVKPYREKSRLVADRKYSEKNDNSMYYPSHILDVHDPEDYSVSRV 361
            ILA+GNPH+VCGARVLVKPYREKSRL+ DRK+SEK  + MY  SH +D  D E + +  +
Sbjct: 406  ILAKGNPHYVCGARVLVKPYREKSRLI-DRKFSEKLQHPMYNSSHFID-GDSELHPMPTI 463

Query: 362  YDTSRLLKKQFIXXXXXXXXXXXXXXXXMHLATKSLAHQPYLG-FMDDVRLSEDHNQYTS 538
             D SRLL+KQ +                 HL  KSL HQ YLG  MD+++LSE+H ++ S
Sbjct: 464  SDNSRLLRKQLMEENEHALEFERRRLLEFHLGPKSLNHQSYLGCSMDELKLSEEHAEFPS 523

Query: 539  TADRFSYFLDMLNSGSVPDDKAGNCSSNYGEQEGSQGINLPESPFASQITNSIPT 703
             A+RF+Y LD+LN+GS  + K    S+NY +Q+ SQGINLPESPFAS I + I T
Sbjct: 524  -AERFNYLLDVLNNGSSSEGKFRRISTNYNDQD-SQGINLPESPFASPIRSGIST 576


>ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1|
            predicted protein [Populus trichocarpa]
          Length = 554

 Score =  252 bits (644), Expect = 4e-65
 Identities = 134/235 (57%), Positives = 163/235 (69%), Gaps = 1/235 (0%)
 Frame = +2

Query: 2    GTAAGARQIYLTFPADSTFTEEDVSNYFKGFGPVQDVRIPCQQKRMFGFVTFVYPETVKI 181
            G  AG+RQIYLTFPA+STFTE+DVSNYF  FGPVQDVRIPCQQKRMFGFVTFV+ ETVK 
Sbjct: 320  GIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQ 379

Query: 182  ILAQGNPHFVCGARVLVKPYREKSRLVADRKYSEKNDNSMYYPSHILDVHDPEDYSVSRV 361
            IL++GNPH VCGARVLVKPYREKSRLV DRKY+EK  +  +Y  H +D  D E +SV RV
Sbjct: 380  ILSKGNPHHVCGARVLVKPYREKSRLV-DRKYAEKIQHPFFYSQHFID-GDSELHSVPRV 437

Query: 362  YDTSRLLKKQFIXXXXXXXXXXXXXXXXMHLATKSLAHQPYLGF-MDDVRLSEDHNQYTS 538
             D SRLL+KQ +                  LA K LA   Y G  MD+ +LSE+      
Sbjct: 438  CDNSRLLRKQLMEEHEQALELERRRLSEFQLAPKPLARHAYHGHSMDEFKLSEEQADQFP 497

Query: 539  TADRFSYFLDMLNSGSVPDDKAGNCSSNYGEQEGSQGINLPESPFASQITNSIPT 703
            +A+ F+Y+ D+LN+GS  ++K  +  +N  EQ+ +QG+NLPESPFAS I   I T
Sbjct: 498  SAEHFNYWFDVLNNGSTSEEKHRHTRTNCSEQDSNQGVNLPESPFASAIGKGIST 552


>emb|CBI28414.3| unnamed protein product [Vitis vinifera]
          Length = 525

 Score =  225 bits (574), Expect = 6e-57
 Identities = 126/234 (53%), Positives = 155/234 (66%), Gaps = 5/234 (2%)
 Frame = +2

Query: 17  ARQIYLTFPADSTFTEEDVSNYFKGFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAQG 196
           ++QIYLTFPADSTFTE+DVSNYF  FGPVQDVRIPCQQKRMFGFVTFV+ ETVK IL +G
Sbjct: 300 SKQIYLTFPADSTFTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKG 359

Query: 197 NPHFVCGARVLVKPYREKSRLVADRKYSEKNDNSMYYPSHILDVHDPEDYSVSRVYDTSR 376
           NPH++CGARVLVKPYREK    A  +  ++  + MYY  H +D  D E  S+ RV D SR
Sbjct: 360 NPHYICGARVLVKPYREK----ASSRTVDRRQHPMYYSPHFID-EDSELQSIPRVCDNSR 414

Query: 377 LLKKQFIXXXXXXXXXXXXXXXXMHLATKSLAHQPYLGF-MDDVRLSED--HNQYTS--T 541
           LL+KQ +                    T   AH PY G+ MD+ +   D  H +     +
Sbjct: 415 LLRKQQLMEEHEQALELERRRLSELQLTPKTAH-PYFGYSMDEFKQHSDAAHAEQAEFPS 473

Query: 542 ADRFSYFLDMLNSGSVPDDKAGNCSSNYGEQEGSQGINLPESPFASQITNSIPT 703
           A+R +Y L++LN+GS  +D+    S+NY EQE SQG+NLPESPFAS I NSI T
Sbjct: 474 AERLNYLLEVLNNGSTSEDR----STNYNEQESSQGLNLPESPFASPIRNSIST 523


>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like [Vitis
            vinifera]
          Length = 572

 Score =  225 bits (574), Expect = 6e-57
 Identities = 126/234 (53%), Positives = 155/234 (66%), Gaps = 5/234 (2%)
 Frame = +2

Query: 17   ARQIYLTFPADSTFTEEDVSNYFKGFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAQG 196
            ++QIYLTFPADSTFTE+DVSNYF  FGPVQDVRIPCQQKRMFGFVTFV+ ETVK IL +G
Sbjct: 347  SKQIYLTFPADSTFTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKG 406

Query: 197  NPHFVCGARVLVKPYREKSRLVADRKYSEKNDNSMYYPSHILDVHDPEDYSVSRVYDTSR 376
            NPH++CGARVLVKPYREK    A  +  ++  + MYY  H +D  D E  S+ RV D SR
Sbjct: 407  NPHYICGARVLVKPYREK----ASSRTVDRRQHPMYYSPHFID-EDSELQSIPRVCDNSR 461

Query: 377  LLKKQFIXXXXXXXXXXXXXXXXMHLATKSLAHQPYLGF-MDDVRLSED--HNQYTS--T 541
            LL+KQ +                    T   AH PY G+ MD+ +   D  H +     +
Sbjct: 462  LLRKQQLMEEHEQALELERRRLSELQLTPKTAH-PYFGYSMDEFKQHSDAAHAEQAEFPS 520

Query: 542  ADRFSYFLDMLNSGSVPDDKAGNCSSNYGEQEGSQGINLPESPFASQITNSIPT 703
            A+R +Y L++LN+GS  +D+    S+NY EQE SQG+NLPESPFAS I NSI T
Sbjct: 521  AERLNYLLEVLNNGSTSEDR----STNYNEQESSQGLNLPESPFASPIRNSIST 570


>ref|XP_002529054.1| RNA binding protein, putative [Ricinus communis]
           gi|223531534|gb|EEF33365.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 551

 Score =  206 bits (524), Expect = 4e-51
 Identities = 119/232 (51%), Positives = 150/232 (64%), Gaps = 1/232 (0%)
 Frame = +2

Query: 11  AGARQIYLTFPADSTFTEEDVSNYFKGFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILA 190
           +G+RQIYLTFPA+STFTE+DVSNYF  FGPV+DVRIPCQQKRMFGFVTF   +TVKIILA
Sbjct: 339 SGSRQIYLTFPAESTFTEDDVSNYFNKFGPVEDVRIPCQQKRMFGFVTFESADTVKIILA 398

Query: 191 QGNPHFVCGARVLVKPYREKSRLVADRKYSEKNDNSMYYPSHILDVHDPEDYSVSRVYDT 370
           +GNPHFVC ARVLVKPYRE   L+             Y+ SH +D+ D E +S+SR Y+T
Sbjct: 399 KGNPHFVCNARVLVKPYRENQSLL------------XYFSSHYVDM-DAELHSMSRGYET 445

Query: 371 SRLLKKQFIXXXXXXXXXXXXXXXXMHLATKSLAHQPYLGF-MDDVRLSEDHNQYTSTAD 547
           SRLL+KQ +                     K ++H  Y  + MD  ++SED+ +      
Sbjct: 446 SRLLRKQLLEEQEQALELERRQRLAELRIRKPVSHHSYFDYPMDGFKVSEDNFELP---- 501

Query: 548 RFSYFLDMLNSGSVPDDKAGNCSSNYGEQEGSQGINLPESPFASQITNSIPT 703
              + LD +N GS  DDK  +  +NY +Q+ SQG+NLPESPFAS I +SI T
Sbjct: 502 --YHVLDFIN-GSGNDDKIRHIETNYADQD-SQGLNLPESPFASAIPSSIST 549


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