BLASTX nr result

ID: Papaver23_contig00021482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00021482
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318430.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002874183.1| predicted protein [Arabidopsis lyrata subsp....    57   1e-06
ref|NP_197816.3| gamma-irradiation and mitomycin c induced 1 [Ar...    55   6e-06
dbj|BAB10394.1| unnamed protein product [Arabidopsis thaliana]         55   6e-06

>ref|XP_002318430.1| predicted protein [Populus trichocarpa] gi|222859103|gb|EEE96650.1|
           predicted protein [Populus trichocarpa]
          Length = 622

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +2

Query: 368 TGKSRRPVEFQVNGEDLAEIQGGEVAITNLRSC 466
           TGK+ RPVEFQVNG DLAEI GGEV+ITNL SC
Sbjct: 419 TGKTTRPVEFQVNGIDLAEIDGGEVSITNLHSC 451


>ref|XP_002874183.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320020|gb|EFH50442.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1607

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +2

Query: 368 TGKSRRPVEFQVNGEDLAEIQGGEVAITNLRS 463
           TG++ RPVEFQVNGEDLAEI GGEVAITNL S
Sbjct: 365 TGRTERPVEFQVNGEDLAEITGGEVAITNLHS 396


>ref|NP_197816.3| gamma-irradiation and mitomycin c induced 1 [Arabidopsis thaliana]
           gi|332005896|gb|AED93279.1| gamma-irradiation and
           mitomycin c induced 1 [Arabidopsis thaliana]
          Length = 1598

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = +2

Query: 368 TGKSRRPVEFQVNGEDLAEIQGGEVAITNLRS 463
           TG++ RPV FQVNGEDLAEI GGEVAITNL S
Sbjct: 369 TGRTERPVAFQVNGEDLAEIAGGEVAITNLHS 400


>dbj|BAB10394.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1634

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = +2

Query: 368 TGKSRRPVEFQVNGEDLAEIQGGEVAITNLRS 463
           TG++ RPV FQVNGEDLAEI GGEVAITNL S
Sbjct: 378 TGRTERPVAFQVNGEDLAEIAGGEVAITNLHS 409


Top