BLASTX nr result

ID: Papaver23_contig00021461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00021461
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...    75   1e-11
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]    75   1e-11
ref|XP_003623305.1| Proliferation-associated protein 2G4 [Medica...    67   2e-09
gb|ACJ85304.1| unknown [Medicago truncatula] gi|388505826|gb|AFK...    67   2e-09
ref|XP_002262986.2| PREDICTED: proliferation-associated protein ...    66   4e-09

>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Vitis vinifera]
           gi|296090002|emb|CBI39821.3| unnamed protein product
           [Vitis vinifera]
          Length = 602

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 45/96 (46%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
 Frame = -1

Query: 278 GQVVMRARYKNNGVKDPGIQGVLIMTEDKLDFSPDDLKLSSRLNVGFGSIKGKRISQ--- 108
           G+V+ RARYK + VKD G+ GVL MTEDK  F P+D   S+R +V F  IKG + S+   
Sbjct: 3   GEVLKRARYKTS-VKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGS 61

Query: 107 -KQALLMLIQKPTYGCDKSYTFEFDKFAERDICLEF 3
            K ALL L Q    G    Y FEF+ + +R++C EF
Sbjct: 62  NKPALLNLTQDSEKG--GGYIFEFENYPDREVCREF 95


>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
          Length = 735

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 45/96 (46%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
 Frame = -1

Query: 278 GQVVMRARYKNNGVKDPGIQGVLIMTEDKLDFSPDDLKLSSRLNVGFGSIKGKRISQ--- 108
           G+V+ RARYK + VKD G+ GVL MTEDK  F P+D   S+R +V F  IKG + S+   
Sbjct: 3   GEVLKRARYKTS-VKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGS 61

Query: 107 -KQALLMLIQKPTYGCDKSYTFEFDKFAERDICLEF 3
            K ALL L Q    G    Y FEF+ + +R++C EF
Sbjct: 62  NKPALLNLTQDSEKG--GGYIFEFENYPDREVCREF 95


>ref|XP_003623305.1| Proliferation-associated protein 2G4 [Medicago truncatula]
           gi|355498320|gb|AES79523.1| Proliferation-associated
           protein 2G4 [Medicago truncatula]
          Length = 394

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
 Frame = -1

Query: 515 SNISYKVVAAYDCKTVQGSYSAISSSRLWDPNKVVLSLPSPDTRVDDAEFEKDEVY---V 345
           S+   KV AAYDCK V+G  S      + D NKVVLS+ +PDTRVDDAEFE++EVY   +
Sbjct: 165 SDAIQKVAAAYDCKIVEGVLSHQLKQFVIDGNKVVLSISNPDTRVDDAEFEENEVYAIDI 224

Query: 344 IVRTGE 327
           +  TGE
Sbjct: 225 VTSTGE 230


>gb|ACJ85304.1| unknown [Medicago truncatula] gi|388505826|gb|AFK40979.1| unknown
           [Medicago truncatula]
          Length = 394

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
 Frame = -1

Query: 515 SNISYKVVAAYDCKTVQGSYSAISSSRLWDPNKVVLSLPSPDTRVDDAEFEKDEVY---V 345
           S+   KV AAYDCK V+G  S      + D NKVVLS+ +PDTRVDDAEFE++EVY   +
Sbjct: 165 SDAIQKVAAAYDCKIVEGVLSHQLKQFVIDGNKVVLSISNPDTRVDDAEFEENEVYAIDI 224

Query: 344 IVRTGE 327
           +  TGE
Sbjct: 225 VTSTGE 230


>ref|XP_002262986.2| PREDICTED: proliferation-associated protein 2G4-like [Vitis
           vinifera] gi|296081116|emb|CBI18248.3| unnamed protein
           product [Vitis vinifera]
          Length = 394

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 3/61 (4%)
 Frame = -1

Query: 500 KVVAAYDCKTVQGSYSAISSSRLWDPNKVVLSLPSPDTRVDDAEFEKDEVY---VIVRTG 330
           KV AAYDCK V+G  S      + D NKVVLS+PSP+TRV+DAEFE++EVY   ++  TG
Sbjct: 170 KVAAAYDCKIVEGVLSHQLKQFVIDGNKVVLSVPSPETRVEDAEFEENEVYAVDIVTSTG 229

Query: 329 E 327
           +
Sbjct: 230 D 230


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