BLASTX nr result

ID: Papaver23_contig00021440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00021440
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    60   3e-07
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    57   2e-06
ref|XP_002534512.1| conserved hypothetical protein [Ricinus comm...    56   5e-06
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    56   5e-06

>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
 Frame = -1

Query: 659 TNEYKVVIIIFENKTK------------FMEVYVYTLGSGNGWRNLGKFNFGTINHWGEG 516
           TNEYKV+ I++                   +V + TLG   GWR+LGK ++  +    E 
Sbjct: 176 TNEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGCP-GWRSLGKVSYRLVRRASET 234

Query: 515 LYFNGSLYWM-----DSHLRKIVTFDLAEEKXXXXXXXXXXXDYFQRYELGVLDGCLSFA 351
           L  NG L+W+     +   R++V+FDL +E+                Y L VL GCLS A
Sbjct: 235 LV-NGRLHWVSRPCRNKPARRLVSFDLTDEQFREVPKPDCGGLNRCDYHLAVLRGCLSVA 293

Query: 350 IYGQINEAEYWDVWLLKNKDDNHGMKEREGHQSLGWSKEFRV 225
           +Y      E   +W++K     + +KE        W KE+ +
Sbjct: 294 VYCNYGRLE---IWVMK----EYNVKE-------SWVKEYNI 321


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 51/161 (31%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
 Frame = -1

Query: 659 TNEYKVVIIIFENK-----TKFM-------EVYVYTLGSGNGWRNLGKFNFGTINHWGEG 516
           T  YKVV +++        ++F        EV V TLGS   WR+LGK ++  ++ W   
Sbjct: 177 TEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPT-WRSLGKVSY-QLDRWPSE 234

Query: 515 LYFNGSLYWMDSHLRK----IVTFDLAEEKXXXXXXXXXXXDYFQRYELGVLDGCLSFAI 348
              NG L+W+    R     IV+FDLA+E+                Y L VL GCLS A+
Sbjct: 235 ALVNGRLHWVTRPRRYVTRFIVSFDLADEQFREIPKPDCGGLSRCNYHLLVLGGCLSAAV 294

Query: 347 YGQINEAEYWDVWLLKNKDDNHGMKEREGHQSLGWSKEFRV 225
           +    + E   VW++K  D    +KE        W KEF +
Sbjct: 295 HRSNGKLE---VWVMKEYD----VKE-------SWIKEFNI 321


>ref|XP_002534512.1| conserved hypothetical protein [Ricinus communis]
           gi|223525141|gb|EEF27869.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 383

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
 Frame = -1

Query: 605 EVYVYTLGSGNGWRNLGKFNFGTINHWGEGLYFNGSLYWMDSHLR-----KIVTFDLAEE 441
           EV + T+GS + WR+LG+  +  I H    +Y NG L+W++  +R     K+++FDL +E
Sbjct: 188 EVQILTVGSPS-WRSLGETPYYPI-HSPSQVYVNGRLHWVNWPVRYRPGRKLISFDLEDE 245

Query: 440 KXXXXXXXXXXXDYFQRYELGVLDGCLSFAIYGQINEAEYWDVWLLKNKDDNHGMKEREG 261
           K             +  Y L V+  CLS A+Y        ++VW++K    ++G+KE   
Sbjct: 246 KFREVPLPGSDGIKWGDYMLVVIRDCLSAAVYRNYGS---FEVWVMK----DYGLKE--- 295

Query: 260 HQSLGWSKEFRV 225
                W KEF +
Sbjct: 296 ----SWIKEFSI 303


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 17/162 (10%)
 Frame = -1

Query: 659 TNEYKVVIIIFENKTK------------FMEVYVYTLGSGNGWRNLGKFNFGTINHWGEG 516
           T EYKV+ I++                   EV + TLG    WR+LGK ++  +     G
Sbjct: 177 TKEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCPE-WRSLGKVSYRLVRR-ASG 234

Query: 515 LYFNGSLYWM-----DSHLRKIVTFDLAEEKXXXXXXXXXXXDYFQRYELGVLDGCLSFA 351
              NG L+W+     +   R++V+FDL +E+                Y L VL GCLS A
Sbjct: 235 ALVNGRLHWISRPCRNKPARRLVSFDLTDEQFREVSKPDCGGLNRCNYHLVVLRGCLSAA 294

Query: 350 IYGQINEAEYWDVWLLKNKDDNHGMKEREGHQSLGWSKEFRV 225
           +Y      E   +W++K     + +KE        W KE+ +
Sbjct: 295 VYCNYGRLE---IWVMK----EYNVKE-------SWVKEYNI 322


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