BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00021393
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADW19586.1| RNA polymerase III large subunit [Rhododendron ey...    45   7e-16

>gb|ADW19586.1| RNA polymerase III large subunit [Rhododendron eymae]
          Length = 207

 Score = 45.4 bits (106), Expect(4) = 7e-16
 Identities = 20/31 (64%), Positives = 26/31 (83%)
 Frame = -3

Query: 346 SRCKETLCQNEGFVYIQNSELI*GQVGEATL 254
           S+  ET+C N+GFVY +NSELI GQ+G+ATL
Sbjct: 38  SKSGETMCPNDGFVYFRNSELICGQLGKATL 68



 Score = 43.9 bits (102), Expect(4) = 7e-16
 Identities = 21/36 (58%), Positives = 26/36 (72%)
 Frame = -2

Query: 428 KQLFSVLIRPRAQIRVCVNLTVAEKSYEQVQRNIVP 321
           KQLFSVL+RP A +RV VNLTV EK+Y +    + P
Sbjct: 11  KQLFSVLLRPHANMRVYVNLTVREKNYSKSGETMCP 46



 Score = 36.6 bits (83), Expect(4) = 7e-16
 Identities = 26/76 (34%), Positives = 34/76 (44%)
 Frame = -3

Query: 229 VLDWY*KQINDALLQKYKNGTLIVQPGCDLLKHSNLS*LIF*MALERKLERFVWEPXXXX 50
           +LD Y K   D L+Q Y  G L +QPGCD  +            LE ++  F+       
Sbjct: 130 ILDGYGKC--DELIQSYNKGMLKLQPGCDAAQ-----------TLEAQISSFL-NNIRET 175

Query: 49  XXXXXXXKLHWRNSPL 2
                  +LHWRNSPL
Sbjct: 176 TANVCMEELHWRNSPL 191



 Score = 21.6 bits (44), Expect(4) = 7e-16
 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -1

Query: 273 KLVKLL*CSLDW--NHGFLIGIEN 208
           KL KL   S  W  NHGF IGI++
Sbjct: 95  KLAKL---SARWIGNHGFSIGIDD 115