BLASTX nr result

ID: Papaver23_contig00021301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00021301
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531700.1| PREDICTED: (6-4)DNA photolyase-like [Glycine...   166   4e-39
dbj|BAJ53248.1| JHL25H03.11 [Jatropha curcas]                         166   4e-39
ref|XP_002517574.1| DNA photolyase, putative [Ricinus communis] ...   164   2e-38
ref|NP_566520.1| (6-4)DNA photolyase [Arabidopsis thaliana] gi|3...   163   4e-38
pdb|3FY4|A Chain A, (6-4) Photolyase Crystal Structure gi|228312...   163   4e-38

>ref|XP_003531700.1| PREDICTED: (6-4)DNA photolyase-like [Glycine max]
          Length = 535

 Score =  166 bits (420), Expect = 4e-39
 Identities = 80/118 (67%), Positives = 94/118 (79%), Gaps = 4/118 (3%)
 Frame = +1

Query: 1   IYSPISFGKKYDPKGNYIRHFLPVLKDMPAEYIYAPWTAPLAVQTKANCIIGRDYPRPVV 180
           IYSP +FGKKYDP G+YIRHFLPVLKDMP EYIY PWTAP ++QTKANCIIG+DYP PVV
Sbjct: 418 IYSPTTFGKKYDPNGDYIRHFLPVLKDMPREYIYEPWTAPKSIQTKANCIIGKDYPMPVV 477

Query: 181 DHDIASKECKRKMGEAYALNRQSNGSVISGEHKKNSRKKSEE----EQNCKSQKQKLI 342
            HD ASKEC+RKMGEAYALN++ NG ++S +  KN R+K +E    E   K  KQ+LI
Sbjct: 478 SHDSASKECRRKMGEAYALNKELNG-LVSEDDLKNLRRKLDESEGQEAGAKRYKQQLI 534


>dbj|BAJ53248.1| JHL25H03.11 [Jatropha curcas]
          Length = 536

 Score =  166 bits (420), Expect = 4e-39
 Identities = 78/115 (67%), Positives = 91/115 (79%), Gaps = 3/115 (2%)
 Frame = +1

Query: 1   IYSPISFGKKYDPKGNYIRHFLPVLKDMPAEYIYAPWTAPLAVQTKANCIIGRDYPRPVV 180
           IYSPISFGKKYDP GNYIRHFLPVLKDMP E+IY PWTAPL+VQTKA CIIGRDYP+PVV
Sbjct: 421 IYSPISFGKKYDPNGNYIRHFLPVLKDMPKEFIYEPWTAPLSVQTKAKCIIGRDYPKPVV 480

Query: 181 DHDIASKECKRKMGEAYALNRQSNGSVIS---GEHKKNSRKKSEEEQNCKSQKQK 336
            HD ASKECKRK+ EAYALN++ NG +     G  K+  ++  ++E+    QKQK
Sbjct: 481 SHDSASKECKRKLAEAYALNQKLNGQLTEEDLGNLKRKLQQDQDQERKITRQKQK 535


>ref|XP_002517574.1| DNA photolyase, putative [Ricinus communis]
           gi|223543206|gb|EEF44738.1| DNA photolyase, putative
           [Ricinus communis]
          Length = 537

 Score =  164 bits (415), Expect = 2e-38
 Identities = 78/115 (67%), Positives = 95/115 (82%), Gaps = 2/115 (1%)
 Frame = +1

Query: 1   IYSPISFGKKYDPKGNYIRHFLPVLKDMPAEYIYAPWTAPLAVQTKANCIIGRDYPRPVV 180
           IYSPISFGKKYDP GNYI+HFLPVLKDMP EYIY PWTAPL+VQTKA CIIGRDYP+PVV
Sbjct: 422 IYSPISFGKKYDPNGNYIKHFLPVLKDMPKEYIYEPWTAPLSVQTKAKCIIGRDYPKPVV 481

Query: 181 DHDIASKECKRKMGEAYALNRQSNGSVISGEHKKNSRKKSEEEQN--CKSQKQKL 339
            HD ASKECK+K+ E+YALN++ NG  +  E  +N R+K E++Q+   K ++Q+L
Sbjct: 482 AHDSASKECKKKLAESYALNQKLNGK-LGEEDLRNLRRKLEQDQDQEHKGKRQRL 535


>ref|NP_566520.1| (6-4)DNA photolyase [Arabidopsis thaliana]
           gi|306756349|sp|O48652.2|UVR3_ARATH RecName:
           Full=(6-4)DNA photolyase; AltName: Full=Protein UV
           repair defective 3 gi|332642182|gb|AEE75703.1| (6-4)DNA
           photolyase [Arabidopsis thaliana]
          Length = 556

 Score =  163 bits (412), Expect = 4e-38
 Identities = 78/117 (66%), Positives = 94/117 (80%), Gaps = 4/117 (3%)
 Frame = +1

Query: 1   IYSPISFGKKYDPKGNYIRHFLPVLKDMPAEYIYAPWTAPLAVQTKANCIIGRDYPRPVV 180
           IYSPISFGKKYDP G YIRHFLPVLKDMP +YIY PWTAPL+VQTKANCI+G+DYP+P+V
Sbjct: 440 IYSPISFGKKYDPDGKYIRHFLPVLKDMPKQYIYEPWTAPLSVQTKANCIVGKDYPKPMV 499

Query: 181 DHDIASKECKRKMGEAYALNRQSNGSVISGEHKKNSRKK----SEEEQNCKSQKQKL 339
            HD ASKECKRKMGEAYALN++ +G V   E+ ++ R+K      EE   ++Q+ KL
Sbjct: 500 LHDSASKECKRKMGEAYALNKKMDGKV-DEENLRDLRRKLQKDEHEESKIRNQRPKL 555


>pdb|3FY4|A Chain A, (6-4) Photolyase Crystal Structure gi|228312125|pdb|3FY4|B
           Chain B, (6-4) Photolyase Crystal Structure
           gi|228312126|pdb|3FY4|C Chain C, (6-4) Photolyase
           Crystal Structure gi|2804280|dbj|BAA24449.1| 6-4
           photolyase [Arabidopsis thaliana]
           gi|3929918|dbj|BAA34711.1| 6-4 photolyase [Arabidopsis
           thaliana] gi|11994334|dbj|BAB02293.1| 6-4 photolyase
           [Arabidopsis thaliana]
          Length = 537

 Score =  163 bits (412), Expect = 4e-38
 Identities = 78/117 (66%), Positives = 94/117 (80%), Gaps = 4/117 (3%)
 Frame = +1

Query: 1   IYSPISFGKKYDPKGNYIRHFLPVLKDMPAEYIYAPWTAPLAVQTKANCIIGRDYPRPVV 180
           IYSPISFGKKYDP G YIRHFLPVLKDMP +YIY PWTAPL+VQTKANCI+G+DYP+P+V
Sbjct: 421 IYSPISFGKKYDPDGKYIRHFLPVLKDMPKQYIYEPWTAPLSVQTKANCIVGKDYPKPMV 480

Query: 181 DHDIASKECKRKMGEAYALNRQSNGSVISGEHKKNSRKK----SEEEQNCKSQKQKL 339
            HD ASKECKRKMGEAYALN++ +G V   E+ ++ R+K      EE   ++Q+ KL
Sbjct: 481 LHDSASKECKRKMGEAYALNKKMDGKV-DEENLRDLRRKLQKDEHEESKIRNQRPKL 536


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