BLASTX nr result

ID: Papaver23_contig00021241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00021241
         (1649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2...   456   e-126
ref|XP_002514778.1| pentatricopeptide repeat-containing protein,...   448   e-123
ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containi...   444   e-122
emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]   422   e-115
ref|XP_003542095.1| PREDICTED: pentatricopeptide repeat-containi...   419   e-114

>ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1|
            predicted protein [Populus trichocarpa]
          Length = 476

 Score =  456 bits (1174), Expect = e-126
 Identities = 222/428 (51%), Positives = 312/428 (72%)
 Frame = -1

Query: 1649 SSKDGSIEESLEKMNLDVNEEFGLKLIRTPNVNGHHLISFVRWAWKKNESFMTSRILDAL 1470
            SS DGS+E +L+  +LD++EEF +K++ TP+V G +LI F +WA KK +  +T+R +D L
Sbjct: 41   SSDDGSLESTLDTFSLDLHEEFVVKVLETPHVLGENLIRFFKWAMKKQDLSVTTRAIDVL 100

Query: 1469 VKAIGDGLKPIEKKEVYSLWDLIKEIGEKREVVLNTEILNGLIASLYMLGRGKAAKEVFD 1290
            V +I      + +K  Y+LWDL++EIGEK E +++   LN LIA L  LG+GKAA EVFD
Sbjct: 101  VSSICSS--ELRRKNAYALWDLVREIGEKNEGLVSVGSLNQLIALLSKLGKGKAALEVFD 158

Query: 1289 KFEEFGCDPDGNSYYFTVEALCNRKIFDGAWVVCDKMLNSGKLPDEMKIGKMIVSLCKGY 1110
            K ++FGC PD  +YY+T+EALC R  +D AW+VC+KML+ G LPD  KIGK+I   CKG 
Sbjct: 159  KSKDFGCVPDSETYYYTIEALCRRSFYDWAWIVCEKMLDQGPLPDSEKIGKIICWFCKGS 218

Query: 1109 RVKDAHMVYLMAKEKNKCLPMWSVNFLINGLCRKSETVKLARKVLQGLSGDSRKLATKCF 930
            + KDAH VYL+AKEK+KC P  ++ FLI  LCR   TV LA ++L    G+++K A K F
Sbjct: 219  KAKDAHKVYLLAKEKSKCPPKPALYFLIGSLCRDDGTVNLALEMLNDFEGEAKKYAIKPF 278

Query: 929  SFAVRALCQYKDIEGAKELLFEMIKEGPAPGHPVFNSVITALSKSGELEEALKLVKVMES 750
            S  +R LC+ KD++GAK+LL +MI EGP PG+ VFN+VI+   K G+++EA++++K+MES
Sbjct: 279  SSVIRGLCRIKDLDGAKQLLSKMIVEGPPPGNAVFNTVISGYCKGGDMKEAIEIMKLMES 338

Query: 749  RKLRPNIYTYTVIINGYVKGGQMDEALKILEQAKKTHRELTSDPYHILIRRYCQLEETDK 570
            R L+P++YTYTVII+GY  GGQM+EA  IL +AKK H +L+   YH LIR YC+L++ DK
Sbjct: 339  RGLKPDVYTYTVIISGYSNGGQMEEACYILSEAKKKHSKLSPVTYHALIRGYCKLDQFDK 398

Query: 569  ALSLLTEMKESGIVADENDYKDVIRSLCLNTLDWETAEKLLEEMKENGMCLSGNSQGLIK 390
            AL LL EM++ G+  + ++Y  +I+SLCL +LDW TAEKL  EMKE G+ L+  ++ LI 
Sbjct: 399  ALELLAEMEKFGVQPNADEYNKLIQSLCLKSLDWGTAEKLFAEMKEKGLYLNSITRSLIT 458

Query: 389  AVRELQKE 366
            AV+EL++E
Sbjct: 459  AVKELEQE 466


>ref|XP_002514778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545829|gb|EEF47332.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  448 bits (1152), Expect = e-123
 Identities = 226/431 (52%), Positives = 314/431 (72%)
 Frame = -1

Query: 1649 SSKDGSIEESLEKMNLDVNEEFGLKLIRTPNVNGHHLISFVRWAWKKNESFMTSRILDAL 1470
            SS D S+E SL+ M+L ++E+F +K++ TP + G +LI F  WA K+ +  +T+R++  L
Sbjct: 150  SSTDASLESSLDNMDLHLHEDFIVKVLETPLIVGDNLIKFFNWAIKQPDINVTTRLVHPL 209

Query: 1469 VKAIGDGLKPIEKKEVYSLWDLIKEIGEKREVVLNTEILNGLIASLYMLGRGKAAKEVFD 1290
            V+AI   L+   KK+ Y+LWDL+K+IGE+   VLN ++LN LIA    LG+GKAA EVF+
Sbjct: 210  VRAICSELR---KKDAYALWDLVKDIGEEENTVLNVDLLNQLIALFSKLGKGKAAFEVFN 266

Query: 1289 KFEEFGCDPDGNSYYFTVEALCNRKIFDGAWVVCDKMLNSGKLPDEMKIGKMIVSLCKGY 1110
            KF +FGC PD  +Y++T+EALC R IFD A  V +KML +  LPD  KIGK+I   CKG 
Sbjct: 267  KFGDFGCVPDSETYHYTIEALCRRSIFDWASSVREKMLRAEALPDTEKIGKIICWFCKGD 326

Query: 1109 RVKDAHMVYLMAKEKNKCLPMWSVNFLINGLCRKSETVKLARKVLQGLSGDSRKLATKCF 930
            +  DA++VYL+AKEKNK  P  SVNFLI  LC+K+ETVKLA ++L   SG  RK A K F
Sbjct: 327  KANDAYLVYLLAKEKNKYPPQPSVNFLIGLLCQKNETVKLALEMLDAFSGPKRKYAIKPF 386

Query: 929  SFAVRALCQYKDIEGAKELLFEMIKEGPAPGHPVFNSVITALSKSGELEEALKLVKVMES 750
            S  +RALC+ KD++GAK LL +M+ EGP PG+ VFNS+I   SK G+++EA+K+ ++M  
Sbjct: 387  SSVIRALCRIKDLDGAKMLLSKMVDEGPPPGNAVFNSIINGYSKCGDMKEAIKMKQLMVR 446

Query: 749  RKLRPNIYTYTVIINGYVKGGQMDEALKILEQAKKTHRELTSDPYHILIRRYCQLEETDK 570
            R L+P+++TY VI++GY  GGQM+EA K+L +AKK H +L+   YH +IR YC+LE+ DK
Sbjct: 447  RGLKPDLFTYAVIMSGYASGGQMEEACKVLSEAKKKHSKLSPVMYHTVIRGYCKLEQFDK 506

Query: 569  ALSLLTEMKESGIVADENDYKDVIRSLCLNTLDWETAEKLLEEMKENGMCLSGNSQGLIK 390
            AL LL EMK  G+ A+ ++Y  +I+SLCL  LDWE AEKLLE+MKE+G+ L+G ++GLI+
Sbjct: 507  ALDLLAEMKTFGVQANADEYNKLIQSLCLKALDWERAEKLLEKMKEDGLHLNGITRGLIR 566

Query: 389  AVRELQKEESE 357
            AV+EL+ E  E
Sbjct: 567  AVKELEDEGIE 577


>ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
            mitochondrial-like [Cucumis sativus]
            gi|449477884|ref|XP_004155152.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g02650,
            mitochondrial-like [Cucumis sativus]
          Length = 479

 Score =  444 bits (1143), Expect = e-122
 Identities = 225/439 (51%), Positives = 310/439 (70%), Gaps = 1/439 (0%)
 Frame = -1

Query: 1649 SSKDGSIEESLEKMNLDVNEEFGLKLIRTPNVNGHHLISFVRWAWKKNESFMTSR-ILDA 1473
            S+ DGS E SL++M L +NE+F LK+I TP++ G +LI F RWA   +  F  S  ++D 
Sbjct: 43   STVDGSFESSLDEMRLTLNEDFVLKVIETPHILGENLIRFFRWAVNSHPEFEVSTPVVDV 102

Query: 1472 LVKAIGDGLKPIEKKEVYSLWDLIKEIGEKREVVLNTEILNGLIASLYMLGRGKAAKEVF 1293
            LV+ +   L+   ++  YSLW+LIKEIG K+  +LN EILN LIA    LG+GKAA EV 
Sbjct: 103  LVRVVCANLR---QRVAYSLWELIKEIGGKQTSLLNAEILNQLIAFFSKLGKGKAALEVL 159

Query: 1292 DKFEEFGCDPDGNSYYFTVEALCNRKIFDGAWVVCDKMLNSGKLPDEMKIGKMIVSLCKG 1113
            + +E  GC P+  SYYFTVEALC R  +D AW VC+KML+SG +P+  ++GK+I   CKG
Sbjct: 160  NSYEVLGCVPNAESYYFTVEALCRRSSYDLAWPVCEKMLDSGSMPESNRVGKIISLFCKG 219

Query: 1112 YRVKDAHMVYLMAKEKNKCLPMWSVNFLINGLCRKSETVKLARKVLQGLSGDSRKLATKC 933
             + K+AH VYL+AKEK+  LP   +N LI+ LCR  ETVKLA ++L   S   R+ A K 
Sbjct: 220  NKAKNAHSVYLLAKEKHVNLPQCYMNILIHSLCRDDETVKLALEMLNDFSTGERRRAIKP 279

Query: 932  FSFAVRALCQYKDIEGAKELLFEMIKEGPAPGHPVFNSVITALSKSGELEEALKLVKVME 753
            +   +R+LC+ KD   AK LL +MI EGP PG+  FN+VI   SK+G+LEEA++L+K+ME
Sbjct: 280  YMEVIRSLCRIKDTSKAKTLLQKMIAEGPPPGNAAFNAVICGYSKAGDLEEAMELIKLME 339

Query: 752  SRKLRPNIYTYTVIINGYVKGGQMDEALKILEQAKKTHRELTSDPYHILIRRYCQLEETD 573
            SR L+P++Y+YT +I+GY KGGQM EA ++L++AKK H +L+   YH LIR +C+LEE D
Sbjct: 340  SRGLKPDVYSYTAVISGYAKGGQMKEAYEVLDEAKKKHAKLSHITYHTLIRNHCKLEEYD 399

Query: 572  KALSLLTEMKESGIVADENDYKDVIRSLCLNTLDWETAEKLLEEMKENGMCLSGNSQGLI 393
             AL LL+EMK  G+  + ++Y  +IRSLCL  +DW T+E+L EEMKENG+ L+G ++GLI
Sbjct: 400  SALKLLSEMKNFGVQPNVDEYNKLIRSLCLKAVDWRTSERLFEEMKENGLHLNGITRGLI 459

Query: 392  KAVRELQKEESEAPQESIA 336
            +AVREL++EE    + SIA
Sbjct: 460  RAVRELEEEELTTEELSIA 478


>emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]
          Length = 549

 Score =  422 bits (1084), Expect = e-115
 Identities = 214/431 (49%), Positives = 300/431 (69%)
 Frame = -1

Query: 1637 GSIEESLEKMNLDVNEEFGLKLIRTPNVNGHHLISFVRWAWKKNESFMTSRILDALVKAI 1458
            GS+E S   M L +NEEF ++++ TP V  ++LI F +W+WK     +T+R +DALV+A+
Sbjct: 135  GSLESSFNAMGLSLNEEFVVRVLETPFVPANNLIGFFKWSWKNPGFSVTTRAVDALVRAV 194

Query: 1457 GDGLKPIEKKEVYSLWDLIKEIGEKREVVLNTEILNGLIASLYMLGRGKAAKEVFDKFEE 1278
                + + +K+ YSLWDL+KEIGEK   VLN  ILN LIA    LG+GKA  EVF+ F E
Sbjct: 195  ---CQSVRRKDTYSLWDLVKEIGEKENGVLNVGILNELIAQFAKLGKGKAGLEVFNAFGE 251

Query: 1277 FGCDPDGNSYYFTVEALCNRKIFDGAWVVCDKMLNSGKLPDEMKIGKMIVSLCKGYRVKD 1098
            +G                 R IFD A  VC+KMLN+  LPD  K+  +I   CKG +VKD
Sbjct: 252  YG-----------------RSIFDWALSVCEKMLNASSLPDSEKVWNIISWFCKGRKVKD 294

Query: 1097 AHMVYLMAKEKNKCLPMWSVNFLINGLCRKSETVKLARKVLQGLSGDSRKLATKCFSFAV 918
            A++VYL+AKEKNK  P  +VNFLI  LCR+  T+ +A ++L   SG+  K A K ++  +
Sbjct: 295  AYLVYLLAKEKNKYPPKTTVNFLIASLCREDGTISMAVEMLDDFSGEECKYAIKPYTAVI 354

Query: 917  RALCQYKDIEGAKELLFEMIKEGPAPGHPVFNSVITALSKSGELEEALKLVKVMESRKLR 738
            R LC+ KD++GAK LL +MI+ GP PG+ VFN VI  LSK+GE+EEA+K++K+ME+R L+
Sbjct: 355  RGLCRSKDVDGAKRLLLKMIEAGPPPGNAVFNFVINGLSKAGEMEEAMKMMKLMETRGLK 414

Query: 737  PNIYTYTVIINGYVKGGQMDEALKILEQAKKTHRELTSDPYHILIRRYCQLEETDKALSL 558
            P++YTY+VI++GY  GG M+EA ++L +AK+ H +L+   YH LIR YC+LE+ DKA+ L
Sbjct: 415  PDVYTYSVIMSGYAHGGMMEEACRVLSEAKRNHSKLSPVTYHTLIRGYCKLEQFDKAVEL 474

Query: 557  LTEMKESGIVADENDYKDVIRSLCLNTLDWETAEKLLEEMKENGMCLSGNSQGLIKAVRE 378
            L EMKE G+  + ++Y  +I+SLCL  LDW+TAEKLLEEMK+NG+ L+G ++GLI+AV+E
Sbjct: 475  LGEMKEHGVQPNTDEYNKLIQSLCLKALDWQTAEKLLEEMKQNGLHLNGITRGLIRAVKE 534

Query: 377  LQKEESEAPQE 345
            L+ EE  A +E
Sbjct: 535  LE-EEGRATEE 544


>ref|XP_003542095.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
            mitochondrial-like [Glycine max]
          Length = 539

 Score =  419 bits (1076), Expect = e-114
 Identities = 219/440 (49%), Positives = 309/440 (70%), Gaps = 1/440 (0%)
 Frame = -1

Query: 1649 SSKDGSIEESLEKMNLDVNEEFGLKLIRTPNVNGHHLISFVRWAWKKNESFMTSRILDAL 1470
            +S DGS+E  L+ M+L ++++   K+  TP V   +LI F  WAW +    +T+ ++++L
Sbjct: 100  TSADGSLESCLDDMDLTLHQQLVTKITETPFVLSENLIRFFWWAWSERSLEVTTPMVESL 159

Query: 1469 VKAIGDGLKPIEKKEV-YSLWDLIKEIGEKREVVLNTEILNGLIASLYMLGRGKAAKEVF 1293
            V AI       +KKEV YSLWDL+KEIGEK   +LN  ILN LI+S   L +GKAA EVF
Sbjct: 160  VLAICGNDDVRKKKEVVYSLWDLVKEIGEKESGLLNVRILNELISSFSRLRKGKAALEVF 219

Query: 1292 DKFEEFGCDPDGNSYYFTVEALCNRKIFDGAWVVCDKMLNSGKLPDEMKIGKMIVSLCKG 1113
            DKFE F C PD ++YYFT+EALC R+ FD A  VC KM+++  LPD  K+G ++  LCKG
Sbjct: 220  DKFEAFHCVPDADTYYFTIEALCRRRAFDWACGVCQKMVDARTLPDAEKVGAILSWLCKG 279

Query: 1112 YRVKDAHMVYLMAKEKNKCLPMWSVNFLINGLCRKSETVKLARKVLQGLSGDSRKLATKC 933
             + K+AH VY++A EK K  P+  V+FL+  LC + ETVK A ++L+ +  + R+ A K 
Sbjct: 280  KKAKEAHGVYVVATEKGKLPPVNVVSFLVLKLCGEDETVKSALEILEDIPEEKRERAIKP 339

Query: 932  FSFAVRALCQYKDIEGAKELLFEMIKEGPAPGHPVFNSVITALSKSGELEEALKLVKVME 753
            F   VRALC+ K+++ AKELL +MI+ GP PG+ VFN V+TA SK+GE+ +A++++++ME
Sbjct: 340  FLAVVRALCRIKEVDKAKELLLKMIENGPPPGNAVFNFVVTAYSKAGEMGKAVEMMRLME 399

Query: 752  SRKLRPNIYTYTVIINGYVKGGQMDEALKILEQAKKTHRELTSDPYHILIRRYCQLEETD 573
            SR LRP++YTYTV+ + Y  GG+M+EA KIL +AKK H +L    +H LIR YC+LE+ D
Sbjct: 400  SRGLRPDVYTYTVLASAYSNGGEMEEAQKILAEAKKKHVKLGPVMFHTLIRGYCKLEQFD 459

Query: 572  KALSLLTEMKESGIVADENDYKDVIRSLCLNTLDWETAEKLLEEMKENGMCLSGNSQGLI 393
            +AL LL EMK+ G+    ++Y  +I+SLCL  LDW+ AEKL EEMKE+G+ L G ++GLI
Sbjct: 460  EALKLLAEMKDYGVRPSVDEYDKLIQSLCLKALDWKMAEKLQEEMKESGLHLKGITRGLI 519

Query: 392  KAVRELQKEESEAPQESIAA 333
            +AV+E++KE  EA  ESI A
Sbjct: 520  RAVKEMEKEVVEA--ESITA 537


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