BLASTX nr result

ID: Papaver23_contig00021065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00021065
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327905.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-12
gb|AAB35284.1| arabinogalactan-protein [Nicotiana alata]               69   5e-10
ref|XP_002275180.1| PREDICTED: protein E6-like [Vitis vinifera]        65   7e-09
gb|AAY43792.1| E6-3 [Gossypium hirsutum]                               58   7e-07
gb|AAB03081.1| E6 [Gossypium barbadense] gi|1000090|gb|AAB03085....    58   9e-07

>ref|XP_002327905.1| predicted protein [Populus trichocarpa] gi|222837314|gb|EEE75693.1|
           predicted protein [Populus trichocarpa]
          Length = 373

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 53/142 (37%), Positives = 69/142 (48%)
 Frame = +3

Query: 39  QEQNEGSHYGVADKIANNNVYEGKQFGLSDAQFSTNDVNNNQNYEQQIEKQGMSDTRFPE 218
           + +N+ S  G      NN       +  ++  ++TN   NN  YE   E+QGMSDTRF E
Sbjct: 212 ETENQNSENGYTKNYNNNGNTNNNNY--NNNGYTTN--YNNNGYET--ERQGMSDTRFME 265

Query: 219 NGQRYDGAAVXXXXXXXXXXXHPIERQGMSDTRFQELGRYYKAASSNDNINNNMYQQGEK 398
            G+ Y                   ERQGMSDTR  E G+YY       N+ N      E+
Sbjct: 266 GGKYY-------------YHVKNTERQGMSDTRSMEGGKYYS------NVKNT-----ER 301

Query: 399 QGMSDTRFLANGKYYYHVEAAN 464
           QGMSDTRF+  GKYY +V+  N
Sbjct: 302 QGMSDTRFMEGGKYYSNVKNEN 323



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 37/103 (35%), Positives = 49/103 (47%)
 Frame = +3

Query: 87  NNNVYEGKQFGLSDAQFSTNDVNNNQNYEQQIEKQGMSDTRFPENGQRYDGAAVXXXXXX 266
           NNN YE ++ G+SD +F          + +  E+QGMSDTR  E G+ Y           
Sbjct: 247 NNNGYETERQGMSDTRFMEG--GKYYYHVKNTERQGMSDTRSMEGGKYYSNVK------- 297

Query: 267 XXXXXHPIERQGMSDTRFQELGRYYKAASSNDNINNNMYQQGE 395
                   ERQGMSDTRF E G+YY    + +    N Y  G+
Sbjct: 298 ------NTERQGMSDTRFMEGGKYYSNVKNENYYPANEYVSGK 334



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 11/159 (6%)
 Frame = +3

Query: 12  SEFVDHSAVQEQNEGSHYGVADKIANNNVYEGKQFGLSDAQFSTNDVNNN---QNYEQQI 182
           +E +D     ++ E S+Y      +N   Y    + +  A++ T++ NNN    NY    
Sbjct: 121 NEELDGVPFDKKYENSNYNNNGYTSN---YNNNGYKVGSARYETSNQNNNGYTSNYNNNG 177

Query: 183 EKQGMSDTRFPENGQRYDGAAVXXXXXXXXXXXHPIERQGMSDTRFQELGRYYKAASSND 362
            K G +  R+    Q  +G                 E +  +              ++N+
Sbjct: 178 YKVGSA--RYETGNQNNNGYTNNYYNNGYKLAGESYETENQNSENGYTKNYNNNGNTNNN 235

Query: 363 NINNNMYQ--------QGEKQGMSDTRFLANGKYYYHVE 455
           N NNN Y         + E+QGMSDTRF+  GKYYYHV+
Sbjct: 236 NYNNNGYTTNYNNNGYETERQGMSDTRFMEGGKYYYHVK 274


>gb|AAB35284.1| arabinogalactan-protein [Nicotiana alata]
          Length = 461

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 45/134 (33%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
 Frame = +3

Query: 87  NNNVYEGKQFGLSDAQFSTNDVNNNQNYEQQIEKQGMSDTRFPENGQRYDGAAVXXXXXX 266
           NNNV+       ++    + + NNN N     E    ++  + EN   Y+ A+       
Sbjct: 310 NNNVFSENYNNNNNNNVFSENYNNNNNNNAFYENYNNNNNGYSEN---YNQAS------S 360

Query: 267 XXXXXHPIERQGMSDTRFQELGRYYKAASSNDNINNNMYQQG--------------EKQG 404
                + +ERQG+SDTRF E G+YY     N+N NNN Y +               E+QG
Sbjct: 361 YNNNDNTVERQGLSDTRFLENGKYYYDIK-NENTNNNGYSENYNHVSSYNNNNNMVERQG 419

Query: 405 MSDTRFLANGKYYY 446
           +SDTRFL NG Y+Y
Sbjct: 420 LSDTRFLDNGNYFY 433



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 3/147 (2%)
 Frame = +3

Query: 66  GVADKIANNNV---YEGKQFGLSDAQFSTNDVNNNQNYEQQIEKQGMSDTRFPENGQRYD 236
           G + KI NN     Y     G S++  + N+ NNN N   +      ++  F EN    +
Sbjct: 276 GYSKKINNNGYSQNYMNNNNGFSESYNNNNNNNNNNNVFSENYNNNNNNNVFSENYNNNN 335

Query: 237 GAAVXXXXXXXXXXXHPIERQGMSDTRFQELGRYYKAASSNDNINNNMYQQGEKQGMSDT 416
                             E    ++  + E    Y  ASS +N +N +    E+QG+SDT
Sbjct: 336 NNNAFY------------ENYNNNNNGYSE---NYNQASSYNNNDNTV----ERQGLSDT 376

Query: 417 RFLANGKYYYHVEAANPKVNKHNDEYS 497
           RFL NGKYYY ++  N   N +++ Y+
Sbjct: 377 RFLENGKYYYDIKNENTNNNGYSENYN 403


>ref|XP_002275180.1| PREDICTED: protein E6-like [Vitis vinifera]
          Length = 282

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 51/185 (27%), Positives = 76/185 (41%), Gaps = 43/185 (23%)
 Frame = +3

Query: 66  GVADKIANNNVYEGKQ-FGLSDAQFSTNDVNNNQNYEQQIEKQG---MSDTRFPENGQRY 233
           G A ++  ++  +G   +G    +FS   V+ N+   +++  +    +++T +  N  RY
Sbjct: 64  GPASELFQSDTLDGYGLYGRGSNEFSPATVSENEVVPEELTDESYKELAETSYSNNNNRY 123

Query: 234 DGAAVXXXXXXXXXXXHPIERQGMSDTRFQELGRY-YKAASSNDNINNNMYQQG------ 392
                           H  E+QGMSDTRF E G+Y YK  + + N N N Y         
Sbjct: 124 S-------TEYYKNNGHTTEQQGMSDTRFLENGKYSYKPDTYSPNSNKNGYSSSYRNNGY 176

Query: 393 --------------------------------EKQGMSDTRFLANGKYYYHVEAANPKVN 476
                                           EKQGMSDTRFL NGKYY+ +   N  V+
Sbjct: 177 STSSSHNNGYSTSSSHNNGYSTSSSYNNGYSTEKQGMSDTRFLENGKYYHDLNNENHYVD 236

Query: 477 KHNDE 491
            +N E
Sbjct: 237 GYNTE 241


>gb|AAY43792.1| E6-3 [Gossypium hirsutum]
          Length = 246

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = +3

Query: 291 ERQGMSDTRFQELGRYYKAASSNDNIN-NNMYQQGEKQGMSDTRFLANGKYYYHVEAAN 464
           ++Q + +  F E G   K   +N+  N NN Y  GEKQGMSDTR+L NGKYYY V++ N
Sbjct: 142 KQQNLGEAIFTEKGWSTKGNQNNNYYNGNNGYNNGEKQGMSDTRYLENGKYYYDVKSEN 200


>gb|AAB03081.1| E6 [Gossypium barbadense] gi|1000090|gb|AAB03085.1| E6 [Gossypium
           barbadense] gi|209361539|gb|ACI43386.1| E6-2 protein
           kinase [Gossypium hirsutum]
          Length = 246

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = +3

Query: 291 ERQGMSDTRFQELGRYYKAASSNDNIN-NNMYQQGEKQGMSDTRFLANGKYYYHVEAAN 464
           ++Q + +  F E G   K   +N+  N NN Y  GEKQGMSDTR+L NGKYYY V++ N
Sbjct: 142 KQQNLGEAIFTEKGWSTKENQNNNYYNGNNGYNNGEKQGMSDTRYLENGKYYYDVKSEN 200


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