BLASTX nr result

ID: Papaver23_contig00021053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00021053
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA72990.1| unnamed protein product [Brassica oleracea var. ...   123   2e-26
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...   121   6e-26
gb|AAF79259.1|AC023279_8 F12K21.14 [Arabidopsis thaliana]             119   3e-25
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]   119   4e-25
emb|CAN65555.1| hypothetical protein VITISV_009833 [Vitis vinifera]   119   4e-25

>emb|CAA72990.1| unnamed protein product [Brassica oleracea var. acephala]
          Length = 253

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/115 (51%), Positives = 82/115 (71%)
 Frame = +3

Query: 3   SWSSKKQPTISKSSAEAEYKFLSVASAELKWLVDLLSELHVQVSTPSLLFCDNTSAMFLS 182
           SW SKKQPT+S+SSAEAEY+ L++AS E+ WL  LL ELHV  S+  +LF D+T+A++++
Sbjct: 126 SWRSKKQPTVSRSSAEAEYRALALASCEMMWLCILLRELHVASSSVPVLFSDSTAAIYIA 185

Query: 183 SNHVFHAETKHIEMQYHTIRELVENVFLKLQHISSQDQLDDIFTKGLCHPNFSRL 347
           +N VFH  TKHIE+  HT+RE ++   LK  H+ ++DQ+ DI TK L    F  L
Sbjct: 186 TNPVFHERTKHIELDCHTVREKIDKGLLKTLHVRTEDQVADILTKPLFPYQFEHL 240


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
            (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score =  121 bits (304), Expect = 6e-26
 Identities = 59/115 (51%), Positives = 81/115 (70%)
 Frame = +3

Query: 6    WSSKKQPTISKSSAEAEYKFLSVASAELKWLVDLLSELHVQVSTPSLLFCDNTSAMFLSS 185
            W S+KQ  +SKSSAEAEY+ LSVA+ EL WL + L EL V +S P+LLFCDN +A+ +++
Sbjct: 1189 WKSRKQDVVSKSSAEAEYRSLSVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHIAN 1248

Query: 186  NHVFHAETKHIEMQYHTIRELVENVFLKLQHISSQDQLDDIFTKGLCHPNFSRLL 350
            NHVFH  TKHIE   H++RE +     +L HI+++ Q+ D FTK L   +F RL+
Sbjct: 1249 NHVFHERTKHIESDCHSVRERLLKGLFELYHINTELQIADPFTKPLYPSHFHRLI 1303


>gb|AAF79259.1|AC023279_8 F12K21.14 [Arabidopsis thaliana]
          Length = 427

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/116 (50%), Positives = 83/116 (71%)
 Frame = +3

Query: 3   SWSSKKQPTISKSSAEAEYKFLSVASAELKWLVDLLSELHVQVSTPSLLFCDNTSAMFLS 182
           SW SKKQPT+S+SSAEAEY+ L++AS E+ WL  LL  L V  S P +L+ D+T+A++++
Sbjct: 301 SWRSKKQPTVSRSSAEAEYRALALASCEMAWLFTLLIALRVATSVP-ILYSDSTAAVYIA 359

Query: 183 SNHVFHAETKHIEMQYHTIRELVENVFLKLQHISSQDQLDDIFTKGLCHPNFSRLL 350
            N VFH  TKHIE+  HT+R+ ++N  LKL H+ ++DQ+ DI TK L    F+ LL
Sbjct: 360 INPVFHERTKHIEIDCHTVRDKLDNGQLKLLHVKTEDQVADILTKPLFPHQFTHLL 415


>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score =  119 bits (297), Expect = 4e-25
 Identities = 56/112 (50%), Positives = 78/112 (69%)
 Frame = +3

Query: 3    SWSSKKQPTISKSSAEAEYKFLSVASAELKWLVDLLSELHVQVSTPSLLFCDNTSAMFLS 182
            SWSSKKQ T+S+SSAEAEY+ L+VA+A++ W++ LL +LHV +S P  + CDN SA+F++
Sbjct: 1222 SWSSKKQSTVSRSSAEAEYRSLAVATADIAWIIQLLRDLHVTLSVPPKILCDNQSAIFMA 1281

Query: 183  SNHVFHAETKHIEMQYHTIRELVENVFLKLQHISSQDQLDDIFTKGLCHPNF 338
             N V    +KHI + YH +RELV+   LK+  + S  QL D  TKG+  P F
Sbjct: 1282 VNPVTRPRSKHIAIDYHFVRELVDKGTLKIDFVPSHLQLADSLTKGVTKPQF 1333


>emb|CAN65555.1| hypothetical protein VITISV_009833 [Vitis vinifera]
          Length = 325

 Score =  119 bits (297), Expect = 4e-25
 Identities = 56/112 (50%), Positives = 78/112 (69%)
 Frame = +3

Query: 3   SWSSKKQPTISKSSAEAEYKFLSVASAELKWLVDLLSELHVQVSTPSLLFCDNTSAMFLS 182
           SWSSKKQ T+S+SSAEAEY+ L+VA+A++ W++ LL +LHV +S P  + CDN SA+F++
Sbjct: 186 SWSSKKQSTVSRSSAEAEYRSLAVAAADIAWIIQLLRDLHVTLSVPPKILCDNQSAIFMA 245

Query: 183 SNHVFHAETKHIEMQYHTIRELVENVFLKLQHISSQDQLDDIFTKGLCHPNF 338
            N V    +KHI + YH +RELV+   LK+  + S  QL D  TKG+  P F
Sbjct: 246 VNPVTRPRSKHIAIDYHFVRELVDKGTLKIDFVPSHLQLADSLTKGVTKPQF 297


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