BLASTX nr result

ID: Papaver23_contig00020949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00020949
         (1139 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBA12000.1| putative auxin response factor 3 [Illicium parvi...   208   2e-51
emb|CAX63126.1| ETTIN protein [Amborella trichopoda]                  183   6e-44
emb|CAX63117.1| ETTIN protein [Amborella trichopoda]                  183   6e-44
emb|CAX63133.1| ARF-L1 protein [Ginkgo biloba]                        154   5e-35
ref|XP_002866381.1| hypothetical protein ARALYDRAFT_496192 [Arab...   149   1e-33

>emb|CBA12000.1| putative auxin response factor 3 [Illicium parviflorum]
          Length = 837

 Score =  208 bits (530), Expect = 2e-51
 Identities = 139/342 (40%), Positives = 190/342 (55%), Gaps = 36/342 (10%)
 Frame = +3

Query: 3    GESARFPKVLQGQELYS-KAPQMRGLVDNRSRDSGEFGYLDGVHRSTNGSAWPVMLRGYS 179
            GES +F KVLQGQE++  K P  R  VD R  ++  FG  +G H S  GS WP+ ++GY+
Sbjct: 478  GESDQFQKVLQGQEIFPLKQPYGRPQVDIRVHENSGFGLFEGFHMS--GSRWPLPVQGYA 535

Query: 180  -DAQTXXXXXXXXXXXXXLMFQQASTRTANPGRAHAFN---NNHEKEDLASMF------- 326
               Q+             L FQ+ +   + P  A+  N   N  E+  L+  F       
Sbjct: 536  TQVQSFKQSPEVSSPSSVLRFQRGTNNVSYPYFAYGINHLPNVEEQGRLSGFFDRSKLSS 595

Query: 327  APELWKEHQL-----------MDFMHPPGS-----FVNRAGMMGERGLATSNKNGCRLFG 458
             P++     +           +D  + PG+      ++++    +R    +    CRLFG
Sbjct: 596  GPQISSLSSIDCREDRRCMYPLDQTNRPGNSFDPTLISKSDFK-DRQSGEALGTSCRLFG 654

Query: 459  FPLTEETQVANEEDLSTTPITSPSSNENLNPDISYVACTENYLDPTR--------SAKAF 614
            FPLT+E  VAN  D   TP+ S S+ +    D+     T N + P +        S K  
Sbjct: 655  FPLTKEAPVANTVD--PTPVASQSAKDL---DLKTCLPTANSMIPGKQLHAEVQSSTKTA 709

Query: 615  GQRCTKMLQVHKQGSVAGRAIDLTKLEGYPDLISELERLFNMEGLLNDPEKGWQVVYTDQ 794
            G+ CTK   VH+QG++ GRAIDL+KL+GY DLI+ELERLFNMEGLLNDP KGWQVVYTD 
Sbjct: 710  GRSCTK---VHRQGNLVGRAIDLSKLDGYDDLITELERLFNMEGLLNDPGKGWQVVYTDD 766

Query: 795  EDEMMLIGDGPWKEFCNIVSKILIYTRNQEVVEMDNNGNSSE 920
            ED+MML+GD PW+EFCNIVSKILIYT ++  VE+   G +S+
Sbjct: 767  EDDMMLVGDDPWQEFCNIVSKILIYTHDE--VELMVPGGTSD 806


>emb|CAX63126.1| ETTIN protein [Amborella trichopoda]
          Length = 478

 Score =  183 bits (465), Expect = 6e-44
 Identities = 129/323 (39%), Positives = 164/323 (50%), Gaps = 31/323 (9%)
 Frame = +3

Query: 6    ESARFPKVLQGQELYSKAPQMRGLVDNRSRDSG-EFGYLDGVHRSTNGSAWPVM-LRGYS 179
            ES RF KVLQGQE++    Q     +NR R+S    G L+G      G  W V+ L+G+ 
Sbjct: 112  ESDRFHKVLQGQEIFHLKSQ-----NNRERNSELSVGTLEGYPIPITGERWSVLPLQGHP 166

Query: 180  DAQTXXXXXXXXXXXXXLMFQQASTRTANPGRAHAFNNNH-------------------E 302
                             L F  + +   +P       NN                     
Sbjct: 167  AQFPLSPSTPRFPTPSLLRFHGSGSHLLHPPLVPQDINNTLRIAEQPSGNFSLLACGEVS 226

Query: 303  KEDLASMFAPELWKEHQLMDFMHPPGSFVNRAGMMGERGLATSNKNGCRLFGFPLTEETQ 482
            K  L       L K+ Q  D   PP          G+ G   +  + CRLFGF LTEE  
Sbjct: 227  KGPLNESPCDSLKKKSQAPDVCAPPTDAFRVDIKDGKDGATNARNSCCRLFGFSLTEEPP 286

Query: 483  VANEEDLSTTPITSPSSNENLNPDISY------VAC-TENYLDPTRSA---KAFGQRCTK 632
            ++NE         S SSN++ N   S+      V+C T+     ++S    K   + CTK
Sbjct: 287  LSNEA--MDPAHVSLSSNDDFNSKSSFQPSTWTVSCETQQKQSESKSQCLNKTANRSCTK 344

Query: 633  MLQVHKQGSVAGRAIDLTKLEGYPDLISELERLFNMEGLLNDPEKGWQVVYTDQEDEMML 812
               VHKQGS+ GRAI+L+K EGY DLISELERLFNMEGLLNDP+KGWQVVYTD +D+MML
Sbjct: 345  ---VHKQGSMVGRAINLSKFEGYDDLISELERLFNMEGLLNDPKKGWQVVYTDSDDDMML 401

Query: 813  IGDGPWKEFCNIVSKILIYTRNQ 881
            +GD PW+EFCNIVSKILIYT ++
Sbjct: 402  VGDDPWQEFCNIVSKILIYTHDE 424


>emb|CAX63117.1| ETTIN protein [Amborella trichopoda]
          Length = 840

 Score =  183 bits (465), Expect = 6e-44
 Identities = 129/323 (39%), Positives = 164/323 (50%), Gaps = 31/323 (9%)
 Frame = +3

Query: 6    ESARFPKVLQGQELYSKAPQMRGLVDNRSRDSG-EFGYLDGVHRSTNGSAWPVM-LRGYS 179
            ES RF KVLQGQE++    Q     +NR R+S    G L+G      G  W V+ L+G+ 
Sbjct: 474  ESDRFHKVLQGQEIFHLKSQ-----NNRERNSELSVGTLEGYPIPITGERWSVLPLQGHP 528

Query: 180  DAQTXXXXXXXXXXXXXLMFQQASTRTANPGRAHAFNNNH-------------------E 302
                             L F  + +   +P       NN                     
Sbjct: 529  AQFPLSPSTPRFPTPSLLRFHGSGSHLLHPPLVPQDINNTLRIAEQPSGNFSLLACGEVS 588

Query: 303  KEDLASMFAPELWKEHQLMDFMHPPGSFVNRAGMMGERGLATSNKNGCRLFGFPLTEETQ 482
            K  L       L K+ Q  D   PP          G+ G   +  + CRLFGF LTEE  
Sbjct: 589  KGPLNESPCDSLKKKSQAPDVCAPPTDAFRVDIKDGKDGATNARNSCCRLFGFSLTEEPP 648

Query: 483  VANEEDLSTTPITSPSSNENLNPDISY------VAC-TENYLDPTRSA---KAFGQRCTK 632
            ++NE         S SSN++ N   S+      V+C T+     ++S    K   + CTK
Sbjct: 649  LSNEA--MDPAHVSLSSNDDFNSKSSFQPSTWTVSCETQQKQSESKSQCLNKTANRSCTK 706

Query: 633  MLQVHKQGSVAGRAIDLTKLEGYPDLISELERLFNMEGLLNDPEKGWQVVYTDQEDEMML 812
               VHKQGS+ GRAI+L+K EGY DLISELERLFNMEGLLNDP+KGWQVVYTD +D+MML
Sbjct: 707  ---VHKQGSMVGRAINLSKFEGYDDLISELERLFNMEGLLNDPKKGWQVVYTDSDDDMML 763

Query: 813  IGDGPWKEFCNIVSKILIYTRNQ 881
            +GD PW+EFCNIVSKILIYT ++
Sbjct: 764  VGDDPWQEFCNIVSKILIYTHDE 786


>emb|CAX63133.1| ARF-L1 protein [Ginkgo biloba]
          Length = 958

 Score =  154 bits (388), Expect = 5e-35
 Identities = 93/215 (43%), Positives = 126/215 (58%), Gaps = 30/215 (13%)
 Frame = +3

Query: 342  KEHQLMDFMHPPGSFVNRAGMMGERGLATSNKNGCRLFGFPLTEETQVANEEDLSTTPIT 521
            K+HQL      P +  ++ G  G        K+ C+LFGF L EE+   ++   S  P  
Sbjct: 719  KQHQLSS--QTPATDADQGGDQG--------KHSCKLFGFSLIEESACIDDAISSRIPRA 768

Query: 522  SPSSN-----------------------ENLNPDISYVACTENYLD-------PTRSAKA 611
              + N                       ++L+     +  +E+ +        PT S  A
Sbjct: 769  GVTMNFLHMAHDQEPVQSSILRNLDQPLKDLHDHSEGLESSEHQITFQTISKVPT-SVPA 827

Query: 612  FGQRCTKMLQVHKQGSVAGRAIDLTKLEGYPDLISELERLFNMEGLLNDPEKGWQVVYTD 791
             G++CTK   VHKQG++ GRA+DL+KL+GY +LISELERLFNMEGLLNDPEKGWQVVYTD
Sbjct: 828  LGRKCTK---VHKQGNIVGRAVDLSKLDGYDELISELERLFNMEGLLNDPEKGWQVVYTD 884

Query: 792  QEDEMMLIGDGPWKEFCNIVSKILIYTRNQEVVEM 896
             E+++ML+GD PW+EFCNIV KILIYT ++EV +M
Sbjct: 885  NENDIMLVGDDPWQEFCNIVCKILIYT-HEEVEKM 918


>ref|XP_002866381.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
            lyrata] gi|297312216|gb|EFH42640.1| hypothetical protein
            ARALYDRAFT_496192 [Arabidopsis lyrata subsp. lyrata]
          Length = 791

 Score =  149 bits (376), Expect = 1e-33
 Identities = 106/307 (34%), Positives = 147/307 (47%), Gaps = 6/307 (1%)
 Frame = +3

Query: 15   RFPKVLQGQELYS--KAPQMRGLVDNRSRDSGEFGYLDG-VHRSTNGSAWPVMLRGYSDA 185
            RFP+VLQGQE+ S    PQ  G     +      GY D   +++   S +P+ L+G    
Sbjct: 517  RFPRVLQGQEICSLKSFPQFAGFSPAVASGKPNLGYTDPFAYQANKSSFYPLALQGIRST 576

Query: 186  QTXXXXXXXXXXXXXLMFQQASTRTANPGRAHAFNNNHEKEDLASMFAPELWKEHQLMDF 365
                             +   +  + +P RA  F     K D  +               
Sbjct: 577  HVPYQNP----------YNAGNQSSGHPSRAINFGEETRKFDAQNGGGLP---------- 616

Query: 366  MHPPGSFVNRAGMMGERGLATSNKN---GCRLFGFPLTEETQVANEEDLSTTPITSPSSN 536
             +       +  MMG++  +  + N   GC+LFGF L               P+ +P+SN
Sbjct: 617  NNVTADLPFKIDMMGKQKGSDFDMNASSGCKLFGFSL---------------PVETPASN 661

Query: 537  ENLNPDISYVACTENYLDPTRSAKAFGQRCTKMLQVHKQGSVAGRAIDLTKLEGYPDLIS 716
                              P  S+K     CTK   VHKQGS  GRAIDL++L GY DL++
Sbjct: 662  ------------------PQSSSKRI---CTK---VHKQGSQVGRAIDLSRLNGYDDLLT 697

Query: 717  ELERLFNMEGLLNDPEKGWQVVYTDQEDEMMLIGDGPWKEFCNIVSKILIYTRNQEVVEM 896
            ELERLFNMEGLL DPEKGW+++YTD E++MM++GD PW +FCN+V KI +YT+  E VE 
Sbjct: 698  ELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTK--EEVEN 755

Query: 897  DNNGNSS 917
             N+ N S
Sbjct: 756  ANDDNKS 762


Top