BLASTX nr result

ID: Papaver23_contig00020879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00020879
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282447.2| PREDICTED: E3 ubiquitin-protein ligase MARCH...    60   3e-07
emb|CBI32382.3| unnamed protein product [Vitis vinifera]               60   3e-07
emb|CAN65907.1| hypothetical protein VITISV_004874 [Vitis vinifera]    60   3e-07
ref|XP_002518730.1| ssm4 protein, putative [Ricinus communis] gi...    59   3e-07
ref|XP_003528520.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...    56   3e-06

>ref|XP_002282447.2| PREDICTED: E3 ubiquitin-protein ligase MARCH6 [Vitis vinifera]
          Length = 1195

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 33/63 (52%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +2

Query: 2    RDDRYLIGRRLHNFGEDKILKRNEAE-IVSETAEXXXXXXXXXXXXXEADVGLRLRHPNQ 178
            RDDRYLIGRRLHN+GED   K+NE E I SET               EAD+G+RLR  N+
Sbjct: 1133 RDDRYLIGRRLHNYGEDTEGKQNEVEDIPSETQSANLHGTALIRHDREADIGMRLRRANR 1192

Query: 179  MQA 187
              A
Sbjct: 1193 HDA 1195


>emb|CBI32382.3| unnamed protein product [Vitis vinifera]
          Length = 1110

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 33/63 (52%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +2

Query: 2    RDDRYLIGRRLHNFGEDKILKRNEAE-IVSETAEXXXXXXXXXXXXXEADVGLRLRHPNQ 178
            RDDRYLIGRRLHN+GED   K+NE E I SET               EAD+G+RLR  N+
Sbjct: 1048 RDDRYLIGRRLHNYGEDTEGKQNEVEDIPSETQSANLHGTALIRHDREADIGMRLRRANR 1107

Query: 179  MQA 187
              A
Sbjct: 1108 HDA 1110


>emb|CAN65907.1| hypothetical protein VITISV_004874 [Vitis vinifera]
          Length = 1177

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 33/63 (52%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +2

Query: 2    RDDRYLIGRRLHNFGEDKILKRNEAE-IVSETAEXXXXXXXXXXXXXEADVGLRLRHPNQ 178
            RDDRYLIGRRLHN+GED   K+NE E I SET               EAD+G+RLR  N+
Sbjct: 1115 RDDRYLIGRRLHNYGEDTEGKQNEVEDIPSETQSANLHGTALIRHDREADIGMRLRRANR 1174

Query: 179  MQA 187
              A
Sbjct: 1175 HDA 1177


>ref|XP_002518730.1| ssm4 protein, putative [Ricinus communis]
           gi|223542111|gb|EEF43655.1| ssm4 protein, putative
           [Ricinus communis]
          Length = 214

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/62 (51%), Positives = 35/62 (56%)
 Frame = +2

Query: 2   RDDRYLIGRRLHNFGEDKILKRNEAEIVSETAEXXXXXXXXXXXXXEADVGLRLRHPNQM 181
           RDDRYLIGRRLHNFGEDK  + NEA   SE                E +VGLRLR   Q 
Sbjct: 152 RDDRYLIGRRLHNFGEDKEERENEAGTSSEVQNSNLQGADLIRNDGEVEVGLRLRRVYQQ 211

Query: 182 QA 187
           +A
Sbjct: 212 EA 213


>ref|XP_003528520.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Glycine max]
          Length = 1124

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/59 (55%), Positives = 34/59 (57%)
 Frame = +2

Query: 2    RDDRYLIGRRLHNFGEDKILKRNEAEIVSETAEXXXXXXXXXXXXXEADVGLRLRHPNQ 178
            RDDRYLIGRRLHNFGE    K N AE  +   E             EADVGLRLRH NQ
Sbjct: 1064 RDDRYLIGRRLHNFGE-HAEKANVAETSTGEQEAILLGTGLNQQDHEADVGLRLRHVNQ 1121


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