BLASTX nr result

ID: Papaver23_contig00020865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00020865
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633914.1| PREDICTED: spastin-like [Vitis vinifera] gi|...   135   3e-30
ref|XP_002511743.1| Spastin, putative [Ricinus communis] gi|2235...   125   5e-27
gb|AAL25088.1|AF426837_1 Tobacco mosaic virus helicase domain-bi...   124   6e-27
ref|XP_003623772.1| Spastin [Medicago truncatula] gi|355498787|g...   121   5e-26
ref|XP_003623748.1| Spastin [Medicago truncatula] gi|355498763|g...   121   5e-26

>ref|XP_003633914.1| PREDICTED: spastin-like [Vitis vinifera]
           gi|296089089|emb|CBI38792.3| unnamed protein product
           [Vitis vinifera]
          Length = 491

 Score =  135 bits (341), Expect = 3e-30
 Identities = 72/143 (50%), Positives = 100/143 (69%), Gaps = 1/143 (0%)
 Frame = -1

Query: 427 KVKTYYQRISKWQGQISESLQVLSRLTASSTPSTSKTFVSRPKATVASSSPISGTRRNAT 248
           KVK+Y Q+ISKWQGQ++E L++L R  A  T +   T      AT +S+   S  R +  
Sbjct: 109 KVKSYRQKISKWQGQVAERLEILIR-RAGGTSTNKNTLADTKPATTSSTK--SNARTDVL 165

Query: 247 RAPLVSGRYNVAVRNQTDSAIGSKPARQSGN-YDSKLVEMIESAIVNKSPSVKWEDVAGL 71
           +   ++ R +  +R+Q+D  + SKP ++SG+ YD+KLVEMI + IV++SPSVKW+DVAGL
Sbjct: 166 QKSPLTNRRSPIMRSQSDKVVSSKPVQESGHGYDAKLVEMINTVIVDRSPSVKWDDVAGL 225

Query: 70  EKAKQSLLEMVIIPTHRPDLFPG 2
           EKAKQ+LLEMVI+PT R DLF G
Sbjct: 226 EKAKQALLEMVILPTKRKDLFTG 248


>ref|XP_002511743.1| Spastin, putative [Ricinus communis] gi|223548923|gb|EEF50412.1|
           Spastin, putative [Ricinus communis]
          Length = 518

 Score =  125 bits (313), Expect = 5e-27
 Identities = 82/171 (47%), Positives = 102/171 (59%), Gaps = 29/171 (16%)
 Frame = -1

Query: 427 KVKTYYQRISKWQGQISESLQVLSRLTASSTPSTSKTFVSRPKATVASSSP-----ISGT 263
           KVK+Y Q+ISKWQG ISE LQ L+R  A+ T S   T      A V+SS       +S  
Sbjct: 105 KVKSYRQKISKWQGHISERLQALNR-RAAGTSSNKNTLTHAHTAAVSSSKSNFRQDLSQK 163

Query: 262 RRNATR-APLVSGRYNVAV----------------------RNQTDSAIGSKPARQSGN- 155
              +TR  P+V  + N A                       RNQ D+A   K A++SGN 
Sbjct: 164 SPCSTRNTPVVRNQPNKAAKSKIAQNMPQNSPRSTGNTAVTRNQPDTAAKPKSAQESGNG 223

Query: 154 YDSKLVEMIESAIVNKSPSVKWEDVAGLEKAKQSLLEMVIIPTHRPDLFPG 2
           Y++KLVEMI +AIV++SPSVKW+DVAGLEKAKQSL+EMVI+PT R DLF G
Sbjct: 224 YEAKLVEMINTAIVDRSPSVKWDDVAGLEKAKQSLMEMVILPTKRRDLFTG 274


>gb|AAL25088.1|AF426837_1 Tobacco mosaic virus helicase domain-binding protein [Nicotiana
           tabacum]
          Length = 537

 Score =  124 bits (312), Expect = 6e-27
 Identities = 72/153 (47%), Positives = 98/153 (64%), Gaps = 11/153 (7%)
 Frame = -1

Query: 427 KVKTYYQRISKWQGQISESLQVLSRLTAS------STPSTSKTFVSRPKATV----ASSS 278
           KVK+Y Q+++KW+ Q+SE LQ LSR          S P T +  VS+  ++     + ++
Sbjct: 143 KVKSYRQKLTKWKSQVSERLQTLSRRAGGTSAVKISAPQTQRLAVSQSSSSARKGESRTA 202

Query: 277 PISGTRRNATRAPLVSGRYNVAVRNQTDSAIGSKPARQSGN-YDSKLVEMIESAIVNKSP 101
           P SG   +  R P  SG+ +   R   +S    KP+++S N YD KLV+MI S IV++SP
Sbjct: 203 PSSGRGSSVMRVPN-SGKDSSVARVPINSISSHKPSQESANGYDPKLVDMINSVIVDRSP 261

Query: 100 SVKWEDVAGLEKAKQSLLEMVIIPTHRPDLFPG 2
           SVKWED+AGLEKAKQ+LLEMVI+PT R DLF G
Sbjct: 262 SVKWEDIAGLEKAKQALLEMVILPTKRKDLFTG 294


>ref|XP_003623772.1| Spastin [Medicago truncatula] gi|355498787|gb|AES79990.1| Spastin
           [Medicago truncatula]
          Length = 486

 Score =  121 bits (304), Expect = 5e-26
 Identities = 69/143 (48%), Positives = 93/143 (65%), Gaps = 1/143 (0%)
 Frame = -1

Query: 427 KVKTYYQRISKWQGQISESLQVLSRLTASSTPSTSKTFVSRPKATVASSSPISGTRRNAT 248
           KV++Y Q+ISKWQGQ+SE LQ LSR   SS  + S    S    T A  + +S T +   
Sbjct: 111 KVQSYRQKISKWQGQVSERLQALSRRAGSSFANQS---TSNRAQTAAVPTKLSNTTKKVL 167

Query: 247 RAPLVSGRYNVAVRNQTDSAIGSKPARQSG-NYDSKLVEMIESAIVNKSPSVKWEDVAGL 71
           +        N   +++ +     KP++ SG NYD+KLVEMI +AIV++SPSV+W+DV GL
Sbjct: 168 QK-------NPQRKDEVNKVQSPKPSQTSGENYDTKLVEMINTAIVDRSPSVRWDDVGGL 220

Query: 70  EKAKQSLLEMVIIPTHRPDLFPG 2
           EKAKQ+L+EMVI+PT R DLF G
Sbjct: 221 EKAKQALMEMVILPTKRRDLFTG 243


>ref|XP_003623748.1| Spastin [Medicago truncatula] gi|355498763|gb|AES79966.1| Spastin
           [Medicago truncatula]
          Length = 315

 Score =  121 bits (304), Expect = 5e-26
 Identities = 69/143 (48%), Positives = 93/143 (65%), Gaps = 1/143 (0%)
 Frame = -1

Query: 427 KVKTYYQRISKWQGQISESLQVLSRLTASSTPSTSKTFVSRPKATVASSSPISGTRRNAT 248
           KV++Y Q+ISKWQGQ+SE LQ LSR   SS  + S    S    T A  + +S T +   
Sbjct: 105 KVQSYRQKISKWQGQVSERLQALSRRAGSSFANQS---TSNRAQTAAVPTKLSNTTKKVL 161

Query: 247 RAPLVSGRYNVAVRNQTDSAIGSKPARQSG-NYDSKLVEMIESAIVNKSPSVKWEDVAGL 71
           +        N   +++ +     KP++ SG NYD+KLVEMI +AIV++SPSV+W+DV GL
Sbjct: 162 QK-------NPQRKDEVNKVQSPKPSQTSGENYDTKLVEMINTAIVDRSPSVRWDDVGGL 214

Query: 70  EKAKQSLLEMVIIPTHRPDLFPG 2
           EKAKQ+L+EMVI+PT R DLF G
Sbjct: 215 EKAKQALMEMVILPTKRRDLFTG 237


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