BLASTX nr result

ID: Papaver23_contig00020856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00020856
         (777 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...   122   9e-26
gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]                  118   2e-24
ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II tra...    92   1e-16
ref|XP_004137040.1| PREDICTED: uncharacterized protein LOC101220...    92   1e-16
ref|XP_003547623.1| PREDICTED: uncharacterized protein LOC100783...    84   3e-14

>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
           gi|223530005|gb|EEF31930.1| transcription cofactor,
           putative [Ricinus communis]
          Length = 1382

 Score =  122 bits (306), Expect = 9e-26
 Identities = 79/157 (50%), Positives = 96/157 (61%), Gaps = 5/157 (3%)
 Frame = +2

Query: 2   FNAATSQLEYLRKISMKMMNMETKSQTNGVANSLPLNNGGGSQNPQDP-VSHSMQSQVRN 178
           + AATSQ +YLRKIS+KM+ ME+KSQ N V NS+P N  G +  P DP  S SMQ QV N
Sbjct: 69  YTAATSQSDYLRKISLKMLTMESKSQ-NNVPNSVPPNPFGNNNRPPDPGASQSMQPQVHN 127

Query: 179 PGQS-QIPL-ANESQARXXXXXXXXXXXXXXXXXXXPVALSSALPSGANLTHSSMPNAVN 352
            GQS  +PL AN++Q R                      L+SALP  + L  +S+PN V 
Sbjct: 128 QGQSLPVPLSANQTQTRQQLLSQNIQNNMASTGIQSSAGLTSALPPVSGLAQTSIPNVVG 187

Query: 353 QGSNMQ--SGMTQNSSGNLVGQGGVASNRFANSTRQM 457
           Q SNMQ  SG+ QNS+GN +GQ GV SN FANS RQM
Sbjct: 188 QNSNMQNISGVPQNSAGNSLGQ-GVPSNMFANSQRQM 223


>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
          Length = 1405

 Score =  118 bits (295), Expect = 2e-24
 Identities = 79/156 (50%), Positives = 97/156 (62%), Gaps = 4/156 (2%)
 Frame = +2

Query: 2   FNAATSQLEYLRKISMKMMNMETKSQTNGVANSLPLNNGGGSQNPQDPVSHSMQSQVRNP 181
           + AA+SQ +YLRKIS+KM++ME+KSQ N + NSL  NN G S  P DP   SMQ+QV N 
Sbjct: 84  YTAASSQSDYLRKISLKMLSMESKSQ-NAMPNSLQSNNPGSSNRPPDP--GSMQNQVHNQ 140

Query: 182 GQS-QIPL-ANESQARXXXXXXXXXXXXXXXXXXXPVALSSALPSGANLTHSSMPNAVNQ 355
           GQS  IPL AN+SQ R                      LSSALPS + L+ S +P+ V Q
Sbjct: 141 GQSLPIPLSANQSQVRQQLLSQNIQNNMSSAGVQGSSGLSSALPSVSGLSQSPIPSVVGQ 200

Query: 356 GSNMQ--SGMTQNSSGNLVGQGGVASNRFANSTRQM 457
             NMQ  SG++QNS GN +GQ GV SN FANS RQ+
Sbjct: 201 TVNMQNMSGISQNSGGNSMGQ-GVPSNLFANSQRQI 235


>ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like, partial [Cucumis sativus]
          Length = 589

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 67/154 (43%), Positives = 80/154 (51%), Gaps = 2/154 (1%)
 Frame = +2

Query: 2   FNAATSQLEYLRKISMKMMNMETKSQTNGVANSLPLNNGGGSQNPQDPVSHSMQSQVRNP 181
           F AATSQ +YLRKIS+KM+ METK+Q   + N LP N       P D  S SMQ  V N 
Sbjct: 68  FTAATSQSDYLRKISLKMLTMETKTQP-PMGNPLPSNPMVPGNKPLDASSQSMQPPVINQ 126

Query: 182 GQSQIPLANESQARXXXXXXXXXXXXXXXXXXXPVALSSALPSGANLTHSSMPNAVNQGS 361
           G S I +   S                        +LSSA+P  A L  SSM N V Q  
Sbjct: 127 GPS-ISVPQSSNQPQPRQQILQQNIPNNIVPQSSSSLSSAVPPVAGLASSSMSNMVGQNP 185

Query: 362 NMQ--SGMTQNSSGNLVGQGGVASNRFANSTRQM 457
           N+Q  SG+ QNS GN +GQ GV SN F+NS R +
Sbjct: 186 NIQNVSGVPQNSGGNAMGQ-GVPSNVFSNSQRPL 218


>ref|XP_004137040.1| PREDICTED: uncharacterized protein LOC101220890 [Cucumis sativus]
          Length = 1345

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 67/154 (43%), Positives = 80/154 (51%), Gaps = 2/154 (1%)
 Frame = +2

Query: 2   FNAATSQLEYLRKISMKMMNMETKSQTNGVANSLPLNNGGGSQNPQDPVSHSMQSQVRNP 181
           F AATSQ +YLRKIS+KM+ METK+Q   + N LP N       P D  S SMQ  V N 
Sbjct: 73  FTAATSQSDYLRKISLKMLTMETKTQP-PMGNPLPSNPMVPGNKPLDASSQSMQPPVINQ 131

Query: 182 GQSQIPLANESQARXXXXXXXXXXXXXXXXXXXPVALSSALPSGANLTHSSMPNAVNQGS 361
           G S I +   S                        +LSSA+P  A L  SSM N V Q  
Sbjct: 132 GPS-ISVPQSSNQPQPRQQILQQNIPNNIVPQSSSSLSSAVPPVAGLASSSMSNMVGQNP 190

Query: 362 NMQ--SGMTQNSSGNLVGQGGVASNRFANSTRQM 457
           N+Q  SG+ QNS GN +GQ GV SN F+NS R +
Sbjct: 191 NIQNVSGVPQNSGGNAMGQ-GVPSNVFSNSQRPL 223


>ref|XP_003547623.1| PREDICTED: uncharacterized protein LOC100783762 [Glycine max]
          Length = 1313

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 57/154 (37%), Positives = 80/154 (51%), Gaps = 2/154 (1%)
 Frame = +2

Query: 2   FNAATSQLEYLRKISMKMMNMETKSQTNGVANSLPLNNGGGSQNPQDPVSHSMQSQVRNP 181
           F AATSQ +YLRKIS+KM+ METKSQ   +A +LP N GG S  P DP    +  QV NP
Sbjct: 68  FTAATSQSDYLRKISLKMLTMETKSQ-GSMAPNLPPNQGGPSNKPPDP-GLGIPPQVHNP 125

Query: 182 GQSQ-IPLANESQARXXXXXXXXXXXXXXXXXXXPVALSSALPS-GANLTHSSMPNAVNQ 355
           GQ   IP++N++  R                   P  + +++ S  +N+  + + N    
Sbjct: 126 GQQHPIPMSNQTPNR---------------QQLLPQNIQNSIASQPSNIAQAPIQNVGQN 170

Query: 356 GSNMQSGMTQNSSGNLVGQGGVASNRFANSTRQM 457
             N+Q+   QNS G+ +GQ     N F  S RQ+
Sbjct: 171 NPNVQNIPGQNSVGSTIGQNANMQNMFPGSQRQI 204


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