BLASTX nr result
ID: Papaver23_contig00020823
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00020823
(681 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAJ53149.1| JHL23J11.4 [Jatropha curcas] 84 8e-26
ref|XP_002512940.1| Splicing factor U2AF-associated protein, put... 82 2e-25
ref|XP_002316170.1| predicted protein [Populus trichocarpa] gi|2... 86 8e-24
ref|XP_003556435.1| PREDICTED: HIV Tat-specific factor 1 homolog... 84 9e-23
ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog... 81 2e-22
>dbj|BAJ53149.1| JHL23J11.4 [Jatropha curcas]
Length = 552
Score = 84.3 bits (207), Expect(3) = 8e-26
Identities = 50/101 (49%), Positives = 60/101 (59%), Gaps = 31/101 (30%)
Frame = -1
Query: 264 KVNTHVYITGLLYDVTA-EVVEVFSRCGVIKE---------------------------- 172
KVNTH+Y+TGL DVTA EVVEVFS+CG+IKE
Sbjct: 306 KVNTHIYVTGLPDDVTAEEVVEVFSKCGIIKEDPETKKPRVKIYVDKETGRTKGDALITY 365
Query: 171 --EPSFELAIKILDRAPFRPGGTPLVTVSPAKFEPKGDKFI 55
EPS +LA++ILD P RPGGT ++VS AKFE KGD+FI
Sbjct: 366 LKEPSVDLAMQILDGTPLRPGGTIPMSVSRAKFEQKGDRFI 406
Score = 42.0 bits (97), Expect(3) = 8e-26
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = -2
Query: 491 DEMTYPQEEELFPSVLGTDISSKGKVDDTTKTEEAKPDTKRK 366
DEMT+ QEEE+FP+V D +SK K + T+ T E K + KRK
Sbjct: 229 DEMTFLQEEEVFPTVNIEDAASKEKFNGTSDTLEPKHNGKRK 270
Score = 37.0 bits (84), Expect(3) = 8e-26
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3
Query: 565 YKWDRGLRAWVPQENLVS 512
YKWDRGLRAWVPQ++ S
Sbjct: 204 YKWDRGLRAWVPQDDTSS 221
>ref|XP_002512940.1| Splicing factor U2AF-associated protein, putative [Ricinus
communis] gi|223547951|gb|EEF49443.1| Splicing factor
U2AF-associated protein, putative [Ricinus communis]
Length = 518
Score = 81.6 bits (200), Expect(3) = 2e-25
Identities = 49/101 (48%), Positives = 59/101 (58%), Gaps = 31/101 (30%)
Frame = -1
Query: 264 KVNTHVYITGLLYDVTA-EVVEVFSRCGVIKE---------------------------- 172
KVNTHVYITGL DVT+ EVVEVFS+CG+IKE
Sbjct: 272 KVNTHVYITGLPDDVTSEEVVEVFSKCGIIKEDPETKKPRVKIYVDKETGRIKGDALVTF 331
Query: 171 --EPSFELAIKILDRAPFRPGGTPLVTVSPAKFEPKGDKFI 55
EPS +LA++ILD P RPGG ++VS AKF+ KGD+FI
Sbjct: 332 LKEPSVDLALQILDGTPLRPGGAVPMSVSRAKFQQKGDRFI 372
Score = 50.1 bits (118), Expect(3) = 2e-25
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = -3
Query: 679 TSNNDDEFAKWQTW----RVDVERPSXXXXXXXXXXXXXXXPYKWDRGLRAWVPQENLVS 512
+++N+DEF KWQ + +RP YKWDRGLRAWVPQ+N S
Sbjct: 121 SNDNEDEFEKWQREISEAEAEADRPQSPPEGEEEFTDDDGTTYKWDRGLRAWVPQDNTSS 180
Score = 30.4 bits (67), Expect(3) = 2e-25
Identities = 16/44 (36%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Frame = -2
Query: 491 DEMTYPQEEELFPSVLGTDISSKGKVDDTTKTE--EAKPDTKRK 366
+EMT+ QEE++FP+V + + K +++ + ++E E+K + KRK
Sbjct: 188 EEMTFLQEEDVFPTVDINNAAFKEEINGSGESETLESKHNGKRK 231
>ref|XP_002316170.1| predicted protein [Populus trichocarpa] gi|222865210|gb|EEF02341.1|
predicted protein [Populus trichocarpa]
Length = 497
Score = 86.3 bits (212), Expect(3) = 8e-24
Identities = 52/102 (50%), Positives = 61/102 (59%), Gaps = 31/102 (30%)
Frame = -1
Query: 264 KVNTHVYITGLLYDVTA-EVVEVFSRCGVIKE---------------------------- 172
KVNTHVY+TGL DVTA EVVEVFS+CGVIKE
Sbjct: 251 KVNTHVYVTGLPDDVTAEEVVEVFSKCGVIKEDPEKKKPRVKIYVDKETGRIKGDALVTY 310
Query: 171 --EPSFELAIKILDRAPFRPGGTPLVTVSPAKFEPKGDKFIT 52
EPS +LA++ILD P RPGGT ++V+ AKFE KGD+FIT
Sbjct: 311 LKEPSVDLAMQILDGTPLRPGGTIPMSVTQAKFEQKGDRFIT 352
Score = 39.3 bits (90), Expect(3) = 8e-24
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3
Query: 565 YKWDRGLRAWVPQENLVSKS 506
YKWDR LRAWVPQ+NL S S
Sbjct: 157 YKWDRSLRAWVPQDNLSSVS 176
Score = 30.8 bits (68), Expect(3) = 8e-24
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -2
Query: 491 DEMTYPQEEELFPSVLGTDISSKGKVDDTTKTEEAKPDTKRK 366
++MT+ ++EE+F +V D S K + + T + E++ KRK
Sbjct: 182 EQMTFHEQEEVFLNVNAADASLKDEANGTGEVVESQRSDKRK 223
>ref|XP_003556435.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max]
Length = 500
Score = 83.6 bits (205), Expect(3) = 9e-23
Identities = 49/102 (48%), Positives = 59/102 (57%), Gaps = 31/102 (30%)
Frame = -1
Query: 264 KVNTHVYITGLLYDVTA-EVVEVFSRCGVIKE---------------------------- 172
K+NTHVY+TGL DVT E+VEVFS+CG+IKE
Sbjct: 254 KINTHVYVTGLPEDVTTDEIVEVFSKCGIIKEDPETKRPRVKLYVDKETGRKKGDALVTY 313
Query: 171 --EPSFELAIKILDRAPFRPGGTPLVTVSPAKFEPKGDKFIT 52
EPS LAI+ILD AP RPGG ++VS AKFE KGDKF++
Sbjct: 314 LKEPSVALAIQILDGAPLRPGGKIPMSVSQAKFEQKGDKFVS 355
Score = 37.4 bits (85), Expect(3) = 9e-23
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -3
Query: 631 DVERPSXXXXXXXXXXXXXXXPYKWDRGLRAWVPQE 524
D ERPS YKWDR LRAWVPQ+
Sbjct: 133 DSERPSTPPEGEEGFTDDDGTVYKWDRSLRAWVPQD 168
Score = 32.0 bits (71), Expect(3) = 9e-23
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -2
Query: 536 GSPRKLGLEKRGKL*DEMTYPQEEELFPSVLGTDISSKGKVDDTTKTEEAKPDTKRK 366
GS + G+E EMT+ +EEE+FP++ +D S K +D+ K + P K +
Sbjct: 172 GSTKPYGVE-------EMTFLEEEEVFPTIPNSDASE--KFEDSPKLSVSVPPLKEE 219
>ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max]
Length = 503
Score = 81.3 bits (199), Expect(3) = 2e-22
Identities = 48/102 (47%), Positives = 58/102 (56%), Gaps = 31/102 (30%)
Frame = -1
Query: 264 KVNTHVYITGLLYDVTA-EVVEVFSRCGVIKE---------------------------- 172
K+NTHVY+TGL DVT E+VEVFS+CG+IKE
Sbjct: 257 KINTHVYVTGLPEDVTTDEIVEVFSKCGIIKEDPETKKPRVKLYVDKGTGRKKGDALVTY 316
Query: 171 --EPSFELAIKILDRAPFRPGGTPLVTVSPAKFEPKGDKFIT 52
EPS LAI+ILD AP RP G ++VS AKFE KGDKF++
Sbjct: 317 LKEPSVALAIQILDGAPLRPNGKIPMSVSQAKFEQKGDKFVS 358
Score = 40.0 bits (92), Expect(3) = 2e-22
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = -3
Query: 631 DVERPSXXXXXXXXXXXXXXXPYKWDRGLRAWVPQENLVSKSE 503
D ERPS YKWDR LRAWVPQE+ +E
Sbjct: 133 DSERPSTPPEGEEEFTDDDGTVYKWDRNLRAWVPQEHPTGSTE 175
Score = 30.4 bits (67), Expect(3) = 2e-22
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -2
Query: 488 EMTYPQEEELFPSVLGTDISSKGKVDDTTKTEEAKPDTKRKAPE 357
EMT+ +EEE+FP++ +D S K +D+ K + P K + E
Sbjct: 181 EMTFLEEEEVFPTIPISDASE--KFEDSPKLSVSVPPLKEETNE 222