BLASTX nr result
ID: Papaver23_contig00020653
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00020653
(543 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 115 2e-26
gb|AAD15377.1| putative non-LTR retroelement reverse transcripta... 112 2e-24
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 107 4e-24
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 104 6e-24
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana] 105 6e-24
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 115 bits (289), Expect(2) = 2e-26
Identities = 58/149 (38%), Positives = 83/149 (55%)
Frame = +3
Query: 54 LMIVYSCLLFCKVSEKTCESLVKLFKVFSIVSGQLMNLNKSGVFFSSKTDTSIRRRVEDI 233
L+ L FC+ S + E L +FK + SGQ +N KS + F K T R+R+ +
Sbjct: 1041 LLFADDSLFFCRASNQNIEQLALIFKKYEEASGQKINYAKSSIIFGQKIPTMRRQRLHRL 1100
Query: 234 LGVTAIPLTDKYLGSPLFTNRSKVECFEPLVDKMRTKIIGWNGGNLNNAGKTVMIKNVST 413
LG+ + KYLG P R KVE FE +V K++ + GW L+ AGK ++IK ++
Sbjct: 1101 LGIDNVRGGGKYLGLPEQLGRRKVELFEYIVTKVKERTEGWAYNYLSPAGKEIVIKAIAM 1160
Query: 414 SLYVYQMNCFKIPVKICNKITKLQRGYWW 500
+L VY MNCF +P ICN+I L +WW
Sbjct: 1161 ALPVYSMNCFLLPTLICNEINSLITAFWW 1189
Score = 28.1 bits (61), Expect(2) = 2e-26
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 5 GIKLVHNAPSISHLLFADDCL 67
G+K+ + +ISHLLFADD L
Sbjct: 1028 GMKITKDCLAISHLLFADDSL 1048
>gb|AAD15377.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1044
Score = 112 bits (279), Expect(2) = 2e-24
Identities = 51/149 (34%), Positives = 84/149 (56%)
Frame = +3
Query: 54 LMIVYSCLLFCKVSEKTCESLVKLFKVFSIVSGQLMNLNKSGVFFSSKTDTSIRRRVEDI 233
L+ + FC+ K+C++ + + K + SGQ++N +KS + FS KT I+ + I
Sbjct: 505 LLFADDTIFFCRSDLKSCKTFLCILKKYEEASGQMINKSKSAITFSRKTPDHIKTEAQQI 564
Query: 234 LGVTAIPLTDKYLGSPLFTNRSKVECFEPLVDKMRTKIIGWNGGNLNNAGKTVMIKNVST 413
LG+ + KYLG P R K + F +VD++R + + W+ L+ AGKT M+K+V
Sbjct: 565 LGIQLVGGLGKYLGLPKMFGRKKRDLFNQIVDRIRQRSLSWSSRFLSTAGKTTMLKSVLA 624
Query: 414 SLYVYQMNCFKIPVKICNKITKLQRGYWW 500
S+ Y M+CFK+ V +C +I +WW
Sbjct: 625 SMPTYTMSCFKLLVSLCKRIQSALTHFWW 653
Score = 25.8 bits (55), Expect(2) = 2e-24
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 5 GIKLVHNAPSISHLLFADDCL 67
G+++ P ++HLLFADD +
Sbjct: 492 GLRVSKGNPRVNHLLFADDTI 512
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 107 bits (268), Expect(2) = 4e-24
Identities = 56/149 (37%), Positives = 82/149 (55%)
Frame = +3
Query: 54 LMIVYSCLLFCKVSEKTCESLVKLFKVFSIVSGQLMNLNKSGVFFSSKTDTSIRRRVEDI 233
L+ + F K ++C L ++ + SGQ +N +KS V FSSKT S++ +V+ I
Sbjct: 574 LLFADDTMFFSKSDPESCNKLSEILSRYGKASGQSINFHKSSVTFSSKTPRSVKGQVKRI 633
Query: 234 LGVTAIPLTDKYLGSPLFTNRSKVECFEPLVDKMRTKIIGWNGGNLNNAGKTVMIKNVST 413
L + T KYLG P R K + F ++DK+R K W L+ AGK VM+K V
Sbjct: 634 LKIRKEGGTGKYLGLPEHFGRRKRDIFGAIIDKIRQKSHSWASRFLSQAGKQVMLKAVLA 693
Query: 414 SLYVYQMNCFKIPVKICNKITKLQRGYWW 500
S+ +Y M+CFK+P +C KI L +WW
Sbjct: 694 SMPLYSMSCFKLPSALCRKIQSLLTRFWW 722
Score = 28.5 bits (62), Expect(2) = 4e-24
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 5 GIKLVHNAPSISHLLFADDCL 67
G+++ N P ++HLLFADD +
Sbjct: 561 GVRVSINGPRVNHLLFADDTM 581
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 104 bits (260), Expect(2) = 6e-24
Identities = 51/149 (34%), Positives = 87/149 (58%)
Frame = +3
Query: 54 LMIVYSCLLFCKVSEKTCESLVKLFKVFSIVSGQLMNLNKSGVFFSSKTDTSIRRRVEDI 233
L+ L FCK +++ C ++++ K + VSGQ +N +KS + F K + SI+ ++ I
Sbjct: 463 LLFADDSLFFCKANKEQCGIILEILKQYESVSGQQINFSKSSIQFGHKVEDSIKADIKLI 522
Query: 234 LGVTAIPLTDKYLGSPLFTNRSKVECFEPLVDKMRTKIIGWNGGNLNNAGKTVMIKNVST 413
LG+ + YLG P SK + F + D+++++I GW+ L+ GK VMIK+V+
Sbjct: 523 LGIHNLGGMGSYLGLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAA 582
Query: 414 SLYVYQMNCFKIPVKICNKITKLQRGYWW 500
+L Y M+CF++P I +K+T +WW
Sbjct: 583 TLPRYVMSCFRLPKAITSKLTSAVAKFWW 611
Score = 31.2 bits (69), Expect(2) = 6e-24
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 5 GIKLVHNAPSISHLLFADDCL 67
GIK+ +P++SHLLFADD L
Sbjct: 450 GIKVATPSPAVSHLLFADDSL 470
>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
Length = 1023
Score = 105 bits (262), Expect(2) = 6e-24
Identities = 51/149 (34%), Positives = 82/149 (55%)
Frame = +3
Query: 54 LMIVYSCLLFCKVSEKTCESLVKLFKVFSIVSGQLMNLNKSGVFFSSKTDTSIRRRVEDI 233
L+ L FCK +++ C ++ + K + VSGQ++N +KS + F K I+ ++
Sbjct: 529 LLFANDSLFFCKANKEQCGVILGILKQYEAVSGQMINFSKSSIQFGHKVGDDIKAEIKSA 588
Query: 234 LGVTAIPLTDKYLGSPLFTNRSKVECFEPLVDKMRTKIIGWNGGNLNNAGKTVMIKNVST 413
LG+ +I YLG P SK F + D+++T+I GW+ L+ GK VMIK+V
Sbjct: 589 LGIHSIGGMGSYLGLPESLGGSKTRIFSFVRDRLQTRINGWSAKFLSKGGKEVMIKSVVA 648
Query: 414 SLYVYQMNCFKIPVKICNKITKLQRGYWW 500
L Y M+CF++P I +K+T +WW
Sbjct: 649 VLPTYVMSCFRLPKTITSKLTSAVAKFWW 677
Score = 30.4 bits (67), Expect(2) = 6e-24
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 5 GIKLVHNAPSISHLLFADDCL 67
GIK+ +PS+SHLLFA+D L
Sbjct: 516 GIKVATASPSVSHLLFANDSL 536