BLASTX nr result

ID: Papaver23_contig00020622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00020622
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA32827.1| 98b [Daucus carota]                                    61   4e-19
ref|XP_003631191.1| PREDICTED: LOW QUALITY PROTEIN: high mobilit...    62   5e-19
ref|XP_002273198.1| PREDICTED: high mobility group B protein 13-...    63   8e-19
emb|CAN70902.1| hypothetical protein VITISV_028213 [Vitis vinifera]    61   2e-18
ref|XP_002299486.1| high mobility group family [Populus trichoca...    64   2e-18

>dbj|BAA32827.1| 98b [Daucus carota]
          Length = 502

 Score = 61.2 bits (147), Expect(2) = 4e-19
 Identities = 28/41 (68%), Positives = 36/41 (87%)
 Frame = +1

Query: 325 KKIRIQMEENEALKLLEEDQKKKTAMELLEQYLQFKEKTEN 447
           K +  +  ENEA+KLLEE+QK++TAMELLEQY+QFKE+TEN
Sbjct: 235 KIVGAEKRENEAMKLLEEEQKQRTAMELLEQYMQFKEETEN 275



 Score = 58.2 bits (139), Expect(2) = 4e-19
 Identities = 36/101 (35%), Positives = 46/101 (45%)
 Frame = +2

Query: 32  RDLEEMLKSKEWELEIKGXXXXXXXXXXXXXXXXXXFNPAVSLPLVQSLRXXXXXXXXXX 211
           ++ EE L+ KE ELE +G                  F P V+ PLVQ+ +          
Sbjct: 108 KEREEALRRKEEELETRGREQEKLQIEIKKLGKMKEFKPTVNFPLVQAPKEKELGKKEKK 167

Query: 212 XXXXXXXXXXSSAYVLRCKDQWAEVKKENPDAKFKDVSKKL 334
                     S  Y L  KDQW EVKKENPDA+FK++S  L
Sbjct: 168 KVCPEKKKP-SPPYALWLKDQWTEVKKENPDAEFKEISTML 207


>ref|XP_003631191.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein
           6-like [Vitis vinifera]
          Length = 502

 Score = 62.0 bits (149), Expect(3) = 5e-19
 Identities = 38/99 (38%), Positives = 44/99 (44%)
 Frame = +2

Query: 41  EEMLKSKEWELEIKGXXXXXXXXXXXXXXXXXXFNPAVSLPLVQSLRXXXXXXXXXXXXX 220
           +EMLK KE ELE +G                  F P V+ PL                  
Sbjct: 169 DEMLKIKEEELETRGREQEKLQMELKKLQKLKKFKPTVTFPLHSLRDKEQEKKEKNKKRX 228

Query: 221 XXXXXXXSSAYVLRCKDQWAEVKKENPDAKFKDVSKKLG 337
                  S +YVL CKDQW E KK NPDA FK++SK LG
Sbjct: 229 CPETKRPSPSYVLXCKDQWNEAKKANPDADFKEISKILG 267



 Score = 56.6 bits (135), Expect(3) = 5e-19
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = +1

Query: 340 QMEENEALKLLEEDQKKKTAMELLEQYLQFKEKTE 444
           +  ENEAL+LLEE+QK+KTAMELLEQYLQFK++ E
Sbjct: 299 EKRENEALRLLEEEQKQKTAMELLEQYLQFKQEAE 333



 Score = 20.4 bits (41), Expect(3) = 5e-19
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +3

Query: 18  KEKTEEILK 44
           KEKTEE+LK
Sbjct: 158 KEKTEELLK 166


>ref|XP_002273198.1| PREDICTED: high mobility group B protein 13-like [Vitis vinifera]
          Length = 505

 Score = 63.2 bits (152), Expect(3) = 8e-19
 Identities = 39/99 (39%), Positives = 45/99 (45%)
 Frame = +2

Query: 41  EEMLKSKEWELEIKGXXXXXXXXXXXXXXXXXXFNPAVSLPLVQSLRXXXXXXXXXXXXX 220
           +EMLK KE ELE +G                  F P V+ PL  SLR             
Sbjct: 118 DEMLKIKEEELETRGREQEKLQMELKKLQKLKEFKPTVTFPL-HSLRDKEQEKKEKNKKG 176

Query: 221 XXXXXXXSSAYVLRCKDQWAEVKKENPDAKFKDVSKKLG 337
                  S +YVL CKDQW E KK NPDA FK++S  LG
Sbjct: 177 CPETKRPSPSYVLWCKDQWNEAKKANPDADFKEISNILG 215



 Score = 54.7 bits (130), Expect(3) = 8e-19
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = +1

Query: 340 QMEENEALKLLEEDQKKKTAMELLEQYLQFKEKTE 444
           +  ENEA++LLEE+QK+KTAMELLEQYLQFK+  E
Sbjct: 247 EKRENEAMRLLEEEQKQKTAMELLEQYLQFKQGAE 281



 Score = 20.4 bits (41), Expect(3) = 8e-19
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +3

Query: 18  KEKTEEILK 44
           KEKTEE+LK
Sbjct: 107 KEKTEELLK 115


>emb|CAN70902.1| hypothetical protein VITISV_028213 [Vitis vinifera]
          Length = 532

 Score = 61.2 bits (147), Expect(2) = 2e-18
 Identities = 38/99 (38%), Positives = 44/99 (44%)
 Frame = +2

Query: 41  EEMLKSKEWELEIKGXXXXXXXXXXXXXXXXXXFNPAVSLPLVQSLRXXXXXXXXXXXXX 220
           +EMLK KE ELE +G                  F P  + PL  SLR             
Sbjct: 118 DEMLKIKEEELETRGREQEKLQMELKKLQKLKEFKPTXTFPL-HSLRDKEQEKKEKNKKG 176

Query: 221 XXXXXXXSSAYVLRCKDQWAEVKKENPDAKFKDVSKKLG 337
                  S +YVL CKDQW E KK NPDA FK++S  LG
Sbjct: 177 CPETKRPSPSYVLWCKDQWNEAKKANPDADFKEISNILG 215



 Score = 55.8 bits (133), Expect(2) = 2e-18
 Identities = 25/35 (71%), Positives = 32/35 (91%)
 Frame = +1

Query: 340 QMEENEALKLLEEDQKKKTAMELLEQYLQFKEKTE 444
           +  ENEA++LLEE+QK+KTAMELLEQYLQFK++ E
Sbjct: 247 EKRENEAMRLLEEEQKQKTAMELLEQYLQFKQEAE 281


>ref|XP_002299486.1| high mobility group family [Populus trichocarpa]
           gi|222846744|gb|EEE84291.1| high mobility group family
           [Populus trichocarpa]
          Length = 498

 Score = 63.9 bits (154), Expect(2) = 2e-18
 Identities = 38/102 (37%), Positives = 49/102 (48%)
 Frame = +2

Query: 32  RDLEEMLKSKEWELEIKGXXXXXXXXXXXXXXXXXXFNPAVSLPLVQSLRXXXXXXXXXX 211
           ++ +EMLK+K+ E+E+KG                  F P ++LP VQ L           
Sbjct: 116 KEKDEMLKAKDEEIEMKGKEQEKMKTELKKLQKLKEFKPIMTLPFVQVLNEKEQDKKKKK 175

Query: 212 XXXXXXXXXXSSAYVLRCKDQWAEVKKENPDAKFKDVSKKLG 337
                        Y L CKDQW EVKKENPDA+FKD+S  LG
Sbjct: 176 GGNEIKRPCPP--YSLWCKDQWNEVKKENPDAEFKDISHILG 215



 Score = 53.1 bits (126), Expect(2) = 2e-18
 Identities = 24/33 (72%), Positives = 31/33 (93%)
 Frame = +1

Query: 340 QMEENEALKLLEEDQKKKTAMELLEQYLQFKEK 438
           +  E+EA+KLLEE+QK+KTAMELLEQYLQFK++
Sbjct: 247 EKRESEAMKLLEEEQKQKTAMELLEQYLQFKQE 279


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