BLASTX nr result

ID: Papaver23_contig00020581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00020581
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       230   8e-59
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]       230   8e-59
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      229   2e-58
gb|ABI34378.1| RNA-directed RNA polymerase, putative [Solanum tu...   228   3e-58
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      227   7e-58

>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  230 bits (587), Expect = 8e-59
 Identities = 116/167 (69%), Positives = 131/167 (78%)
 Frame = -3

Query: 501 QLRDNSAWMFASKGPLTAASIRDWMGDFRKIRNVAKYAARLGQSFGSSTETLSVSXXXXX 322
           QLRDNS WMFAS+  LTA  IR WMGDFR+IRNVAKYAARLGQSFGSS ETLSV      
Sbjct: 451 QLRDNSVWMFASRPGLTANDIRTWMGDFRQIRNVAKYAARLGQSFGSSRETLSVGRHEVE 510

Query: 321 XXXXXXXESNGTIYTFSDGIGKISSEFAHKVANKCGLKCTPSAFQIRYGGYKGVVAVDPR 142
                    +GT Y FSDGIGKIS++FAH+V  KCGL+ TPS+FQIRYGGYKGVVAVDP 
Sbjct: 511 VIPDVACSLHGTNYIFSDGIGKISADFAHRVTIKCGLQYTPSSFQIRYGGYKGVVAVDPY 570

Query: 141 AVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGV 1
           +  KL LRKSM K+ S N KLDVL WSK+QPC+LNRQ+++LLSTLGV
Sbjct: 571 SSMKLSLRKSMLKYESNNIKLDVLGWSKYQPCYLNRQLVTLLSTLGV 617


>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
          Length = 775

 Score =  230 bits (587), Expect = 8e-59
 Identities = 117/167 (70%), Positives = 133/167 (79%)
 Frame = -3

Query: 501 QLRDNSAWMFASKGPLTAASIRDWMGDFRKIRNVAKYAARLGQSFGSSTETLSVSXXXXX 322
           QLRDNS WMFAS+  LTA  IR WMGDF++IRNVAKYAARLGQSFGSS ETLSV      
Sbjct: 144 QLRDNSVWMFASRPGLTAYDIRTWMGDFQQIRNVAKYAARLGQSFGSSRETLSVGRHEIK 203

Query: 321 XXXXXXXESNGTIYTFSDGIGKISSEFAHKVANKCGLKCTPSAFQIRYGGYKGVVAVDPR 142
                    +GT Y FSDGIGKIS++FAH+VA KCGL+ TPSAFQIRYGGYKGVVAVDP 
Sbjct: 204 YIPDVEV--HGTNYVFSDGIGKISADFAHRVAKKCGLQHTPSAFQIRYGGYKGVVAVDPY 261

Query: 141 AVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGV 1
           +  KL LRKSM K+ S NTKLDVL WSK+QPC+LNRQ+++L+STLGV
Sbjct: 262 SPMKLSLRKSMLKYESNNTKLDVLGWSKYQPCYLNRQLVTLMSTLGV 308


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  229 bits (584), Expect = 2e-58
 Identities = 120/168 (71%), Positives = 134/168 (79%), Gaps = 1/168 (0%)
 Frame = -3

Query: 501 QLRDNSAWMFASKGPLTAASIRDWMGDFRKIRNVAKYAARLGQSFGSSTETLSVSXXXXX 322
           QLR+NSAWMFAS+  LTAA IR WMG+F KIRNVAKYAARLGQSF SSTETLSVS     
Sbjct: 455 QLRENSAWMFASRKGLTAADIRSWMGNFSKIRNVAKYAARLGQSFSSSTETLSVSKDEIN 514

Query: 321 XXXXXXXESNGTIYTFSDGIGKISSEFAHKVANKCGLK-CTPSAFQIRYGGYKGVVAVDP 145
                    +G  Y FSDGIGKIS+EFA KVA KC LK CTPSAFQIR GG+KGVVA+DP
Sbjct: 515 LIPDIEIMKDGIKYVFSDGIGKISAEFAKKVAAKCRLKGCTPSAFQIRIGGFKGVVAIDP 574

Query: 144 RAVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGV 1
            +  KL LRKSM K+ S+NTKLDVL+WSK+QPCFLNRQ+I+LLSTLGV
Sbjct: 575 TSSWKLSLRKSMEKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLGV 622


>gb|ABI34378.1| RNA-directed RNA polymerase, putative [Solanum tuberosum]
          Length = 1050

 Score =  228 bits (582), Expect = 3e-58
 Identities = 118/167 (70%), Positives = 132/167 (79%)
 Frame = -3

Query: 501 QLRDNSAWMFASKGPLTAASIRDWMGDFRKIRNVAKYAARLGQSFGSSTETLSVSXXXXX 322
           QLRDNS WMFAS+  LTA  IR WMGDF +I+NVAKYAARLGQSFGSSTETLSV      
Sbjct: 299 QLRDNSVWMFASRPGLTANDIRTWMGDFSQIKNVAKYAARLGQSFGSSTETLSVLRHEIE 358

Query: 321 XXXXXXXESNGTIYTFSDGIGKISSEFAHKVANKCGLKCTPSAFQIRYGGYKGVVAVDPR 142
                    +GT Y FSDGIGKIS++FA +VA+KCGL+ TPSAFQIRYGGYKGVVAVDP 
Sbjct: 359 VIPDVKV--HGTSYVFSDGIGKISADFARRVASKCGLQYTPSAFQIRYGGYKGVVAVDPY 416

Query: 141 AVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGV 1
           +  KL LRKSM K+ S N KLDVL WSK+QPCFLNRQ+I+LLSTLGV
Sbjct: 417 SSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCFLNRQLITLLSTLGV 463


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  227 bits (579), Expect = 7e-58
 Identities = 119/168 (70%), Positives = 133/168 (79%), Gaps = 1/168 (0%)
 Frame = -3

Query: 501 QLRDNSAWMFASKGPLTAASIRDWMGDFRKIRNVAKYAARLGQSFGSSTETLSVSXXXXX 322
           QLR+NSAWMFAS+  LTAA IR WMG+F KIRNVAKYAARLGQSF SSTETLSVS     
Sbjct: 455 QLRENSAWMFASRKGLTAADIRSWMGNFSKIRNVAKYAARLGQSFSSSTETLSVSKDEIN 514

Query: 321 XXXXXXXESNGTIYTFSDGIGKISSEFAHKVANKCGLK-CTPSAFQIRYGGYKGVVAVDP 145
                    +G  Y F DGIGKIS+EFA KVA KC LK CTPSAFQIR GG+KGVVA+DP
Sbjct: 515 LIPDIEIMKDGIKYVFPDGIGKISAEFAKKVAAKCRLKGCTPSAFQIRIGGFKGVVAIDP 574

Query: 144 RAVKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGV 1
            +  KL LRKSM K+ S+NTKLDVL+WSK+QPCFLNRQ+I+LLSTLGV
Sbjct: 575 TSSWKLSLRKSMEKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLGV 622


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