BLASTX nr result

ID: Papaver23_contig00020557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00020557
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containi...    42   7e-07

>ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Vitis vinifera]
          Length = 667

 Score = 41.6 bits (96), Expect(2) = 7e-07
 Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
 Frame = -2

Query: 149 YEDFLILFKEM-ECLGLRFDGVTVVSFLVAFAQLKYLDLGRKVHQLVVK 6
           YED   L+++M +  GLR +GVTVVS L A AQ   L  G KVHQ +++
Sbjct: 221 YEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVHQFIIE 269



 Score = 37.4 bits (85), Expect(2) = 7e-07
 Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = -3

Query: 274 ESDLLVINGLTTCYAQSRELRLVN-LFDQVQERDIVSW 164
           +SD+ V+N L T Y++  E  +   LFD++ +RDIVSW
Sbjct: 171 DSDIFVVNALITYYSRCDEYGIARILFDRMHDRDIVSW 208


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