BLASTX nr result

ID: Papaver23_contig00020546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00020546
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...    70   4e-10
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...    70   4e-10
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]    69   8e-10
ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [S...    67   2e-09

>ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|222842328|gb|EEE79875.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 36/89 (40%), Positives = 53/89 (59%)
 Frame = +2

Query: 395 IGTAGGLVLAWTSKISIQLIHSSDNQIDVVVTDRSRNFEWLLSAIYGCPYKVKKHLSWSY 574
           +G  GGL + W S  S+ L+  S+N ID++V + + NF W  +  YG P + +K  SW+ 
Sbjct: 47  LGRGGGLAVLWRSSASVSLLGYSNNHIDLLVVE-ANNFIWRFTGYYGLPDRNRKMESWNL 105

Query: 575 FRGLATTVDLPWIVVGDMNFVLNDEEKRG 661
            R L+    LPW+ +GD N +L  EEKRG
Sbjct: 106 LRALSRQSALPWVCMGDYNDMLCAEEKRG 134


>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
           42.57) [Arabidopsis thaliana]
          Length = 1662

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 32/88 (36%), Positives = 53/88 (60%)
 Frame = +2

Query: 398 GTAGGLVLAWTSKISIQLIHSSDNQIDVVVTDRSRNFEWLLSAIYGCPYKVKKHLSWSYF 577
           G +GGL L W   + +  ++  D  IDV ++  + NF   LS +YG P + ++H  W++F
Sbjct: 444 GHSGGLALLWKDSVRLSNLYQDDRHIDVHISINNINF--YLSRVYGHPCQSERHSLWTHF 501

Query: 578 RGLATTVDLPWIVVGDMNFVLNDEEKRG 661
             L+ T + PWI++GD N +L++ EK G
Sbjct: 502 ENLSKTRNDPWILIGDFNEILSNNEKIG 529


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
           putative protein [Arabidopsis thaliana]
          Length = 1294

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 32/88 (36%), Positives = 53/88 (60%)
 Frame = +2

Query: 398 GTAGGLVLAWTSKISIQLIHSSDNQIDVVVTDRSRNFEWLLSAIYGCPYKVKKHLSWSYF 577
           G +GGL L W   + +  ++  D  IDV ++  + NF   LS +YG P + ++H  W++F
Sbjct: 424 GHSGGLALLWKDSVRLSNLYQDDRHIDVHISINNINF--YLSRVYGHPCQSERHSLWTHF 481

Query: 578 RGLATTVDLPWIVVGDMNFVLNDEEKRG 661
             L+ T + PWI++GD N +L++ EK G
Sbjct: 482 ENLSKTRNDPWILIGDFNEILSNNEKIG 509


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score = 68.9 bits (167), Expect = 8e-10
 Identities = 31/89 (34%), Positives = 49/89 (55%)
 Frame = +2

Query: 395 IGTAGGLVLAWTSKISIQLIHSSDNQIDVVVTDRSRNFEWLLSAIYGCPYKVKKHLSWSY 574
           +G  GGL   W       L+  S + ID+ V++     +W ++  YG P + ++HLSW+ 
Sbjct: 368 VGRGGGLAFLWRKAGMFSLLXYSQSHIDMEVSEED-GLQWRVTGFYGFPDRSQRHLSWNL 426

Query: 575 FRGLATTVDLPWIVVGDMNFVLNDEEKRG 661
            R L +   LPW  +GD N ++ +EEKRG
Sbjct: 427 LRSLYSASSLPWCCLGDFNDIVCNEEKRG 455


>ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [Sorghum bicolor]
           gi|241936686|gb|EES09831.1| hypothetical protein
           SORBIDRAFT_05g019526 [Sorghum bicolor]
          Length = 1209

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 31/88 (35%), Positives = 52/88 (59%)
 Frame = +2

Query: 398 GTAGGLVLAWTSKISIQLIHSSDNQIDVVVTDRSRNFEWLLSAIYGCPYKVKKHLSWSYF 577
           G +GGL + W +KIS+QL+  S   IDV++++ S +  W L+ +YG    V+++ +W   
Sbjct: 327 GRSGGLGIFWNNKISVQLLPYSKYHIDVIISEGSAD-PWRLTCVYGEAQIVERYKTWDML 385

Query: 578 RGLATTVDLPWIVVGDMNFVLNDEEKRG 661
           + +     LPW+ +GD N VL+  E  G
Sbjct: 386 KSIKPNSSLPWVCIGDFNEVLHRSEHLG 413


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