BLASTX nr result

ID: Papaver23_contig00020325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00020325
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   166   2e-39
emb|CBI17233.3| unnamed protein product [Vitis vinifera]              166   2e-39
ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protei...   164   9e-39
ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protei...   164   9e-39
ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protei...   164   9e-39

>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis vinifera]
          Length = 1139

 Score =  166 bits (419), Expect = 2e-39
 Identities = 83/142 (58%), Positives = 103/142 (72%), Gaps = 7/142 (4%)
 Frame = -3

Query: 409  MEKKNDFFEPTHMKKKRFRTGIYIRLEVHDVPFSMVENFNPCHPSLVGGINHLEENVGHM 230
            M + ND  E T ++ + FRTG Y+RLEVHDVPF MVE+F+P HP LVGGI   EENVG+M
Sbjct: 719  MAELNDLDEETRIEVEGFRTGTYLRLEVHDVPFEMVEHFDPFHPVLVGGIGLGEENVGYM 778

Query: 229  QARLKRHDWHMKLLKS------AAGWRRYQTIPIHAMELDCK-RHESAKYIPQYEHCLAM 71
            Q R+KRH WH KLLK+      + GWRRYQTIP++A E DC  RH   KY  ++ HCLAM
Sbjct: 779  QVRIKRHRWHKKLLKTRDPIIVSIGWRRYQTIPVYATE-DCNGRHRMLKYTKEHMHCLAM 837

Query: 70   FWGPLAPPHTRIAVVQGSISDN 5
            FWGPLAPP+T +  VQ ++S+N
Sbjct: 838  FWGPLAPPNTGVVAVQ-NLSNN 858


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  166 bits (419), Expect = 2e-39
 Identities = 83/142 (58%), Positives = 103/142 (72%), Gaps = 7/142 (4%)
 Frame = -3

Query: 409  MEKKNDFFEPTHMKKKRFRTGIYIRLEVHDVPFSMVENFNPCHPSLVGGINHLEENVGHM 230
            M + ND  E T ++ + FRTG Y+RLEVHDVPF MVE+F+P HP LVGGI   EENVG+M
Sbjct: 885  MAELNDLDEETRIEVEGFRTGTYLRLEVHDVPFEMVEHFDPFHPVLVGGIGLGEENVGYM 944

Query: 229  QARLKRHDWHMKLLKS------AAGWRRYQTIPIHAMELDCK-RHESAKYIPQYEHCLAM 71
            Q R+KRH WH KLLK+      + GWRRYQTIP++A E DC  RH   KY  ++ HCLAM
Sbjct: 945  QVRIKRHRWHKKLLKTRDPIIVSIGWRRYQTIPVYATE-DCNGRHRMLKYTKEHMHCLAM 1003

Query: 70   FWGPLAPPHTRIAVVQGSISDN 5
            FWGPLAPP+T +  VQ ++S+N
Sbjct: 1004 FWGPLAPPNTGVVAVQ-NLSNN 1024


>ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507882|gb|AES89024.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 988

 Score =  164 bits (414), Expect = 9e-39
 Identities = 80/137 (58%), Positives = 100/137 (72%), Gaps = 6/137 (4%)
 Frame = -3

Query: 397  NDFFEPTHMKKKRFRTGIYIRLEVHDVPFSMVENFNPCHPSLVGGINHLEENVGHMQARL 218
            ND  E T ++ + FRTG Y+RLEVHDVP  MVE+F+P HP LVGG+   EENVG+MQARL
Sbjct: 758  NDLDEDTRLEVEGFRTGTYLRLEVHDVPCEMVEHFDPYHPILVGGVGLGEENVGYMQARL 817

Query: 217  KRHDWHMKLLKS------AAGWRRYQTIPIHAMELDCKRHESAKYIPQYEHCLAMFWGPL 56
            KRH WH K+LK+      + GWRRYQT P++A+E    RH   KY P++ HCLAMFWGPL
Sbjct: 818  KRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDLNGRHRMLKYTPEHMHCLAMFWGPL 877

Query: 55   APPHTRIAVVQGSISDN 5
            APP+T I  VQ ++S+N
Sbjct: 878  APPNTGIVAVQ-TLSNN 893


>ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507881|gb|AES89023.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1175

 Score =  164 bits (414), Expect = 9e-39
 Identities = 80/137 (58%), Positives = 100/137 (72%), Gaps = 6/137 (4%)
 Frame = -3

Query: 397  NDFFEPTHMKKKRFRTGIYIRLEVHDVPFSMVENFNPCHPSLVGGINHLEENVGHMQARL 218
            ND  E T ++ + FRTG Y+RLEVHDVP  MVE+F+P HP LVGG+   EENVG+MQARL
Sbjct: 758  NDLDEDTRLEVEGFRTGTYLRLEVHDVPCEMVEHFDPYHPILVGGVGLGEENVGYMQARL 817

Query: 217  KRHDWHMKLLKS------AAGWRRYQTIPIHAMELDCKRHESAKYIPQYEHCLAMFWGPL 56
            KRH WH K+LK+      + GWRRYQT P++A+E    RH   KY P++ HCLAMFWGPL
Sbjct: 818  KRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDLNGRHRMLKYTPEHMHCLAMFWGPL 877

Query: 55   APPHTRIAVVQGSISDN 5
            APP+T I  VQ ++S+N
Sbjct: 878  APPNTGIVAVQ-TLSNN 893


>ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507880|gb|AES89022.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1200

 Score =  164 bits (414), Expect = 9e-39
 Identities = 80/137 (58%), Positives = 100/137 (72%), Gaps = 6/137 (4%)
 Frame = -3

Query: 397  NDFFEPTHMKKKRFRTGIYIRLEVHDVPFSMVENFNPCHPSLVGGINHLEENVGHMQARL 218
            ND  E T ++ + FRTG Y+RLEVHDVP  MVE+F+P HP LVGG+   EENVG+MQARL
Sbjct: 758  NDLDEDTRLEVEGFRTGTYLRLEVHDVPCEMVEHFDPYHPILVGGVGLGEENVGYMQARL 817

Query: 217  KRHDWHMKLLKS------AAGWRRYQTIPIHAMELDCKRHESAKYIPQYEHCLAMFWGPL 56
            KRH WH K+LK+      + GWRRYQT P++A+E    RH   KY P++ HCLAMFWGPL
Sbjct: 818  KRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDLNGRHRMLKYTPEHMHCLAMFWGPL 877

Query: 55   APPHTRIAVVQGSISDN 5
            APP+T I  VQ ++S+N
Sbjct: 878  APPNTGIVAVQ-TLSNN 893


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