BLASTX nr result

ID: Papaver23_contig00020292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00020292
         (1539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...   137   6e-30
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210...   137   1e-29
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   136   2e-29
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript...   135   3e-29
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...   132   2e-28

>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score =  137 bits (346), Expect = 6e-30
 Identities = 67/167 (40%), Positives = 103/167 (61%)
 Frame = +3

Query: 1035 SGQLISDAKSTLLTSANLGRSFSRGMAKALKVQITSDPGKYLGIPLQWGRISINTFNDLS 1214
            SGQ +S  KS +  S N+ R   + +++   +  T + GKYLG+P+   R++  TF ++ 
Sbjct: 573  SGQKVSLEKSKIFFSHNVSREMEQLISEESGIGCTKELGKYLGMPILQKRMNKETFGEVL 632

Query: 1215 EKLANRMQGWKSRTLNLAGRTTLIKSVLDPVSNHVMAMLKLPQGLIAKLNRYKRKFLWGG 1394
            E+++ R+ GWK R+L+LAGR TL K+VL  +  HVM+ + LP   +  L+RY R FLWG 
Sbjct: 633  ERVSARLAGWKGRSLSLAGRITLTKAVLSSIPVHVMSAILLPVSTLDTLDRYSRTFLWGS 692

Query: 1395 DKDKKCLHKLKWDKVCSPVEIGGLGIRDLELTNLALLAKMAWRVFEN 1535
              +KK  H L W K+C P   GG+G+R     N AL+AK+ WR+ ++
Sbjct: 693  TMEKKKQHLLSWRKICKPKAEGGIGLRSARDMNKALVAKVGWRLLQD 739


>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
            putative protein [Arabidopsis thaliana]
          Length = 947

 Score =  137 bits (344), Expect = 1e-29
 Identities = 68/167 (40%), Positives = 105/167 (62%)
 Frame = +3

Query: 1035 SGQLISDAKSTLLTSANLGRSFSRGMAKALKVQITSDPGKYLGIPLQWGRISINTFNDLS 1214
            SGQ +S  KS +  S N+ R   + ++K   ++ T + GKYLG+P+   RI+ +TF ++ 
Sbjct: 387  SGQKVSLDKSKIFFSKNVSRDLEKLISKESGIKSTRELGKYLGMPILQRRINKDTFGEVL 446

Query: 1215 EKLANRMQGWKSRTLNLAGRTTLIKSVLDPVSNHVMAMLKLPQGLIAKLNRYKRKFLWGG 1394
            E++++R+ GWK R+L+ AGR TL KSVL  +  H M+ + LPQ  +  L++  R FL G 
Sbjct: 447  ERVSSRLAGWKGRSLSFAGRLTLTKSVLSLIPIHTMSTISLPQSTLEGLDKLARVFLLGS 506

Query: 1395 DKDKKCLHKLKWDKVCSPVEIGGLGIRDLELTNLALLAKMAWRVFEN 1535
              +KK LH + WD+VC P   GGLGIR  +  N AL++K+ WR+  +
Sbjct: 507  SAEKKKLHLVAWDRVCLPKSEGGLGIRTSKCMNKALVSKVGWRLIND 553


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  136 bits (342), Expect = 2e-29
 Identities = 70/217 (32%), Positives = 119/217 (54%), Gaps = 1/217 (0%)
 Frame = +2

Query: 389  MKILTWNCRGLARPSFKRVMKQLIKKHKPSIVAILETRTIADHAKELVKNLGFSSSIIVE 568
            MK+L+WNC+GLA P     +  L  + +P+IV ++ET   +   +++ K  GF + + + 
Sbjct: 1    MKLLSWNCQGLANPWTVNALHSLCWRDRPNIVFVMETMVDSQVLEKIRKRCGFMNGLCLS 60

Query: 569  PCGFSGGMCILWNEEEIEIQATSHSRWAVHAVVTAKFQKP-WILSSVYASTNKANRKRVW 745
              G SGGM + WNE ++ ++  S S   +HAVV  + + P W    +Y     +N+   W
Sbjct: 61   SNGNSGGMGLWWNEMDVTVE--SFSAHHIHAVVLDENKNPIWNAMGIYGWPETSNKHLTW 118

Query: 746  EEMKGIDGVQNTESMVMGDLNTISSVQEKAGGKRPNTSKLEELKDVMNHCGLVDLGGHGP 925
              ++ +    +   +  GD N I+S++EK GG       ++  ++V++ C + DLG  G 
Sbjct: 119  SLLRRLKQQCSLPVLFFGDFNEITSIEEKEGGAPRCERVMDAFREVIDDCAVKDLGYVGN 178

Query: 926  KWTWNNKRTGFANIKERLDRALANPQWCSRFPNAQVV 1036
            ++TW    +    I+ERLDR LAN +WC  FP+ +VV
Sbjct: 179  RFTWQRGNSPSTLIRERLDRMLANDEWCDNFPSWEVV 215



 Score =  118 bits (295), Expect = 5e-24
 Identities = 60/171 (35%), Positives = 96/171 (56%)
 Frame = +3

Query: 1014 VSQMLRWSGQLISDAKSTLLTSANLGRSFSRGMAKALKVQITSDPGKYLGIPLQWGRISI 1193
            +S+  R SGQ ++ +K+ ++ S ++ R     +   L V+      KYLG+P   GR   
Sbjct: 706  ISKYERASGQQVNLSKTEVVFSRSVDRERRSAIVNVLGVKEVDRQEKYLGLPTIIGRSKK 765

Query: 1194 NTFNDLSEKLANRMQGWKSRTLNLAGRTTLIKSVLDPVSNHVMAMLKLPQGLIAKLNRYK 1373
             TF  + E++  ++QGWK + L+  G+  LIKSV   +  ++M++  LP GLI +++   
Sbjct: 766  VTFACIKERIWKKLQGWKEKLLSRPGKEVLIKSVAQAIPTYMMSVFSLPSGLIDEIHSLL 825

Query: 1374 RKFLWGGDKDKKCLHKLKWDKVCSPVEIGGLGIRDLELTNLALLAKMAWRV 1526
             +F WG     + +H   WD +C P  +GGLG RDL   N +LLAK AWR+
Sbjct: 826  ARFWWGSSDTNRKMHWHSWDTLCYPKSMGGLGFRDLHCFNQSLLAKQAWRL 876


>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 732

 Score =  135 bits (340), Expect = 3e-29
 Identities = 67/167 (40%), Positives = 100/167 (59%)
 Frame = +3

Query: 1035 SGQLISDAKSTLLTSANLGRSFSRGMAKALKVQITSDPGKYLGIPLQWGRISINTFNDLS 1214
            SGQ +S  KS +  S N+ R   + ++    +  T + GKYLG+P+   RI+ +TF D+ 
Sbjct: 235  SGQKVSLEKSKIFFSENVSRDLGKLISDESGISSTRELGKYLGMPVLQRRINKDTFGDIL 294

Query: 1215 EKLANRMQGWKSRTLNLAGRTTLIKSVLDPVSNHVMAMLKLPQGLIAKLNRYKRKFLWGG 1394
            EKL  R+ GWK R L+LAGR TL K+VL  +  H M+ + LP+  +  L++  R FLWG 
Sbjct: 295  EKLTTRLAGWKGRFLSLAGRVTLTKAVLSSIPVHTMSTIALPKSTLDGLDKVSRSFLWGS 354

Query: 1395 DKDKKCLHKLKWDKVCSPVEIGGLGIRDLELTNLALLAKMAWRVFEN 1535
               ++  H + W +VC P   GGLGIR  +  N ALL+K+ WR+ ++
Sbjct: 355  SVTQRKQHLISWKRVCKPRSEGGLGIRKAQDMNKALLSKVGWRLIQD 401


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
            gi|7268307|emb|CAB78601.1| reverse transcriptase like
            protein [Arabidopsis thaliana]
          Length = 929

 Score =  132 bits (333), Expect = 2e-28
 Identities = 75/200 (37%), Positives = 119/200 (59%), Gaps = 11/200 (5%)
 Frame = +3

Query: 969  RRDWTELLQILNGVAVSQMLRWSGQLISDAKSTLLTSANLGRS---FSRGMAKALKVQIT 1139
            R DW  +     G  VS +  ++  LI  A++++    +L +S   FS  +++ L+  IT
Sbjct: 476  RGDWKSISISQGGPKVSHVC-FADDLILFAEASVAQKVSLEKSKIFFSNNVSRDLEGLIT 534

Query: 1140 SDPG--------KYLGIPLQWGRISINTFNDLSEKLANRMQGWKSRTLNLAGRTTLIKSV 1295
            ++ G        KYLG+P+   RI+ +TF ++ E++++R+ GWKSR+L+LAGR TL K+V
Sbjct: 535  AETGIGSTRELGKYLGMPVLQKRINKDTFGEVLERVSSRLSGWKSRSLSLAGRITLTKAV 594

Query: 1296 LDPVSNHVMAMLKLPQGLIAKLNRYKRKFLWGGDKDKKCLHKLKWDKVCSPVEIGGLGIR 1475
            L  +  H M+ + LP  L+ +L++  R FLWG   +K+  H L W KVC P   GGLG+R
Sbjct: 595  LMSIPIHTMSSILLPASLLEQLDKVSRNFLWGSTVEKRKQHLLSWKKVCRPKAAGGLGLR 654

Query: 1476 DLELTNLALLAKMAWRVFEN 1535
              +  N ALLAK+ WR+  +
Sbjct: 655  ASKDMNRALLAKVGWRLLND 674


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