BLASTX nr result
ID: Papaver23_contig00020214
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00020214
(412 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420... 149 2e-38
ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|2... 145 2e-37
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei... 150 1e-34
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera] 150 1e-34
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc... 149 2e-34
>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
putative [Ricinus communis]
Length = 1809
Score = 149 bits (375), Expect(2) = 2e-38
Identities = 70/90 (77%), Positives = 77/90 (85%), Gaps = 3/90 (3%)
Frame = -1
Query: 262 DSLTSVD---VEHLFDAGWIQVCVASSSMCWGMALPAHLVVVMGTLYYDGRENIHTDYPV 92
+ L+S+D V LF+AGWIQVCV SSSMCWG+ L AHLVVVMGT YYDGREN HTDYPV
Sbjct: 1289 EGLSSLDQEVVSQLFEAGWIQVCVMSSSMCWGVPLAAHLVVVMGTQYYDGRENAHTDYPV 1348
Query: 91 ADLLQMMGHATRPLLDNSGKCMILCHAPWK 2
DLLQMMGHA+RPLLDNSGKC+ILCHAP K
Sbjct: 1349 TDLLQMMGHASRPLLDNSGKCVILCHAPRK 1378
Score = 35.0 bits (79), Expect(2) = 2e-38
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = -3
Query: 377 NADSGERPXXXXXXXXXXEPSISKVKESMLSSTLQHGVG 261
+ADSGE+P EP + +V++ ML STL+ GVG
Sbjct: 1247 SADSGEKPAFMMRSIEELEPFVGRVQDEMLRSTLRQGVG 1285
Score = 63.9 bits (154), Expect = 1e-08
Identities = 29/74 (39%), Positives = 48/74 (64%)
Frame = -1
Query: 241 VEHLFDAGWIQVCVASSSMCWGMALPAHLVVVMGTLYYDGRENIHTDYPVADLLQMMGHA 62
VE LF G +QV V+++++ WG+ LPAH V++ GT Y+ + T+ D++QM+G A
Sbjct: 461 VEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRA 520
Query: 61 TRPLLDNSGKCMIL 20
RP D+ G+ +I+
Sbjct: 521 GRPQYDSYGEGIII 534
>ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|222869248|gb|EEF06379.1|
predicted protein [Populus trichocarpa]
Length = 2157
Score = 145 bits (367), Expect(2) = 2e-37
Identities = 68/90 (75%), Positives = 76/90 (84%), Gaps = 3/90 (3%)
Frame = -1
Query: 262 DSLTSVD---VEHLFDAGWIQVCVASSSMCWGMALPAHLVVVMGTLYYDGRENIHTDYPV 92
+ L+S+D V LF+AGWIQVCV SSSMCWG+ L AHLVVVMGT YYDG+EN HTDYPV
Sbjct: 1633 EGLSSLDQEVVSQLFEAGWIQVCVMSSSMCWGVPLSAHLVVVMGTQYYDGQENAHTDYPV 1692
Query: 91 ADLLQMMGHATRPLLDNSGKCMILCHAPWK 2
DLLQMMGHA+RPLLDNSGKC+I CHAP K
Sbjct: 1693 TDLLQMMGHASRPLLDNSGKCVIFCHAPRK 1722
Score = 35.0 bits (79), Expect(2) = 2e-37
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 371 DSGERPXXXXXXXXXXEPSISKVKESMLSSTLQHGVG 261
D GE+P EP I K++E ML +TL HG+G
Sbjct: 1593 DGGEKPPFLLRSIEELEPFIGKIQEEMLRATLHHGIG 1629
Score = 63.9 bits (154), Expect = 1e-08
Identities = 29/74 (39%), Positives = 48/74 (64%)
Frame = -1
Query: 241 VEHLFDAGWIQVCVASSSMCWGMALPAHLVVVMGTLYYDGRENIHTDYPVADLLQMMGHA 62
VE LF G +QV V+++++ WG+ LPAH V++ GT Y+ + T+ D++QM+G A
Sbjct: 801 VEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRA 860
Query: 61 TRPLLDNSGKCMIL 20
RP D+ G+ +I+
Sbjct: 861 GRPQYDSYGEGIII 874
>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
vinifera]
Length = 2177
Score = 150 bits (379), Expect = 1e-34
Identities = 83/152 (54%), Positives = 94/152 (61%), Gaps = 15/152 (9%)
Frame = -1
Query: 412 VPTSKHAMLTAVMLIVERDPCFY*NERKNWSLPFPKSKSPC*APLSS------------M 269
VPT KH LTAV L E + L P+ P +
Sbjct: 1596 VPTRKHVRLTAVDLTTYSSADG--GENPTFLLRSPEELEPFVGKIQEEMLRATLRHGVGY 1653
Query: 268 VWDSLTSVD---VEHLFDAGWIQVCVASSSMCWGMALPAHLVVVMGTLYYDGRENIHTDY 98
+ + LT +D V LF+AGWIQVCV SSS+CWG+ L AHLVVVMGT YYDGREN HTDY
Sbjct: 1654 LHEGLTGMDQEVVSQLFEAGWIQVCVMSSSLCWGVPLSAHLVVVMGTQYYDGRENAHTDY 1713
Query: 97 PVADLLQMMGHATRPLLDNSGKCMILCHAPWK 2
PV DLLQMMGHA+RPLLDNSGKC+ILCHAP K
Sbjct: 1714 PVTDLLQMMGHASRPLLDNSGKCVILCHAPRK 1745
Score = 64.3 bits (155), Expect = 1e-08
Identities = 29/74 (39%), Positives = 48/74 (64%)
Frame = -1
Query: 241 VEHLFDAGWIQVCVASSSMCWGMALPAHLVVVMGTLYYDGRENIHTDYPVADLLQMMGHA 62
VE LF G +QV V+++++ WG+ LPAH V++ GT Y+ + T+ D++QM+G A
Sbjct: 828 VEELFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRA 887
Query: 61 TRPLLDNSGKCMIL 20
RP D+ G+ +I+
Sbjct: 888 GRPQYDSYGEGIII 901
>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
Length = 2144
Score = 150 bits (379), Expect = 1e-34
Identities = 83/152 (54%), Positives = 94/152 (61%), Gaps = 15/152 (9%)
Frame = -1
Query: 412 VPTSKHAMLTAVMLIVERDPCFY*NERKNWSLPFPKSKSPC*APLSS------------M 269
VPT KH LTAV L E + L P+ P +
Sbjct: 1563 VPTRKHVRLTAVDLTTYSSADG--GENPTFLLRSPEELEPFVGKIQEEMLRATLRHGVGY 1620
Query: 268 VWDSLTSVD---VEHLFDAGWIQVCVASSSMCWGMALPAHLVVVMGTLYYDGRENIHTDY 98
+ + LT +D V LF+AGWIQVCV SSS+CWG+ L AHLVVVMGT YYDGREN HTDY
Sbjct: 1621 LHEGLTGMDQEVVSQLFEAGWIQVCVMSSSLCWGVPLSAHLVVVMGTQYYDGRENAHTDY 1680
Query: 97 PVADLLQMMGHATRPLLDNSGKCMILCHAPWK 2
PV DLLQMMGHA+RPLLDNSGKC+ILCHAP K
Sbjct: 1681 PVTDLLQMMGHASRPLLDNSGKCVILCHAPRK 1712
Score = 64.3 bits (155), Expect = 1e-08
Identities = 29/74 (39%), Positives = 48/74 (64%)
Frame = -1
Query: 241 VEHLFDAGWIQVCVASSSMCWGMALPAHLVVVMGTLYYDGRENIHTDYPVADLLQMMGHA 62
VE LF G +QV V+++++ WG+ LPAH V++ GT Y+ + T+ D++QM+G A
Sbjct: 795 VEELFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRA 854
Query: 61 TRPLLDNSGKCMIL 20
RP D+ G+ +I+
Sbjct: 855 GRPQYDSYGEGIII 868
>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
200 kDa helicase-like [Cucumis sativus]
Length = 2175
Score = 149 bits (377), Expect = 2e-34
Identities = 85/156 (54%), Positives = 94/156 (60%), Gaps = 19/156 (12%)
Frame = -1
Query: 412 VPTSKHAMLTAVMLIVERDPCFY*NERKNWSLPFPKSKSPC*APLSSMVWD--------- 260
VPT KH LTAV D Y + LPF P + D
Sbjct: 1594 VPTRKHVRLTAV------DIMTYSSADNGEKLPFLLRSLEDIEPFVDKINDEMLKAILRH 1647
Query: 259 -------SLTSVD---VEHLFDAGWIQVCVASSSMCWGMALPAHLVVVMGTLYYDGRENI 110
L+S+D V LF+AGWIQVCV SSSMCWG+ L AHLVVVMGT YYDGREN
Sbjct: 1648 GVGYLHEGLSSLDQEVVTQLFEAGWIQVCVISSSMCWGVPLSAHLVVVMGTQYYDGRENA 1707
Query: 109 HTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPWK 2
HTDYPV DL+QMMGHA+RPLLDNSGKC+ILCHAP K
Sbjct: 1708 HTDYPVTDLMQMMGHASRPLLDNSGKCVILCHAPRK 1743
Score = 65.5 bits (158), Expect = 4e-09
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Frame = -1
Query: 256 LTSVD---VEHLFDAGWIQVCVASSSMCWGMALPAHLVVVMGTLYYDGRENIHTDYPVAD 86
+T VD VE LF G IQV V+++++ WG+ LPAH V++ GT Y+ + T+ D
Sbjct: 818 MTRVDRQLVEDLFADGHIQVLVSTATLAWGVNLPAHCVIIKGTQIYNPEKGAWTELSPLD 877
Query: 85 LLQMMGHATRPLLDNSGKCMIL 20
++QM+G A RP D+ G +I+
Sbjct: 878 VMQMLGRAGRPQFDSEGTGIII 899