BLASTX nr result

ID: Papaver23_contig00020034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00020034
         (1536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    58   8e-06

>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1715

 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 41/154 (26%), Positives = 76/154 (49%)
 Frame = -2

Query: 968 GQIRRQSKNFFIFRCFDWDSYNYVLEEGLWSFEGYLAVFREWSTSVILEILDFHIHRFWI 789
           G+I +  +  FIF     +S + VL  G WSF   + V   W+  +   +L+F    FWI
Sbjct: 70  GRIIQNRRFQFIFP--SEESLDTVLRRGPWSFADRMLVVERWTPDMDPLVLNFI--PFWI 125

Query: 788 DIKKLPPEFLNVEVENQIASILGNPLKLIPEDGNPTDTNVVSVLIEFNISNPMLRGLLNK 609
            ++++P +FLN+EV + IA  LG    +  +    T    V + I++++++P+      +
Sbjct: 126 QVREIPLQFLNLEVIDNIAGSLGERKAVDFDPFTTTRVEFVRIQIKWDVNHPLRFQRNYQ 185

Query: 608 NAAKVKQWVPIYFQRQQFFLCPTCLILDHNELQC 507
            +  V   +  Y++R + F C  C  + H+   C
Sbjct: 186 FSLGVNTVLSFYYERLRGF-CDVCGRMTHDAGSC 218


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