BLASTX nr result

ID: Papaver23_contig00019971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019971
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|35548...    62   4e-08
ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncat...    62   4e-08
ref|XP_003611119.1| F-box family protein [Medicago truncatula] g...    61   8e-08
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    60   1e-07
ref|XP_003611132.1| S-locus F-box protein [Medicago truncatula] ...    60   2e-07

>ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|355487558|gb|AES68761.1|
           F-box protein [Medicago truncatula]
          Length = 382

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
 Frame = -3

Query: 277 EFYNFAGTCNGLVCLNGCYDNEWKFNYEPVYIC-NPITREFMYLPKFNRKPDRSERLVTG 101
           +FY F G+CNG+VC+    DNE    Y  + IC NP TR+F  LP F +       +  G
Sbjct: 117 KFYRFIGSCNGIVCIA---DNE----YTSLVICWNPSTRKFKELPLFEKPMTGVNVMTFG 169

Query: 100 FGYVSSSNEYKVIRMYN---LEKDP---NSIRVEVYTLG 2
           FGY SS + YKV+ +     L++D    N  +V+V+TLG
Sbjct: 170 FGYDSSKDNYKVVVVLEYLVLDEDDSFFNKTQVKVHTLG 208


>ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487555|gb|AES68758.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 382

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/99 (41%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
 Frame = -3

Query: 277 EFYNFAGTCNGLVCLNGCYDNEWKFNYEPVYIC-NPITREFMYLPKFNRKPDRSERLVTG 101
           +FY F G+CNG+VCL    DNE    Y  + IC NP TR+F  LP F +       +  G
Sbjct: 117 KFYRFIGSCNGIVCLA---DNE----YTSLVICWNPSTRKFKELPLFEKPTTGLNVMTFG 169

Query: 100 FGYVSSSNEYKVIRMYN---LEKD---PNSIRVEVYTLG 2
           FGY SS + YKV+ + +   L++D    N  +V V+TLG
Sbjct: 170 FGYDSSKDNYKVVVVLDYQFLDEDYSFVNKTQVMVHTLG 208


>ref|XP_003611119.1| F-box family protein [Medicago truncatula]
           gi|355512454|gb|AES94077.1| F-box family protein
           [Medicago truncatula]
          Length = 560

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
 Frame = -3

Query: 271 YNFAGTCNGLVCLNGCYDNEWKFNYEPVYICNPITREFMYLPKFNRKPD--RSERLVTGF 98
           +    +CNGL+CL+            P+ ICNP+TREF  LP+     D   S R+  GF
Sbjct: 259 FGIVNSCNGLLCLSETSIGS------PLVICNPVTREFTILPELTTTSDWFNSARVQAGF 312

Query: 97  GYVSSSNEYKVIRMYN--LEKDP----NSIRVEVYTLG 2
           G+   +NEYKVI M+N  + +D       + +E++TLG
Sbjct: 313 GFQPKTNEYKVIIMWNKYVRRDNRLVFERVVLEIHTLG 350


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 4/114 (3%)
 Frame = -3

Query: 385 CTYRLFHFLEFYDKNFSSEEQPFHRVTRMKLNPAPFEF----YNFAGTCNGLVCLNGCYD 218
           C + + + L F D  F++ E+   +V R++   APF      +   G+CNGL+CL+    
Sbjct: 84  CDFPIRNNLYFVD--FAAHEEEKEKVKRIR---APFSSMMPEFEVVGSCNGLLCLSDSLF 138

Query: 217 NEWKFNYEPVYICNPITREFMYLPKFNRKPDRSERLVTGFGYVSSSNEYKVIRM 56
           N      + +YI NP T  +  LPK  + PD  + +V GFG+   +NEYKVIR+
Sbjct: 139 N------DSLYIYNPFTGRYKELPKSLQYPD--QEVVFGFGFNPKTNEYKVIRI 184


>ref|XP_003611132.1| S-locus F-box protein [Medicago truncatula]
           gi|355512467|gb|AES94090.1| S-locus F-box protein
           [Medicago truncatula]
          Length = 464

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
 Frame = -3

Query: 271 YNFAGTCNGLVCLNGCYDNEWKFNYEPVYICNPITREFMYLPKFNRKPD--RSERLVTGF 98
           +    +CNGL+CL+            P+ ICNP+TREF  LP+     D   S R+  GF
Sbjct: 132 FGIVNSCNGLLCLSETSTGS------PLAICNPVTREFTILPELTTTSDWFNSARVQAGF 185

Query: 97  GYVSSSNEYKVIRMYN 50
           G+   +NEYKVI M+N
Sbjct: 186 GFQPKTNEYKVIIMWN 201


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