BLASTX nr result
ID: Papaver23_contig00019857
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00019857
(674 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001041883.1| Os01g0123000 [Oryza sativa Japonica Group] g... 122 6e-26
emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group] 112 9e-23
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 107 2e-21
gb|ACN32036.1| unknown [Zea mays] 106 4e-21
gb|AAK53860.1|AC016781_14 Putative retroelement [Oryza sativa Ja... 106 4e-21
>ref|NP_001041883.1| Os01g0123000 [Oryza sativa Japonica Group]
gi|113531414|dbj|BAF03797.1| Os01g0123000 [Oryza sativa
Japonica Group] gi|215741345|dbj|BAG97840.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 360
Score = 122 bits (306), Expect = 6e-26
Identities = 73/212 (34%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Frame = +1
Query: 7 DKILLGWLFSSLSAPILAKVRGCTSSATAWTKIDELLASKSEANILAIRRELQHIQKGNR 186
D+ +LG+LFSSLS IL++V G T++A AW I ++ ASKS A ++ +R L QKG
Sbjct: 87 DQQVLGFLFSSLSREILSQVAGATTAAQAWQAISDMFASKSRAGLINMRLALTSTQKGTM 146
Query: 187 SITEYLAHANQLADSLASGGHPISDMELRHILLDGLDSLFETIYAFLQTSMDRFTVETFE 366
S+TEY+A +AD LA+ G PI +L +++GLD+ F+ + L ++ TV+
Sbjct: 147 SVTEYVAKMRAIADELAAAGKPIDQDDLIAYIINGLDANFDPVVEALVARVEPITVQEMY 206
Query: 367 THLLSYERRIDKHNKSLMQPQANAVKFSSNRGKVSSPNTGVSP----------------- 495
+HLL++E +I L Q A ++NR V+ G P
Sbjct: 207 SHLLNFENKI-----RLRQAFLTASTNAANRNNVTRGGRGGMPRGRGGRGGGGRGGNGGR 261
Query: 496 -----------VICQLCEKPHHIAQDCWKRFD 558
CQ+C K H+A DCW RFD
Sbjct: 262 GNNGGGRGDNRPTCQVCNKRGHVASDCWHRFD 293
>emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]
Length = 1825
Score = 112 bits (279), Expect = 9e-23
Identities = 66/210 (31%), Positives = 105/210 (50%), Gaps = 26/210 (12%)
Frame = +1
Query: 7 DKILLGWLFSSLSAPILAKVRGCTSSATAWTKIDELLASKSEANILAIRRELQHIQKGNR 186
D+ +LG+LFSSL+ L +V ++A AW +D++ S++ A L +R L +QKGN
Sbjct: 219 DQQILGFLFSSLTRETLLQVAAVKTAAEAWKTLDDMFTSRTRARSLNVRLALTTLQKGNS 278
Query: 187 SITEYLAHANQLADSLASGGHPISDMELRHILLDGLDSLFETIYAFLQTSMDRFTVETFE 366
SI+EY+ LAD +A+ G P+ D EL +L+GLD F+++ + + ++ TV
Sbjct: 279 SISEYIGKMKTLADEVAAAGKPLDDEELIAYILNGLDEDFDSVVSTIVGRVEPVTVAEVY 338
Query: 367 THLLSYERRIDKHNKSLMQPQAN----------AVKFSSNRGKVSSPNTGVSP------- 495
+ LLS+E R+ AN + RG+ ++ G +P
Sbjct: 339 SQLLSFENRLAMRQAQATANMANRGGRGGGGSRGGGANPGRGRGATRGRGAAPGRGRGNN 398
Query: 496 ---------VICQLCEKPHHIAQDCWKRFD 558
+CQ+C K H+A DCW RFD
Sbjct: 399 QQQRSYDNRPLCQVCYKRGHVAADCWHRFD 428
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 107 bits (268), Expect = 2e-21
Identities = 73/219 (33%), Positives = 98/219 (44%), Gaps = 35/219 (15%)
Frame = +1
Query: 7 DKILLGWLFSSLSAPILAKVRGCTSSATAWTKIDELLASKSEANILAIRRELQHIQKGNR 186
D+ +LG+L SSLS +L+ V C++SA+ WT + E+ +S S A + R L +KG
Sbjct: 82 DQAVLGYLLSSLSREVLSSVVNCSTSASVWTTLSEMYSSHSRARKVNTRIALATTKKGAS 141
Query: 187 SITEYLAHANQLADSLASGGHPISDMELRHILLDGLDSLFETIYAFLQTSMDRFTVETFE 366
S+ EY A AD L + G P+ D E LL GLD F + + D T
Sbjct: 142 SVAEYFAKMRGFADELGAAGKPLDDEEFVSFLLTGLDEDFNPLVTAVVARSDPITPGDLY 201
Query: 367 THLLSYERR--IDKHNKSLMQPQANAVK--------------FSSNRGKVSSPNTG---- 486
T LLSYE R + + SLMQ ANA FS RG+ P+ G
Sbjct: 202 TQLLSYENRMHLQTGSSSLMQSSANARSPGRGMSWGRSGGRGFSRGRGRGRGPSRGGFQS 261
Query: 487 ---------------VSPVICQLCEKPHHIAQDCWKRFD 558
S CQ+C + H A +CW RFD
Sbjct: 262 FGRGNNYSGATDADTSSRPRCQVCSRVGHTALNCWYRFD 300
>gb|ACN32036.1| unknown [Zea mays]
Length = 376
Score = 106 bits (265), Expect = 4e-21
Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
Frame = +1
Query: 4 EDKILLGWLFSSLSAPILAKVRGCTSSATAWTKIDELLASKSEANILAIRRELQHIQKGN 183
+D+++L + SSLS +LA V T++ AW+ ++ + AS S A I+ IR +L IQKG+
Sbjct: 91 QDQLVLSVINSSLSEEVLATVVDATTARGAWSTLERMYASSSRARIMQIRMQLATIQKGD 150
Query: 184 RSITEYLAHANQLADSLASGGHPISDMELRHILLDGLDSLFETIYAFLQTSMDRFTVETF 363
+ EY +LAD+LA+ G + D E LL GL + ++++ + T D +T+
Sbjct: 151 LTAAEYFRKVKRLADTLAAVGKRLEDEEFISYLLRGLPADYDSLVTSITTRPDTYTISDV 210
Query: 364 ETHLLSYERRIDKH---------NKSLMQPQANAVKFSSN------RGKVSSP------- 477
HLLS+E R + H N + P F N RG S P
Sbjct: 211 YAHLLSFETRQEYHTAVGQISSVNNANRVPSRGGGAFGQNGRGGRGRGGRSQPGRGNNRP 270
Query: 478 ------NTGVSPVICQLCEKPHHIAQDCWKRFD 558
N S CQ+C K +H A CW RFD
Sbjct: 271 PARPPSNNSSSSGTCQICGKGNHNALQCWHRFD 303
>gb|AAK53860.1|AC016781_14 Putative retroelement [Oryza sativa Japonica Group]
Length = 1096
Score = 106 bits (265), Expect = 4e-21
Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 18/203 (8%)
Frame = +1
Query: 4 EDKILLGWLFSSLSAPILAKVRGCTSSATAWTKIDELLASKSEANILAIRRELQHIQKGN 183
+D+ +LG+LFSSLS IL +V G ++A AW I+++ + KS+A + + L QKG
Sbjct: 80 QDQQVLGFLFSSLSREILQQVAGAQTTAQAWNMINDIFSCKSKAGAINVLLALTTTQKGP 139
Query: 184 RSITEYLAHANQLADSLASGGHPISDMELRHILLDGLDSLFETIYAFLQ--TSMDRFTVE 357
SI+EY+A L D +A+ G + D EL +++GLDS F+ L T + +
Sbjct: 140 MSISEYIAKMRSLGDEMAAAGKLLDDEELIAYIINGLDSDFDAAVEGLMATTRIAPLLIS 199
Query: 358 TFETHLLSYERRIDKHNKSLMQPQANAV-----------KFSSNRGKVSSPNTG-----V 489
+ LLSYE RI ++ + AN + RG NTG
Sbjct: 200 HVYSQLLSYENRI-SIRQTYLPTSANTANRGGRGGRGGNRGRGGRGGAGGANTGRGRGND 258
Query: 490 SPVICQLCEKPHHIAQDCWKRFD 558
+ +CQ C K HIA DCW R+D
Sbjct: 259 THPVCQACHKRGHIASDCWHRYD 281