BLASTX nr result

ID: Papaver23_contig00019857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019857
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001041883.1| Os01g0123000 [Oryza sativa Japonica Group] g...   122   6e-26
emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]                112   9e-23
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   107   2e-21
gb|ACN32036.1| unknown [Zea mays]                                     106   4e-21
gb|AAK53860.1|AC016781_14 Putative retroelement [Oryza sativa Ja...   106   4e-21

>ref|NP_001041883.1| Os01g0123000 [Oryza sativa Japonica Group]
           gi|113531414|dbj|BAF03797.1| Os01g0123000 [Oryza sativa
           Japonica Group] gi|215741345|dbj|BAG97840.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 360

 Score =  122 bits (306), Expect = 6e-26
 Identities = 73/212 (34%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
 Frame = +1

Query: 7   DKILLGWLFSSLSAPILAKVRGCTSSATAWTKIDELLASKSEANILAIRRELQHIQKGNR 186
           D+ +LG+LFSSLS  IL++V G T++A AW  I ++ ASKS A ++ +R  L   QKG  
Sbjct: 87  DQQVLGFLFSSLSREILSQVAGATTAAQAWQAISDMFASKSRAGLINMRLALTSTQKGTM 146

Query: 187 SITEYLAHANQLADSLASGGHPISDMELRHILLDGLDSLFETIYAFLQTSMDRFTVETFE 366
           S+TEY+A    +AD LA+ G PI   +L   +++GLD+ F+ +   L   ++  TV+   
Sbjct: 147 SVTEYVAKMRAIADELAAAGKPIDQDDLIAYIINGLDANFDPVVEALVARVEPITVQEMY 206

Query: 367 THLLSYERRIDKHNKSLMQPQANAVKFSSNRGKVSSPNTGVSP----------------- 495
           +HLL++E +I      L Q    A   ++NR  V+    G  P                 
Sbjct: 207 SHLLNFENKI-----RLRQAFLTASTNAANRNNVTRGGRGGMPRGRGGRGGGGRGGNGGR 261

Query: 496 -----------VICQLCEKPHHIAQDCWKRFD 558
                        CQ+C K  H+A DCW RFD
Sbjct: 262 GNNGGGRGDNRPTCQVCNKRGHVASDCWHRFD 293


>emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]
          Length = 1825

 Score =  112 bits (279), Expect = 9e-23
 Identities = 66/210 (31%), Positives = 105/210 (50%), Gaps = 26/210 (12%)
 Frame = +1

Query: 7   DKILLGWLFSSLSAPILAKVRGCTSSATAWTKIDELLASKSEANILAIRRELQHIQKGNR 186
           D+ +LG+LFSSL+   L +V    ++A AW  +D++  S++ A  L +R  L  +QKGN 
Sbjct: 219 DQQILGFLFSSLTRETLLQVAAVKTAAEAWKTLDDMFTSRTRARSLNVRLALTTLQKGNS 278

Query: 187 SITEYLAHANQLADSLASGGHPISDMELRHILLDGLDSLFETIYAFLQTSMDRFTVETFE 366
           SI+EY+     LAD +A+ G P+ D EL   +L+GLD  F+++ + +   ++  TV    
Sbjct: 279 SISEYIGKMKTLADEVAAAGKPLDDEELIAYILNGLDEDFDSVVSTIVGRVEPVTVAEVY 338

Query: 367 THLLSYERRIDKHNKSLMQPQAN----------AVKFSSNRGKVSSPNTGVSP------- 495
           + LLS+E R+           AN              +  RG+ ++   G +P       
Sbjct: 339 SQLLSFENRLAMRQAQATANMANRGGRGGGGSRGGGANPGRGRGATRGRGAAPGRGRGNN 398

Query: 496 ---------VICQLCEKPHHIAQDCWKRFD 558
                     +CQ+C K  H+A DCW RFD
Sbjct: 399 QQQRSYDNRPLCQVCYKRGHVAADCWHRFD 428


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
           gi|531389|gb|AAA57005.1| copia-like retrotransposon
           Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  107 bits (268), Expect = 2e-21
 Identities = 73/219 (33%), Positives = 98/219 (44%), Gaps = 35/219 (15%)
 Frame = +1

Query: 7   DKILLGWLFSSLSAPILAKVRGCTSSATAWTKIDELLASKSEANILAIRRELQHIQKGNR 186
           D+ +LG+L SSLS  +L+ V  C++SA+ WT + E+ +S S A  +  R  L   +KG  
Sbjct: 82  DQAVLGYLLSSLSREVLSSVVNCSTSASVWTTLSEMYSSHSRARKVNTRIALATTKKGAS 141

Query: 187 SITEYLAHANQLADSLASGGHPISDMELRHILLDGLDSLFETIYAFLQTSMDRFTVETFE 366
           S+ EY A     AD L + G P+ D E    LL GLD  F  +   +    D  T     
Sbjct: 142 SVAEYFAKMRGFADELGAAGKPLDDEEFVSFLLTGLDEDFNPLVTAVVARSDPITPGDLY 201

Query: 367 THLLSYERR--IDKHNKSLMQPQANAVK--------------FSSNRGKVSSPNTG---- 486
           T LLSYE R  +   + SLMQ  ANA                FS  RG+   P+ G    
Sbjct: 202 TQLLSYENRMHLQTGSSSLMQSSANARSPGRGMSWGRSGGRGFSRGRGRGRGPSRGGFQS 261

Query: 487 ---------------VSPVICQLCEKPHHIAQDCWKRFD 558
                           S   CQ+C +  H A +CW RFD
Sbjct: 262 FGRGNNYSGATDADTSSRPRCQVCSRVGHTALNCWYRFD 300


>gb|ACN32036.1| unknown [Zea mays]
          Length = 376

 Score =  106 bits (265), Expect = 4e-21
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
 Frame = +1

Query: 4   EDKILLGWLFSSLSAPILAKVRGCTSSATAWTKIDELLASKSEANILAIRRELQHIQKGN 183
           +D+++L  + SSLS  +LA V   T++  AW+ ++ + AS S A I+ IR +L  IQKG+
Sbjct: 91  QDQLVLSVINSSLSEEVLATVVDATTARGAWSTLERMYASSSRARIMQIRMQLATIQKGD 150

Query: 184 RSITEYLAHANQLADSLASGGHPISDMELRHILLDGLDSLFETIYAFLQTSMDRFTVETF 363
            +  EY     +LAD+LA+ G  + D E    LL GL + ++++   + T  D +T+   
Sbjct: 151 LTAAEYFRKVKRLADTLAAVGKRLEDEEFISYLLRGLPADYDSLVTSITTRPDTYTISDV 210

Query: 364 ETHLLSYERRIDKH---------NKSLMQPQANAVKFSSN------RGKVSSP------- 477
             HLLS+E R + H         N +   P      F  N      RG  S P       
Sbjct: 211 YAHLLSFETRQEYHTAVGQISSVNNANRVPSRGGGAFGQNGRGGRGRGGRSQPGRGNNRP 270

Query: 478 ------NTGVSPVICQLCEKPHHIAQDCWKRFD 558
                 N   S   CQ+C K +H A  CW RFD
Sbjct: 271 PARPPSNNSSSSGTCQICGKGNHNALQCWHRFD 303


>gb|AAK53860.1|AC016781_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1096

 Score =  106 bits (265), Expect = 4e-21
 Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 18/203 (8%)
 Frame = +1

Query: 4   EDKILLGWLFSSLSAPILAKVRGCTSSATAWTKIDELLASKSEANILAIRRELQHIQKGN 183
           +D+ +LG+LFSSLS  IL +V G  ++A AW  I+++ + KS+A  + +   L   QKG 
Sbjct: 80  QDQQVLGFLFSSLSREILQQVAGAQTTAQAWNMINDIFSCKSKAGAINVLLALTTTQKGP 139

Query: 184 RSITEYLAHANQLADSLASGGHPISDMELRHILLDGLDSLFETIYAFLQ--TSMDRFTVE 357
            SI+EY+A    L D +A+ G  + D EL   +++GLDS F+     L   T +    + 
Sbjct: 140 MSISEYIAKMRSLGDEMAAAGKLLDDEELIAYIINGLDSDFDAAVEGLMATTRIAPLLIS 199

Query: 358 TFETHLLSYERRIDKHNKSLMQPQANAV-----------KFSSNRGKVSSPNTG-----V 489
              + LLSYE RI    ++ +   AN             +    RG     NTG      
Sbjct: 200 HVYSQLLSYENRI-SIRQTYLPTSANTANRGGRGGRGGNRGRGGRGGAGGANTGRGRGND 258

Query: 490 SPVICQLCEKPHHIAQDCWKRFD 558
           +  +CQ C K  HIA DCW R+D
Sbjct: 259 THPVCQACHKRGHIASDCWHRYD 281


Top