BLASTX nr result

ID: Papaver23_contig00019844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019844
         (1043 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    82   3e-13
emb|CAN83390.1| hypothetical protein VITISV_041404 [Vitis vinifera]    74   5e-11
gb|AFK37781.1| unknown [Lotus japonicus]                               74   6e-11
ref|XP_003612169.1| F-box family protein [Medicago truncatula] g...    71   4e-10
ref|XP_003619305.1| S locus F-box protein [Medicago truncatula] ...    69   2e-09

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 93/352 (26%), Positives = 143/352 (40%), Gaps = 38/352 (10%)
 Frame = +1

Query: 7   CKKERKKIKVS---------MEKLPLEITENVLTRLPVVSKLQCREVCTTLRNLLPKPKM 159
           C+K RK+ K           ME LP EI  ++L+RLP+ S +Q + VC   R L+  P++
Sbjct: 5   CEKHRKRRKTKVEYDPQTTGMELLPREIAHDILSRLPITSLVQFKCVCRAWRALVQDPQL 64

Query: 160 GLLYMVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDKFSSSNHVDEDDRV 339
             LY+                                             + H +E ++V
Sbjct: 65  VDLYLSCSTQDTDHPCLILHCDFPIRNNLYFVDF----------------AAHEEEKEKV 108

Query: 340 SCLGTLTKLDQRIIMPSTCYLRTF-IVGSCKGLVCYASHIRKRTSERKVYICNPVTGEQI 516
                     +RI  P +  +  F +VGSC GL+C +  +   +    +YI NP TG   
Sbjct: 109 ----------KRIPAPFSSMMPEFEVVGSCNGLLCLSDSLYNDS----LYIYNPFTGCYK 154

Query: 517 QLPVISKWVENPDAEQGIGFGYNPSSKEYKVVRIMSRMVYVYTLQGGVLSKHK------- 675
           +LP   K ++ PD E   GFG+NP +KEYKV+RI    VY     GG     +       
Sbjct: 155 ELP---KSLQYPDQEVVSGFGFNPKTKEYKVIRI----VYYRNGHGGYPRSRRIIYPLSE 207

Query: 676 ---FSIGN---QALSRPSN--VLPSVGVFARGALHWI-----ESVESMIVTFDLENERFE 816
               ++G    ++L + S   V  + G    G LHWI           +V+FDL +E+F 
Sbjct: 208 VQILTLGCPEWRSLGKVSYRLVRRASGALVNGRLHWISRPCRNKPARRLVSFDLTDEQFR 267

Query: 817 LLSGIPSELCDTNHVELMELGGNLCV--------LEVFPSKHVTIWESSFRE 948
            +S       +  +  L+ L G L          LE++  K   + ES  +E
Sbjct: 268 EVSKPDCGGLNRCNYHLVVLRGCLSAAVYCNYGRLEIWVMKEYNVKESWVKE 319


>emb|CAN83390.1| hypothetical protein VITISV_041404 [Vitis vinifera]
          Length = 322

 Score = 74.3 bits (181), Expect = 5e-11
 Identities = 52/188 (27%), Positives = 100/188 (53%), Gaps = 17/188 (9%)
 Frame = +1

Query: 421 SCKGLVCYASHIRKRTSERKVYICNPVTGEQIQLP---VISKWVENPDAEQGIGFGYNPS 591
           SC GL+C+     K   E +  + NP+ GE + LP   V+S+W   P  ++  G G++ S
Sbjct: 55  SCHGLLCFV----KCGKEEEALVSNPLRGELLMLPESTVMSRW---PHLDR-YGLGFDSS 106

Query: 592 SKEYKVVRIMSRMVYVYTLQGGVLSKHKFSIGNQALSRPSNVLPSV-----GVFARGALH 756
            K+YK+V +  R  + +  +G  L    +++G  +  R  + +P        V+A GALH
Sbjct: 107 IKKYKIVHVFFR-DFDWAKRGYRLGAEVYTVGTTSSWREISQIPCYPLYKRAVYASGALH 165

Query: 757 WI-------ESVESMIVTFDLENERFELL--SGIPSELCDTNHVELMELGGNLCVLEVFP 909
           W+       ++++SM+++F++++E F  +     PS++  +   EL++L G L +++   
Sbjct: 166 WLVNYEFNPDNLKSMVISFNIKDEEFNSIPHQEFPSKV--SKWFELVDLRGYLGMVDFSL 223

Query: 910 SKHVTIWE 933
             H+ IW+
Sbjct: 224 GTHIEIWK 231


>gb|AFK37781.1| unknown [Lotus japonicus]
          Length = 489

 Score = 73.9 bits (180), Expect = 6e-11
 Identities = 71/227 (31%), Positives = 105/227 (46%), Gaps = 21/227 (9%)
 Frame = +1

Query: 412  IVGSCKGLVCYASHIRKRTSERKVYI-CNPVTGEQIQLPVISKWVE-NPDAEQGI--GFG 579
            +V SC GL+C          ER  ++ CNP+TGE I+LP  S+  + N  + Q I  GFG
Sbjct: 177  VVNSCNGLICLCDR------ERDYFVVCNPITGEFIRLPQTSRIGKTNKFSIQEIYAGFG 230

Query: 580  YNPSSKEYKVVRIMSRMVYVYTLQGGVLSKHKFSIGNQALSRPSNVLPSVGVF------- 738
            + P + EYKVVRI+  + + +    G+++    ++G    S   NV  +   F       
Sbjct: 231  FQPKNNEYKVVRILRGLQFYH----GIMAAEVHTLGT---STWRNVEVNSMYFYHLRFPT 283

Query: 739  -ARGALHWIESVES--MIVTFDLENERFELLSGIPS--ELCDTNHVELMELGGNLCVLEV 903
               GALHWI S      I+ FD E+ERF      P   + C T  + + EL G+L + + 
Sbjct: 284  CVSGALHWIGSYHGTLSILCFDFESERFRSFPTPPCLYQSC-TESITMGELRGSLYICDS 342

Query: 904  F-PSKHVTIW---ESSFRETRRRFVSTWRTVFRLE-WEDYSWFEPFG 1029
            F       +W   E  F+E       +W  +F  +    Y W  PFG
Sbjct: 343  FSKGTPFVMWIMKEYGFKE-------SWTKIFSFDTMSSYRW--PFG 380


>ref|XP_003612169.1| F-box family protein [Medicago truncatula]
           gi|355513504|gb|AES95127.1| F-box family protein
           [Medicago truncatula]
          Length = 1154

 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 83/332 (25%), Positives = 122/332 (36%), Gaps = 36/332 (10%)
 Frame = +1

Query: 43  EKLPLEITENVLTRLPVVSKLQCREVCTTLRNLLPKPKMGLLYMVSXXXXXXXXXXXXXX 222
           + LP  I  ++L  LP+ S L C  VC   + L+ +P    L                  
Sbjct: 48  DNLPSHIIAHMLLHLPIKSLLICECVCKIWKTLISEPHFAKLNF------------ERSQ 95

Query: 223 XXXXXXXXXXXXXXXXXXXXXXDDDKFSSSNHVDEDDRVSC-------LGTLTKLDQRII 381
                                 D +KF     +  + RV         L       ++I 
Sbjct: 96  VCLMIRIDDCRLVSRTMYLLECDPEKFQ----IGSNSRVKLAPIFKLPLRNANSYKEKIE 151

Query: 382 MPSTCYLRTF-----IVGSCKGLVCYASHIRKRTSERKVYICNPVTGEQIQLP-VISKWV 543
               C +R +     +V SC GL+C    +R     R + ICNPVTGE I+LP   +  +
Sbjct: 152 NKPKCPIRPYYDKFGVVNSCNGLLC----LRHPFEGRPLVICNPVTGEFIRLPKATANLI 207

Query: 544 ENP--DAEQGI-GFGYNPSSKEYKVVRIMSRMVYVYTLQGGVLSKHKFSIGNQALS--RP 708
            N   D   GI  FG+ P + EYKV+ I  +  YV    G V       I        R 
Sbjct: 208 HNDIVDKVSGIAAFGFQPKTNEYKVMYIWDK--YVRRGNGWVFDHIVLEINTLGTPSWRN 265

Query: 709 SNVLPSVGV----------FARGALHWI--ESVESMIVTFDLENERFELLSGIPSELCDT 852
           + V P + +          +  GALHWI  E  E  I+ F  E+ER +     P      
Sbjct: 266 AEVDPQISIGSGLSLHYPTYVNGALHWIRFEDEERSILCFCFESERLQSFPSPPVFQNQN 325

Query: 853 N------HVELMELGGNLCVLEVFPSKHVTIW 930
           N       + + EL G L + + +  + V +W
Sbjct: 326 NGFRRNERIRMGELRGLLYICDTYSFRDVAMW 357



 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 26/199 (13%)
 Frame = +1

Query: 412  IVGSCKGLVCYASHIRKRTSERKVYICNPVTGEQIQLP---VISKWVENPDAEQG-IGFG 579
            +  SC GL+C        + E  + ICNPVTGE I+LP   + +    +P   +G +GFG
Sbjct: 854  VANSCNGLLCLCCP----SDEHPLSICNPVTGEFIKLPEATINTHDERSPLNMRGQVGFG 909

Query: 580  YNPSSKEYKVVRI------------MSRMVY-VYTLQGGVLSKHKFSIGNQALSRPSNVL 720
            + P + EYKV+RI              RMV  +YTL  G  S     +  Q +S  SN+ 
Sbjct: 910  FQPKTNEYKVIRIWGSDVKRGNRWVFDRMVLEIYTL--GTPSWRNAEVDPQ-ISIGSNIW 966

Query: 721  PSVGVFARGALHWI--ESVESMIVTFDLENERFELLSGIPSELCDTNH-------VELME 873
                    G +HWI  +  E  I+ F LENER +     P  L + N+       + + E
Sbjct: 967  LRYPTCVNGTIHWIRFKGQERSILCFCLENERLQSFPS-PPVLQNQNNGFRHNECIRIGE 1025

Query: 874  LGGNLCVLEVFPSKHVTIW 930
            L G L + +    + V +W
Sbjct: 1026 LRGLLYICDTSFFRDVAMW 1044


>ref|XP_003619305.1| S locus F-box protein [Medicago truncatula]
            gi|355494320|gb|AES75523.1| S locus F-box protein
            [Medicago truncatula]
          Length = 471

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 82/341 (24%), Positives = 126/341 (36%), Gaps = 47/341 (13%)
 Frame = +1

Query: 49   LPLEITENVLTRLPVVSKLQCREVCTTLRNLLPKPKMGLLYMVSXXXXXXXXXXXXXXXX 228
            LP  +T ++L +LP+ S L C+ VC   + ++ +     L+                   
Sbjct: 39   LPSHLTAHILLQLPIKSLLICKCVCKIWKRMISESHFAKLHFEQSPISLMIRTRYYKRVS 98

Query: 229  XXXXXXXXXXXXXXXXXXXXDDDKFS--SSNHVDEDD--RVSCLGTLTKLDQRIIMPSTC 396
                                D +KF   S+NHV+ +   R+   G +  L  +       
Sbjct: 99   RTLYLLEC------------DPEKFEIGSNNHVNLEPIFRLPLRGDVKSLGMKSDKIKNK 146

Query: 397  YLRTFIVG-----------SCKGLVCYASHIRKRTSERKVYICNPVTGEQIQLPVISKWV 543
            Y   +I G           SC GL+C    + + T+   + ICNP  GE I+LP  +  V
Sbjct: 147  YKHVYIAGNSDRDKFNIVNSCNGLLC----LSEPTTGNPIVICNPFMGEFIRLPETTT-V 201

Query: 544  ENPDAE-----QGIGFGYNPSSKEYKVVRIMSRMVYVYTLQGGVLSKHKFSIGNQALSRP 708
              P+       Q  GFG+ P + EYKV+ I  R V           +H F +    L  P
Sbjct: 202  RMPNDRVHVIGQEAGFGFYPKTNEYKVIHIWRRSVIHVNSSD---FEHVFLVEIHTLGTP 258

Query: 709  S----NVLPSVG-------VFARGALHW--IESVESMIVTFDLENERFELLSGIP----- 834
            +    NV P +            GALHW   E  E  I+ F  E+E+       P     
Sbjct: 259  TWRNINVDPQISFSCLMNPTCVNGALHWFTFEGREMSILCFCFESEKLHSFPSPPVVIGS 318

Query: 835  ---------SELCDTNHVELMELGGNLCVLEVFPSKHVTIW 930
                       L    H+ + EL G L + +    ++VT+W
Sbjct: 319  HLQDQIDKYGYLSGIIHISMGELKGFLYISDSNFFEYVTMW 359


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