BLASTX nr result

ID: Papaver23_contig00019752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019752
         (1132 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003580029.1| PREDICTED: ribosome-recycling factor-like [B...   256   6e-66
ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis ...   253   6e-65
emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera]   253   6e-65
dbj|BAK05150.1| predicted protein [Hordeum vulgare subsp. vulgare]    251   2e-64
ref|XP_002298606.1| predicted protein [Populus trichocarpa] gi|2...   249   9e-64

>ref|XP_003580029.1| PREDICTED: ribosome-recycling factor-like [Brachypodium distachyon]
          Length = 261

 Score =  256 bits (655), Expect = 6e-66
 Identities = 128/211 (60%), Positives = 164/211 (77%), Gaps = 1/211 (0%)
 Frame = +3

Query: 234 YLKECRRGFAXXXXXXXXXXXXTAEVV-DIGPSLKANTSALMEAAQVALSKEMSQLRTNR 410
           +L E RRGFA            T E V DIGP++K+  +A ME A VALS+E+S+LRT R
Sbjct: 50  FLFEARRGFAKGKKSKNDSRGDTVEAVPDIGPTVKSTATAQMETAVVALSRELSKLRTGR 109

Query: 411 ASTGLVDHLLIETSSGKISLNRVCAVSVLDAQTISISPYDPKTLMKPVENALRESPLGIN 590
           AS G++DH+++ET+  K+ LNR+  VSVLDA T+S+ PYDP + MK +ENA+  SPLGIN
Sbjct: 110 ASPGMLDHIMVETADTKVGLNRIAVVSVLDAHTLSVMPYDPSS-MKSIENAIVSSPLGIN 168

Query: 591 PKVDGDRLIVPIPPMTKETMQAMCKVVAKAGEDVKLSIRRARQKAIDTIKQASSSMPKDD 770
           P  DG+R+I PIPP+TKE +QA+CKVV K+ ED K SIRRARQKA+DTIK++SSSMPKDD
Sbjct: 169 PTPDGNRIIAPIPPLTKENIQALCKVVTKSAEDFKQSIRRARQKALDTIKKSSSSMPKDD 228

Query: 771 LKRLEKEIDEMNKKYSKSTEDMCKAKEKEIN 863
           +KRLEKE++EM KK+ KS +DMCKAKEKEI+
Sbjct: 229 IKRLEKEVEEMTKKFIKSADDMCKAKEKEIS 259


>ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis vinifera]
           gi|296090242|emb|CBI40061.3| unnamed protein product
           [Vitis vinifera]
          Length = 258

 Score =  253 bits (646), Expect = 6e-65
 Identities = 134/227 (59%), Positives = 169/227 (74%), Gaps = 1/227 (0%)
 Frame = +3

Query: 183 SLFGIHHLESSNQSGLDYLKECRRGFAXXXXXXXXXXXXTAEVV-DIGPSLKANTSALME 359
           +L G   L  S  S LD+L+E RRGFA            T EVV DIGP++K N  + M+
Sbjct: 30  NLTGSPSLNPSASSALDFLRESRRGFAKGRKSKDSDAGNTVEVVPDIGPAVKENAMSQMD 89

Query: 360 AAQVALSKEMSQLRTNRASTGLVDHLLIETSSGKISLNRVCAVSVLDAQTISISPYDPKT 539
           AA VALS+E+S+LRT RAS G++DH+++ET   K+ L+R+  VSVLD +T+S++PYD   
Sbjct: 90  AAVVALSRELSKLRTGRASAGMLDHIIVETGGVKMPLSRLAVVSVLDPKTLSVTPYDLDA 149

Query: 540 LMKPVENALRESPLGINPKVDGDRLIVPIPPMTKETMQAMCKVVAKAGEDVKLSIRRARQ 719
           L K +ENA+  SPLG+NPK DG+RLI  IPP+TKE +QAMCKVVAK+ EDVK SIRRARQ
Sbjct: 150 L-KQLENAIVSSPLGLNPKADGERLIAVIPPLTKEHIQAMCKVVAKSCEDVKQSIRRARQ 208

Query: 720 KAIDTIKQASSSMPKDDLKRLEKEIDEMNKKYSKSTEDMCKAKEKEI 860
           KA+D IK+A SS+PKD  KRLEKE+DE+ KK+ KS EDMCKAKEKEI
Sbjct: 209 KALDMIKKAGSSLPKDVAKRLEKEVDELTKKFVKSAEDMCKAKEKEI 255


>emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera]
          Length = 258

 Score =  253 bits (646), Expect = 6e-65
 Identities = 134/227 (59%), Positives = 169/227 (74%), Gaps = 1/227 (0%)
 Frame = +3

Query: 183 SLFGIHHLESSNQSGLDYLKECRRGFAXXXXXXXXXXXXTAEVV-DIGPSLKANTSALME 359
           +L G   L  S  S LD+L+E RRGFA            T EVV DIGP++K N  + M+
Sbjct: 30  NLTGSPSLNPSASSALDFLRESRRGFAKGRKSKDSDAGNTVEVVPDIGPAVKENAMSQMD 89

Query: 360 AAQVALSKEMSQLRTNRASTGLVDHLLIETSSGKISLNRVCAVSVLDAQTISISPYDPKT 539
           AA VALS+E+S+LRT RAS G++DH+++ET   K+ L+R+  VSVLD +T+S++PYD   
Sbjct: 90  AAVVALSRELSKLRTGRASAGMLDHIIVETGGVKMPLSRLAVVSVLDPKTLSVTPYDLDA 149

Query: 540 LMKPVENALRESPLGINPKVDGDRLIVPIPPMTKETMQAMCKVVAKAGEDVKLSIRRARQ 719
           L K +ENA+  SPLG+NPK DG+RLI  IPP+TKE +QAMCKVVAK+ EDVK SIRRARQ
Sbjct: 150 L-KQLENAIVSSPLGLNPKADGERLIAVIPPLTKEHIQAMCKVVAKSCEDVKQSIRRARQ 208

Query: 720 KAIDTIKQASSSMPKDDLKRLEKEIDEMNKKYSKSTEDMCKAKEKEI 860
           KA+D IK+A SS+PKD  KRLEKE+DE+ KK+ KS EDMCKAKEKEI
Sbjct: 209 KALDXIKKAGSSLPKDVAKRLEKEVDELTKKFVKSAEDMCKAKEKEI 255


>dbj|BAK05150.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 260

 Score =  251 bits (641), Expect = 2e-64
 Identities = 125/211 (59%), Positives = 161/211 (76%), Gaps = 1/211 (0%)
 Frame = +3

Query: 234 YLKECRRGFAXXXXXXXXXXXXTAEVV-DIGPSLKANTSALMEAAQVALSKEMSQLRTNR 410
           +L E RRGFA            T E   DIGP++K+  +A M+ A VALS+E+S+LRT R
Sbjct: 49  FLLEIRRGFAKGKKSKNDSRGDTVEAAPDIGPTVKSAATAQMDTAVVALSRELSKLRTGR 108

Query: 411 ASTGLVDHLLIETSSGKISLNRVCAVSVLDAQTISISPYDPKTLMKPVENALRESPLGIN 590
           AS G++DH+++ET   K+ L+R+  VSVLD+ T+S+ PYDP T MK +ENA+  SPLGIN
Sbjct: 109 ASPGMLDHIMVETGDVKVGLSRIAVVSVLDSHTLSVMPYDPNT-MKSIENAIASSPLGIN 167

Query: 591 PKVDGDRLIVPIPPMTKETMQAMCKVVAKAGEDVKLSIRRARQKAIDTIKQASSSMPKDD 770
           P  DG R+I  +PP+TKETMQAMCKVV K+ ED K SIRRARQKA+DTIK++SSSMPKDD
Sbjct: 168 PTPDGSRIIAAVPPLTKETMQAMCKVVTKSAEDFKQSIRRARQKALDTIKKSSSSMPKDD 227

Query: 771 LKRLEKEIDEMNKKYSKSTEDMCKAKEKEIN 863
           +KRLEKE++E+ KK+ KS +DMCKAKEKEI+
Sbjct: 228 IKRLEKEVEELTKKFIKSADDMCKAKEKEIS 258


>ref|XP_002298606.1| predicted protein [Populus trichocarpa] gi|222845864|gb|EEE83411.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  249 bits (636), Expect = 9e-64
 Identities = 128/224 (57%), Positives = 164/224 (73%), Gaps = 1/224 (0%)
 Frame = +3

Query: 198 HHLESSNQSGLDYLKECRRGFAXXXXXXXXXXXX-TAEVVDIGPSLKANTSALMEAAQVA 374
           H L S+     D+LK+ RRGFA             T E VDIGP++K   ++ M+AA VA
Sbjct: 50  HKLPSATLPSFDFLKQSRRGFAKGKNKSKDDSAGGTVEFVDIGPTVKETANSQMDAAVVA 109

Query: 375 LSKEMSQLRTNRASTGLVDHLLIETSSGKISLNRVCAVSVLDAQTISISPYDPKTLMKPV 554
           LS+E+ +LRT RAS G++DH+++ET   K+ LNR   VSV+DA+T+S++PYDP TL K +
Sbjct: 110 LSRELQKLRTGRASAGMLDHIIVETDGVKLPLNRSAVVSVMDAKTLSVNPYDPNTL-KQL 168

Query: 555 ENALRESPLGINPKVDGDRLIVPIPPMTKETMQAMCKVVAKAGEDVKLSIRRARQKAIDT 734
           ENA+  SPLG+NP+ DGDRLI  IPP+TKE  QAMCKVVAK+ ED + SIRRARQKA+DT
Sbjct: 169 ENAIVSSPLGLNPQRDGDRLIAAIPPLTKEHTQAMCKVVAKSCEDCRQSIRRARQKAMDT 228

Query: 735 IKQASSSMPKDDLKRLEKEIDEMNKKYSKSTEDMCKAKEKEINS 866
           +K+A SS PKDD K+LEKEI+EM KK+ KS EDMC  KEKEI +
Sbjct: 229 VKKAGSSFPKDDAKKLEKEIEEMTKKFVKSAEDMCNNKEKEIKT 272


Top