BLASTX nr result

ID: Papaver23_contig00019749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019749
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Sh...    65   7e-09
pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimi...    62   4e-08
ref|XP_002981870.1| hypothetical protein SELMODRAFT_115640 [Sela...    61   8e-08
ref|XP_002981961.1| hypothetical protein SELMODRAFT_115594 [Sela...    59   5e-07
emb|CCI55310.1| PH01B001I13.6 [Phyllostachys edulis]                   58   9e-07

>sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Short=AMP1; AltName:
           Full=MiAMP1; Flags: Precursor gi|2181943|emb|CAA71842.1|
           AMP1 [Macadamia integrifolia]
          Length = 102

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = +2

Query: 86  TDFANAYKFTVWRGPGCTGPSKVY-QCGCHNLKYHGGFYFEYLGPIARVYKGSGCRGRYL 262
           ++  N   FTVW GPGC   ++ Y +CGC  +   GG+ F Y G  A +Y  +GC G   
Sbjct: 21  SEMVNGSAFTVWSGPGCNNRAERYSKCGCSAIHQKGGYDFSYTGQTAALYNQAGCSGVAH 80

Query: 263 ATFRSNHRKCGAFPYGSMQIFC 328
             F S+ R C  F + S+ I C
Sbjct: 81  TRFGSSARACNPFGWKSIFIQC 102


>pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimicrobial
           Protein
          Length = 76

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
 Frame = +2

Query: 110 FTVWRGPGCTGPSKVY-QCGCHNLKYHGGFYFEYLGPIARVYKGSGCRGRYLATFRSNHR 286
           FTVW GPGC   ++ Y +CGC  +   GG+ F Y G  A +Y  +GC G     F S+ R
Sbjct: 3   FTVWSGPGCNNRAERYSKCGCSAIHQKGGYDFSYTGQTAALYNQAGCSGVAHTRFGSSAR 62

Query: 287 KCGAFPYGSMQIFC 328
            C  F + S+ I C
Sbjct: 63  ACNPFGWKSIFIQC 76


>ref|XP_002981870.1| hypothetical protein SELMODRAFT_115640 [Selaginella moellendorffii]
           gi|300150312|gb|EFJ16963.1| hypothetical protein
           SELMODRAFT_115640 [Selaginella moellendorffii]
          Length = 84

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
 Frame = +2

Query: 95  ANAYKFTVWRGPGCTGPSKVYQ-CGCHNL--KYHGGFYFEYLGPIARVYKGSGCRGRYLA 265
           ANA  F  W GPGC    + Y+ CGC+N+    HGG+ F Y G  A  Y  + CRG    
Sbjct: 4   ANASFFDAWAGPGCNNRLERYRACGCNNVGASQHGGYSFAYQGQTAAAYNTANCRGVAHT 63

Query: 266 TFRSNHRKCGAFPYGSMQIFC 328
            F S+ + C  F + S+ I C
Sbjct: 64  RFSSSVQDCSGFGWRSIFIQC 84


>ref|XP_002981961.1| hypothetical protein SELMODRAFT_115594 [Selaginella moellendorffii]
           gi|300150403|gb|EFJ17054.1| hypothetical protein
           SELMODRAFT_115594 [Selaginella moellendorffii]
          Length = 84

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/81 (38%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
 Frame = +2

Query: 95  ANAYKFTVWRGPGCTGPSKVYQ-CGCHNLK--YHGGFYFEYLGPIARVYKGSGCRGRYLA 265
           ANA  F  W GPGC    + Y  CGC N++   HGG+ F Y G  A  Y  + CRG    
Sbjct: 4   ANASFFDAWAGPGCNNVLERYSACGCTNVRASQHGGYSFVYQGQTAAAYNTANCRGVAHT 63

Query: 266 TFRSNHRKCGAFPYGSMQIFC 328
            F  + + C  F + S  I C
Sbjct: 64  RFSRSVQDCSGFGWNSFFIQC 84


>emb|CCI55310.1| PH01B001I13.6 [Phyllostachys edulis]
          Length = 102

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
 Frame = +2

Query: 113 TVWRGPGCTGP----SKVYQCGCHNLKYHGGFYFEYLGPIARVYKGSGCRGRYLATFRSN 280
           T W GPGCT      S V  CGC+++++HGG  F + G  A +Y   GC G     F   
Sbjct: 28  TSWGGPGCTTSKGHMSSVGSCGCNHIRFHGGHEFNFRGEKATLYTKPGCAGTPYQVFEDT 87

Query: 281 HRKCGAFPYGSMQIFC 328
            + CG F + S+ I C
Sbjct: 88  -QACGDFGWHSIHIDC 102


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