BLASTX nr result

ID: Papaver23_contig00019712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019712
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...    82   6e-14
ref|XP_003613721.1| F-box/LRR-repeat protein [Medicago truncatul...    77   1e-12
ref|NP_198675.2| FBD-associated F-box protein [Arabidopsis thali...    77   2e-12
ref|NP_974861.1| FBD-associated F-box protein [Arabidopsis thali...    77   2e-12
ref|XP_003571062.1| PREDICTED: F-box/LRR-repeat protein At4g1409...    75   6e-12

>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 467

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 52/165 (31%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
 Frame = +1

Query: 7   RVNRWFRTVMKRKVEELVLSMTPKEP-FIFPLSFFTCVSLVVLDLEYTHILNLPNTISFP 183
           +V+    + +   V +L L++  +   F+ P SF    SL  LD+ +  + ++P+ I FP
Sbjct: 112 KVSSMLSSALMHDVHDLTLNLESENSRFVLPNSFSASRSLTKLDIVFGFLDSVPDGICFP 171

Query: 184 RIKILRLAYITFVNENLTGELFSNCPILEELSLFQCDFEDFKVLCIMSPTLKCLSI--RK 357
            +KIL  A++TF NE     LFS CP+L++LS  +C + +  +  +  PTLK L I  R 
Sbjct: 172 SLKILSFAHVTFTNEKSAQRLFSGCPVLQDLSFEKCYWVNINI-SVAIPTLKKLDIFFRS 230

Query: 358 CRLFHQT--LKVFAPNLLTIKYAAEMPADFVLDSFQSLVEADIEI 486
             L   +   K+ A NLL++ Y +    +  L +  S+V+A+I++
Sbjct: 231 SSLDRNSCMFKIDAVNLLSLSYKSNPTINCFLVNSTSIVDANIDL 275


>ref|XP_003613721.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355515056|gb|AES96679.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 703

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 8/168 (4%)
 Frame = +1

Query: 7   RVNRWFRTVMKRKVEELVLSMTPK-EPFIFPLSFFTCVSLVVLDLEYTHILNLPNTISFP 183
           + N    + +  K+ +L LS+      F+ P +F    SL  L LE+  IL +P+ I FP
Sbjct: 122 KANSLLSSALMHKLLDLKLSLDHTFARFVLPNNFSASQSLNKLCLEFGFILYIPDGIRFP 181

Query: 184 RIKILRLAYITFVNENLTGELFSNCPILEELSLFQCDFEDFKVLCIMSPTLKCLSIR--- 354
            +K L L++++F NE     L S CP+L+EL+L++  + + + + +   TL+ L+I    
Sbjct: 182 NLKTLYLSHLSFANEKSAQRLLSGCPVLQELTLYKFFWLNIEQINVAISTLRKLTIELNH 241

Query: 355 ----KCRLFHQTLKVFAPNLLTIKYAAEMPADFVLDSFQSLVEADIEI 486
                 R+   T+K    NLL++ Y A     FVL +  S+V+A I++
Sbjct: 242 FDPSDLRIRSFTIKFDVANLLSLSYTAHPIIKFVLVNPTSIVDACIDL 289


>ref|NP_198675.2| FBD-associated F-box protein [Arabidopsis thaliana]
           gi|33589724|gb|AAQ22628.1| At5g38590/MBB18_14
           [Arabidopsis thaliana] gi|332006956|gb|AED94339.1|
           FBD-associated F-box protein [Arabidopsis thaliana]
          Length = 289

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/114 (35%), Positives = 63/114 (55%)
 Frame = +1

Query: 10  VNRWFRTVMKRKVEELVLSMTPKEPFIFPLSFFTCVSLVVLDLEYTHILNLPNTISFPRI 189
           + RW    + R V +L +    +   IF  SFF C SLV L L    + ++P+ +  P +
Sbjct: 92  IRRWIEIAVSRHVHDLDIDHFSENENIFLSSFFACKSLVTLKLRSVTLRDIPSMVCLPSL 151

Query: 190 KILRLAYITFVNENLTGELFSNCPILEELSLFQCDFEDFKVLCIMSPTLKCLSI 351
           K L L  ++FV      EL S CP+LE+LS++  D+E+ K L I+ P+L  LS+
Sbjct: 152 KTLLLDNVSFVEGKSLQELLSICPVLEDLSVYCDDYENTKELTIVVPSLLSLSL 205


>ref|NP_974861.1| FBD-associated F-box protein [Arabidopsis thaliana]
           gi|75262402|sp|Q9FFW2.1|FBD17_ARATH RecName:
           Full=FBD-associated F-box protein At5g38590
           gi|10176827|dbj|BAB10149.1| unnamed protein product
           [Arabidopsis thaliana] gi|332006955|gb|AED94338.1|
           FBD-associated F-box protein [Arabidopsis thaliana]
          Length = 410

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/114 (35%), Positives = 63/114 (55%)
 Frame = +1

Query: 10  VNRWFRTVMKRKVEELVLSMTPKEPFIFPLSFFTCVSLVVLDLEYTHILNLPNTISFPRI 189
           + RW    + R V +L +    +   IF  SFF C SLV L L    + ++P+ +  P +
Sbjct: 92  IRRWIEIAVSRHVHDLDIDHFSENENIFLSSFFACKSLVTLKLRSVTLRDIPSMVCLPSL 151

Query: 190 KILRLAYITFVNENLTGELFSNCPILEELSLFQCDFEDFKVLCIMSPTLKCLSI 351
           K L L  ++FV      EL S CP+LE+LS++  D+E+ K L I+ P+L  LS+
Sbjct: 152 KTLLLDNVSFVEGKSLQELLSICPVLEDLSVYCDDYENTKELTIVVPSLLSLSL 205


>ref|XP_003571062.1| PREDICTED: F-box/LRR-repeat protein At4g14096-like [Brachypodium
           distachyon]
          Length = 416

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
 Frame = +1

Query: 16  RWFRTVMKRKVEELVLSMTPKE-----PFIFPLSFFTCVSLVVLDLEYTHILNL---PNT 171
           RW R VM R V  L++++          +  P   F C ++  +DL  T    L   P +
Sbjct: 102 RWLRHVMSRGVRVLMITLHSSSYRGLSGWELPDCVFNCATVETIDLSVTSPWELVISPKS 161

Query: 172 ISFPRIKILRLAYITFVNENLTGELFSNCPILEELSLFQCDFEDFKVLCIMSPTLKCLSI 351
           +  PR+K LRL Y+   + ++  +L S CP LE L L +C     +   I S TLK LSI
Sbjct: 162 VCLPRLKKLRLDYVNLSDSSVVEKLNSGCPALEHLDLARCGLAQSR---ISSDTLKILSI 218

Query: 352 RKCRLFHQTLKVFAPNLLTIKYAAEMPADFVLDSFQSLVEADIEI 486
             C   ++ + +FAPN+++++    +     LDS  SL+ A + I
Sbjct: 219 TACA--YEEIHIFAPNVVSLR--LNVAGRVKLDSMPSLMSAWVNI 259


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