BLASTX nr result

ID: Papaver23_contig00019701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019701
         (1117 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267068.1| PREDICTED: protein SHORT-ROOT-like isoform 1...   403   e-110
emb|CAN75901.1| hypothetical protein VITISV_001968 [Vitis vinifera]   403   e-110
ref|XP_003632486.1| PREDICTED: protein SHORT-ROOT-like isoform 2...   396   e-108
dbj|BAF91723.1| putative SHORT-ROOT protein [Ipomoea nil]             395   e-108
gb|AET37154.1| GRAS family transcription factor, partial [Quercu...   395   e-107

>ref|XP_002267068.1| PREDICTED: protein SHORT-ROOT-like isoform 1 [Vitis vinifera]
          Length = 494

 Score =  403 bits (1035), Expect = e-110
 Identities = 222/368 (60%), Positives = 258/368 (70%), Gaps = 7/368 (1%)
 Frame = -3

Query: 1085 MDTLFRLVSLQQSDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHCYQNYTSIQEEEC 906
            MDTLFRLVSLQ SDQ                               H +Q     ++EEC
Sbjct: 1    MDTLFRLVSLQ-SDQSYNSSRTSSSSRSSRQNHH------------HHHQ-----EDEEC 42

Query: 905  SNFFMDEDNFSSSSSAKQHLYPSPSSAYXXXXXXXXXXXXXXXHENQF----INYQNQQP 738
             NFFMDE++FSSSSS  +H YP     +                 + F     ++   + 
Sbjct: 43   FNFFMDEEDFSSSSS--KHYYPYQQQTHPSTTTTPTTTNTSTPTHHAFEPTEFSFSPARD 100

Query: 737  IXXXXXXXXXXSKWSCNLLVEAARAIADRNKERVQQLMWMLNELSSPYGDTDQKLASYFL 558
            +           KW+  +L+E ARAIAD+N  RVQQLMWMLNELSSPYGDTDQKLA+YFL
Sbjct: 101  LHLEFNSSASG-KWASEILLETARAIADKNSARVQQLMWMLNELSSPYGDTDQKLAAYFL 159

Query: 557  QALFCRMTDSGERCYRTLRSASEKTCSFESTRKVVLKFQEVSPWTTFGHVASNGAIMEAF 378
            QALF RMTDSGERCYRTL SASEKTCSFESTRK+VLKFQEVSPWTTFGHVA NGAIMEA 
Sbjct: 160  QALFSRMTDSGERCYRTLISASEKTCSFESTRKMVLKFQEVSPWTTFGHVACNGAIMEAL 219

Query: 377  EGEAKLHIIDISNTYCTQWPTLLEALATRTDDTPHLRLTTIISSAVGT---AAVQRVMKE 207
            EGE+KLHIIDISNTYCTQWPTLLEALATRTD+TPHLRLTT+++S  GT   A VQ++MKE
Sbjct: 220  EGESKLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVTSKAGTGGMAPVQKLMKE 279

Query: 206  IGTRMEKFARLMGVPFKFNVIHHSGDLSELSFIPELDLKDDEALAINCNGTLHTIGDVGN 27
            IG RMEKFARLMGVPFKFNV+HHSGDLS L+ + ELD+KDDEALA+NC G LH++   GN
Sbjct: 280  IGNRMEKFARLMGVPFKFNVLHHSGDLSHLN-LAELDIKDDEALAVNCVGALHSVTAFGN 338

Query: 26   QRNTVLSA 3
            +R+ V+S+
Sbjct: 339  RRDIVVSS 346


>emb|CAN75901.1| hypothetical protein VITISV_001968 [Vitis vinifera]
          Length = 480

 Score =  403 bits (1035), Expect = e-110
 Identities = 222/364 (60%), Positives = 255/364 (70%), Gaps = 3/364 (0%)
 Frame = -3

Query: 1085 MDTLFRLVSLQQSDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHCYQNYTSIQEEEC 906
            MDTLFRLVSLQ SDQ                               H +Q     ++EEC
Sbjct: 1    MDTLFRLVSLQ-SDQSYNSSRTSSSSRSSRQNHH------------HHHQ-----EDEEC 42

Query: 905  SNFFMDEDNFSSSSSAKQHLYPSPSSAYXXXXXXXXXXXXXXXHENQFINYQNQQPIXXX 726
             NFFMDE++FSSSSS  +H YP     +                        +  P+   
Sbjct: 43   FNFFMDEEDFSSSSS--KHYYPYQQQTHPSSPPPPPPPTPALLLIMPLSPPNSLSPLP-- 98

Query: 725  XXXXXXXSKWSCNLLVEAARAIADRNKERVQQLMWMLNELSSPYGDTDQKLASYFLQALF 546
                     W+  +L+E ARAIAD+N  RVQQLMWMLNELSSPYGDTDQKLA+YFLQALF
Sbjct: 99   ---------WASEILLETARAIADKNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALF 149

Query: 545  CRMTDSGERCYRTLRSASEKTCSFESTRKVVLKFQEVSPWTTFGHVASNGAIMEAFEGEA 366
             RMTDSGERCYRTL SASEKTCSFESTRK+VLKFQEVSPWTTFGHVA NGAIMEA EGE+
Sbjct: 150  SRMTDSGERCYRTLISASEKTCSFESTRKMVLKFQEVSPWTTFGHVACNGAIMEALEGES 209

Query: 365  KLHIIDISNTYCTQWPTLLEALATRTDDTPHLRLTTIISSAVGT---AAVQRVMKEIGTR 195
            KLHIIDISNTYCTQWPTLLEALATRTD+TPHLRLTT+++S  GT   A VQ++MKEIG R
Sbjct: 210  KLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVTSKAGTGGMAPVQKLMKEIGNR 269

Query: 194  MEKFARLMGVPFKFNVIHHSGDLSELSFIPELDLKDDEALAINCNGTLHTIGDVGNQRNT 15
            MEKFARLMGVPFKFNV+HHSGDLS L+ + ELD+KDDEALA+NC G LH++  VGN+R+ 
Sbjct: 270  MEKFARLMGVPFKFNVLHHSGDLSHLN-LAELDIKDDEALAVNCVGALHSVTAVGNRRDI 328

Query: 14   VLSA 3
            V+S+
Sbjct: 329  VVSS 332


>ref|XP_003632486.1| PREDICTED: protein SHORT-ROOT-like isoform 2 [Vitis vinifera]
          Length = 509

 Score =  396 bits (1018), Expect = e-108
 Identities = 224/382 (58%), Positives = 261/382 (68%), Gaps = 21/382 (5%)
 Frame = -3

Query: 1085 MDTLFRLVSLQQSDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHCYQNYTSIQEEEC 906
            MDTLFRLVSLQ SDQ                               H +Q     ++EEC
Sbjct: 1    MDTLFRLVSLQ-SDQSYNSSRTSSSSRSSRQNHH------------HHHQ-----EDEEC 42

Query: 905  SNFFMDEDNFSSSSSA-----KQHLYPS-------------PSSAYXXXXXXXXXXXXXX 780
             NFFMDE++FSSSSS      +Q  +PS             PS+                
Sbjct: 43   FNFFMDEEDFSSSSSKHYYPYQQQTHPSTTTTPTTTNTQTHPSTTTTPTTTNTSTPTHHA 102

Query: 779  XHENQFINYQNQQPIXXXXXXXXXXSKWSCNLLVEAARAIADRNKERVQQLMWMLNELSS 600
                +F ++   + +           KW+  +L+E ARAIAD+N  RVQQLMWMLNELSS
Sbjct: 103  FEPTEF-SFSPARDLHLEFNSSASG-KWASEILLETARAIADKNSARVQQLMWMLNELSS 160

Query: 599  PYGDTDQKLASYFLQALFCRMTDSGERCYRTLRSASEKTCSFESTRKVVLKFQEVSPWTT 420
            PYGDTDQKLA+YFLQALF RMTDSGERCYRTL SASEKTCSFESTRK+VLKFQEVSPWTT
Sbjct: 161  PYGDTDQKLAAYFLQALFSRMTDSGERCYRTLISASEKTCSFESTRKMVLKFQEVSPWTT 220

Query: 419  FGHVASNGAIMEAFEGEAKLHIIDISNTYCTQWPTLLEALATRTDDTPHLRLTTIISSAV 240
            FGHVA NGAIMEA EGE+KLHIIDISNTYCTQWPTLLEALATRTD+TPHLRLTT+++S  
Sbjct: 221  FGHVACNGAIMEALEGESKLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVTSKA 280

Query: 239  GT---AAVQRVMKEIGTRMEKFARLMGVPFKFNVIHHSGDLSELSFIPELDLKDDEALAI 69
            GT   A VQ++MKEIG RMEKFARLMGVPFKFNV+HHSGDLS L+ + ELD+KDDEALA+
Sbjct: 281  GTGGMAPVQKLMKEIGNRMEKFARLMGVPFKFNVLHHSGDLSHLN-LAELDIKDDEALAV 339

Query: 68   NCNGTLHTIGDVGNQRNTVLSA 3
            NC G LH++   GN+R+ V+S+
Sbjct: 340  NCVGALHSVTAFGNRRDIVVSS 361


>dbj|BAF91723.1| putative SHORT-ROOT protein [Ipomoea nil]
          Length = 505

 Score =  395 bits (1016), Expect = e-108
 Identities = 219/374 (58%), Positives = 257/374 (68%), Gaps = 14/374 (3%)
 Frame = -3

Query: 1085 MDTLFRLVSLQQSDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHCYQNYTSIQE-EE 909
            MDTLFRLVSLQQSDQ                                 + NY   QE EE
Sbjct: 1    MDTLFRLVSLQQSDQSFNSSRTSSSSRCSR------------------HNNYHHHQEDEE 42

Query: 908  CSNFFMDEDNFSSSSSAKQHLYPSPSSAYXXXXXXXXXXXXXXXHENQFI----NYQNQQ 741
            C NFFMDED+FSSSSS  +H YP  SS+Y                         +Y + Q
Sbjct: 43   CFNFFMDEDDFSSSSS--KHPYPPSSSSYHHHHHQYQQFSNTPTPTTTSSTPPHSYSHPQ 100

Query: 740  PIXXXXXXXXXXS--KWSCNLLVEAARAIADRNKERVQQLMWMLNELSSPYGDTDQKLAS 567
            P              KW+  +LVE ARA+A++N  RVQQLMWMLNELSSPYGDTDQKLA+
Sbjct: 101  PTFDPNLEFGSAFSGKWATEILVETARAVAEKNSGRVQQLMWMLNELSSPYGDTDQKLAA 160

Query: 566  YFLQALFCRMTDSGERCYRTLRSASEKTCSFESTRKVVLKFQEVSPWTTFGHVASNGAIM 387
            YFLQALF RMTD+G+R YR+L SAS+KTCSFESTRK+VLKFQEVSPWTTFGHVA NGAIM
Sbjct: 161  YFLQALFSRMTDTGDRTYRSLVSASDKTCSFESTRKMVLKFQEVSPWTTFGHVACNGAIM 220

Query: 386  EAFEGEAKLHIIDISNTYCTQWPTLLEALATRTDDTPHLRLTTII-------SSAVGTAA 228
            EAFEGE+KLHI+DISNT+CTQWPTLLEALATRTD+TPHLRLTT++         + G A+
Sbjct: 221  EAFEGESKLHIVDISNTFCTQWPTLLEALATRTDETPHLRLTTVVVNKAFGGGGSGGAAS 280

Query: 227  VQRVMKEIGTRMEKFARLMGVPFKFNVIHHSGDLSELSFIPELDLKDDEALAINCNGTLH 48
            +Q+VMKEIG RMEKF RLMGVPFKFNVIHHSGDLS+L  +  LD+K+DEALAIN  G LH
Sbjct: 281  IQKVMKEIGNRMEKFGRLMGVPFKFNVIHHSGDLSDLD-LSALDIKEDEALAINSVGALH 339

Query: 47   TIGDVGNQRNTVLS 6
            ++  VG++R+ ++S
Sbjct: 340  SVTAVGSRRDYLIS 353


>gb|AET37154.1| GRAS family transcription factor, partial [Quercus suber]
          Length = 477

 Score =  395 bits (1014), Expect = e-107
 Identities = 221/368 (60%), Positives = 250/368 (67%), Gaps = 8/368 (2%)
 Frame = -3

Query: 1085 MDTLFRLVSLQQSDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHCYQNYTSIQE-EE 909
            MDTLFRLVSLQ SDQ                                  QN+   QE EE
Sbjct: 1    MDTLFRLVSLQ-SDQSFNSSRTSSSSRSSR-------------------QNHHYPQEDEE 40

Query: 908  CSNFFMDEDNFSSSSSAKQHLY-----PSPSSAYXXXXXXXXXXXXXXXHENQF-INYQN 747
            C NFFMDE++FSSSSS   + Y     P+PS+                     F  N++ 
Sbjct: 41   CFNFFMDEEDFSSSSSRHYYPYHQQQQPNPSTTTTPTLTPTTTTNTNISTPTDFDFNFEF 100

Query: 746  QQPIXXXXXXXXXXSKWSCNLLVEAARAIADRNKERVQQLMWMLNELSSPYGDTDQKLAS 567
                            W+   L+E A+AIAD+N  RVQQLMWMLNELSSPYGDTDQKLAS
Sbjct: 101  SS-------------NWAPEALLETAQAIADKNSNRVQQLMWMLNELSSPYGDTDQKLAS 147

Query: 566  YFLQALFCRMTDSGERCYRTLRSASEKTCSFESTRKVVLKFQEVSPWTTFGHVASNGAIM 387
            YFLQALF RMTDSGERCYRTL SAS+KTCSFESTRK VLKFQEVSPWTTFGHVA NGAI+
Sbjct: 148  YFLQALFSRMTDSGERCYRTLASASDKTCSFESTRKTVLKFQEVSPWTTFGHVACNGAIL 207

Query: 386  EAFEGEAKLHIIDISNTYCTQWPTLLEALATRTDDTPHLRLTTIISS-AVGTAAVQRVMK 210
            EA EGE KLHI+D SNTYCTQWPTLLEALATRTD+TPHLRLTT++++ + G AAVQ+VMK
Sbjct: 208  EALEGEPKLHIVDFSNTYCTQWPTLLEALATRTDETPHLRLTTVVATKSGGVAAVQKVMK 267

Query: 209  EIGTRMEKFARLMGVPFKFNVIHHSGDLSELSFIPELDLKDDEALAINCNGTLHTIGDVG 30
            EIG RMEKFARLMGVPFKFNVIHH GDLSE +   ELD+KDDEALAINC  TLH+   V 
Sbjct: 268  EIGNRMEKFARLMGVPFKFNVIHHVGDLSEFNLASELDIKDDEALAINCVNTLHSTTTVD 327

Query: 29   NQRNTVLS 6
            N+R+ ++S
Sbjct: 328  NRRDYLIS 335


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