BLASTX nr result

ID: Papaver23_contig00019640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019640
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327136.1| light-harvesting complex I protein Lhca5 [Po...   234   1e-59
gb|AAM65689.1| light-harvesting complex protein [Arabidopsis tha...   223   3e-56
ref|NP_175137.1| photosystem I light harvesting complex protein ...   222   4e-56
dbj|BAH19631.1| AT1G45474 [Arabidopsis thaliana]                      222   4e-56
gb|AFK43193.1| unknown [Lotus japonicus]                              222   5e-56

>ref|XP_002327136.1| light-harvesting complex I protein Lhca5 [Populus trichocarpa]
           gi|222835451|gb|EEE73886.1| light-harvesting complex I
           protein Lhca5 [Populus trichocarpa]
          Length = 266

 Score =  234 bits (597), Expect = 1e-59
 Identities = 112/139 (80%), Positives = 125/139 (89%)
 Frame = -2

Query: 636 PIWYEAGSVKFEFASTTTLIIVQFLLMGFVETKRYMDFVTPGSQAQYGTFFGIEAAFEGS 457
           P+WYEAG+VKFEFAST TLI+VQ LLMGF ETKRYMDFV+PGSQA+ G+FFG+E+A EG 
Sbjct: 128 PVWYEAGAVKFEFASTRTLIVVQLLLMGFAETKRYMDFVSPGSQAKEGSFFGLESALEGL 187

Query: 456 ENGYPGGPLFNPLGLARDAESARVWKLKEIKNGRLAMMAMLGIFVQANVTHAGPIDNLVK 277
           E GYPGGPL NPLGLARD E+A VWKLKEIKNGRLAM+AM+GIFVQA VTHAGPIDNL++
Sbjct: 188 EPGYPGGPLLNPLGLARDIENAHVWKLKEIKNGRLAMVAMVGIFVQAAVTHAGPIDNLIE 247

Query: 276 HLSNPLHATIIQTLAGSGS 220
           HLSNP H TIIQTLA SGS
Sbjct: 248 HLSNPWHRTIIQTLANSGS 266


>gb|AAM65689.1| light-harvesting complex protein [Arabidopsis thaliana]
          Length = 256

 Score =  223 bits (567), Expect = 3e-56
 Identities = 110/140 (78%), Positives = 122/140 (87%), Gaps = 1/140 (0%)
 Frame = -2

Query: 636 PIWYEAGSVKFEFASTTTLIIVQFLLMGFVETKRYMDFVTPGSQAQYGTFF-GIEAAFEG 460
           P+WYEAG+VKF+FAST TLI+VQFLLMGF ETKRYMDFV+PGSQA+ G+FF GIEAA EG
Sbjct: 117 PVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGIEAALEG 176

Query: 459 SENGYPGGPLFNPLGLARDAESARVWKLKEIKNGRLAMMAMLGIFVQANVTHAGPIDNLV 280
            E GYPGGPL NPLGLA+D ++A  WKLKEIKNGRLAMMAMLG FVQA+VTH GPIDNLV
Sbjct: 177 LEPGYPGGPLLNPLGLAKDVKNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLV 236

Query: 279 KHLSNPLHATIIQTLAGSGS 220
           +HLSNP H TIIQTL  S S
Sbjct: 237 EHLSNPWHXTIIQTLFTSTS 256


>ref|NP_175137.1| photosystem I light harvesting complex protein 5 [Arabidopsis
           thaliana] gi|30693978|ref|NP_849778.1| photosystem I
           light harvesting complex protein 5 [Arabidopsis
           thaliana] gi|12321000|gb|AAG50618.1|AC083835_3
           light-harvesting complex protein [Arabidopsis thaliana]
           gi|17063199|gb|AAL32974.1| At1g45474/F2G19.4
           [Arabidopsis thaliana] gi|19699116|gb|AAL90924.1|
           At1g45474/F2G19.4 [Arabidopsis thaliana]
           gi|62320735|dbj|BAD95402.1| light-harvesting complex
           protein [Arabidopsis thaliana]
           gi|332193996|gb|AEE32117.1| photosystem I light
           harvesting complex protein 5 [Arabidopsis thaliana]
           gi|332193997|gb|AEE32118.1| photosystem I light
           harvesting complex protein 5 [Arabidopsis thaliana]
          Length = 256

 Score =  222 bits (566), Expect = 4e-56
 Identities = 109/140 (77%), Positives = 122/140 (87%), Gaps = 1/140 (0%)
 Frame = -2

Query: 636 PIWYEAGSVKFEFASTTTLIIVQFLLMGFVETKRYMDFVTPGSQAQYGTFF-GIEAAFEG 460
           P+WYEAG+VKF+FAST TLI+VQFLLMGF ETKRYMDFV+PGSQA+ G+FF G+EAA EG
Sbjct: 117 PVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEG 176

Query: 459 SENGYPGGPLFNPLGLARDAESARVWKLKEIKNGRLAMMAMLGIFVQANVTHAGPIDNLV 280
            E GYPGGPL NPLGLA+D ++A  WKLKEIKNGRLAMMAMLG FVQA+VTH GPIDNLV
Sbjct: 177 LEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLV 236

Query: 279 KHLSNPLHATIIQTLAGSGS 220
           +HLSNP H TIIQTL  S S
Sbjct: 237 EHLSNPWHKTIIQTLFTSTS 256


>dbj|BAH19631.1| AT1G45474 [Arabidopsis thaliana]
          Length = 248

 Score =  222 bits (566), Expect = 4e-56
 Identities = 109/140 (77%), Positives = 122/140 (87%), Gaps = 1/140 (0%)
 Frame = -2

Query: 636 PIWYEAGSVKFEFASTTTLIIVQFLLMGFVETKRYMDFVTPGSQAQYGTFF-GIEAAFEG 460
           P+WYEAG+VKF+FAST TLI+VQFLLMGF ETKRYMDFV+PGSQA+ G+FF G+EAA EG
Sbjct: 109 PVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEG 168

Query: 459 SENGYPGGPLFNPLGLARDAESARVWKLKEIKNGRLAMMAMLGIFVQANVTHAGPIDNLV 280
            E GYPGGPL NPLGLA+D ++A  WKLKEIKNGRLAMMAMLG FVQA+VTH GPIDNLV
Sbjct: 169 LEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLV 228

Query: 279 KHLSNPLHATIIQTLAGSGS 220
           +HLSNP H TIIQTL  S S
Sbjct: 229 EHLSNPWHKTIIQTLFTSTS 248


>gb|AFK43193.1| unknown [Lotus japonicus]
          Length = 213

 Score =  222 bits (565), Expect = 5e-56
 Identities = 105/139 (75%), Positives = 124/139 (89%)
 Frame = -2

Query: 636 PIWYEAGSVKFEFASTTTLIIVQFLLMGFVETKRYMDFVTPGSQAQYGTFFGIEAAFEGS 457
           P+W+EAG+VK+EF +T TLIIVQ LLMGF ETKRYMDF++PGSQA+ G+FFG+EA+FEG 
Sbjct: 75  PVWFEAGAVKYEFTNTQTLIIVQLLLMGFAETKRYMDFISPGSQAKEGSFFGLEASFEGL 134

Query: 456 ENGYPGGPLFNPLGLARDAESARVWKLKEIKNGRLAMMAMLGIFVQANVTHAGPIDNLVK 277
           E GYPGGPL NPLGLA+D ++AR  KLKEIKNGRLAM+A+LGIFVQA+VTH GPIDNLV+
Sbjct: 135 EPGYPGGPLLNPLGLAKDIKNARESKLKEIKNGRLAMVAILGIFVQASVTHVGPIDNLVE 194

Query: 276 HLSNPLHATIIQTLAGSGS 220
           HLSNP H T+IQTLA SGS
Sbjct: 195 HLSNPWHKTVIQTLASSGS 213


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