BLASTX nr result

ID: Papaver23_contig00019638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019638
         (1593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002445810.1| hypothetical protein SORBIDRAFT_07g026150 [S...    98   5e-18
ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like i...    94   8e-17
ref|XP_003553020.1| PREDICTED: FACT complex subunit SPT16-like [...    94   1e-16
ref|XP_003552890.1| PREDICTED: FACT complex subunit SPT16-like [...    94   1e-16
ref|XP_001783705.1| FACT complex subunit [Physcomitrella patens ...    92   3e-16

>ref|XP_002445810.1| hypothetical protein SORBIDRAFT_07g026150 [Sorghum bicolor]
            gi|241942160|gb|EES15305.1| hypothetical protein
            SORBIDRAFT_07g026150 [Sorghum bicolor]
          Length = 1028

 Score = 98.2 bits (243), Expect = 5e-18
 Identities = 83/256 (32%), Positives = 124/256 (48%), Gaps = 14/256 (5%)
 Frame = +2

Query: 470  GVKIMGTLEAACGSGFTFTSS--DIHVHFKDTSVALCFYLKNETAFCFLDPSTDDPDEEL 643
            G K+ G LEA   +GF +++S  D  V     ++   F+                P E+ 
Sbjct: 676  GRKLTGNLEAHF-NGFRYSTSRSDERVDIMYGNIKHAFF---------------QPAEKE 719

Query: 644  KIPSLQFHLRDPVMVGSVETKDIMFALVCFYDDPVKVLDNFVKIVDRAQWDSHRMLPEFQ 823
             I  L FHL + +MVG+ +TKD+ F +       V   D  +  + ++  + H   P+F+
Sbjct: 720  MITLLHFHLHNHIMVGNKKTKDVQFYVEVM---DVVQTDLILMRLKKSSVNDHWSQPQFK 776

Query: 824  VLS--------NCTFKGVLSGSLEGFALTYCALVMFTQLPVTVVPLTDIEIVDLS-VNVG 976
             L            F GV   +      T   LV   + P  VV L++IEIV+L  V  G
Sbjct: 777  GLDLEFDVPLRELGFHGVPYKASAFIIPTSTCLVELIETPFLVVSLSEIEIVNLERVGFG 836

Query: 977  V---DMIVVFKDFERKVLQINSIDMRKLNFIKGCLDMGNVKYYCRDYLNGPKVDWNSKLK 1147
                DM +VFKDF++ VL+I+SI    L+ IK  LD  ++KYY    LN   ++W   LK
Sbjct: 837  TKNFDMAIVFKDFKKDVLRIDSIPSASLDAIKEWLDTTDLKYY-ESRLN---LNWRPILK 892

Query: 1148 EILKDPKKFVESGGWE 1195
             I+ DP+KF++ GGWE
Sbjct: 893  TIIDDPQKFIDDGGWE 908


>ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like isoform 1 [Glycine max]
            gi|356539783|ref|XP_003538373.1| PREDICTED: FACT complex
            subunit SPT16-like isoform 2 [Glycine max]
          Length = 1069

 Score = 94.4 bits (233), Expect = 8e-17
 Identities = 91/278 (32%), Positives = 120/278 (43%), Gaps = 36/278 (12%)
 Frame = +2

Query: 470  GVKIMGTLEAAC-GSGFTFTSSDIHVHFKDTSVALCFYLKNETAFCFLDPSTDDPDEELK 646
            G KI GTLEA   G  ++ T  D  V     ++   F+                P E   
Sbjct: 693  GRKIPGTLEAHVNGFRYSTTRQDERVDIMFPNIKHAFF---------------QPAENEM 737

Query: 647  IPSLQFHLRDPVMVGSVETKDIMFALVCF-------------YDDPV------------K 751
            I  L FHL + +MVG+ +TKD+ F +                YD               K
Sbjct: 738  ITLLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQNVGSGKRSAYDPDELEEEQRERQRKNK 797

Query: 752  VLDNFVKIVDRAQ--WDSHRM----LPEFQVLSNCTFKGVLSGSLEGFALTYCALVMFTQ 913
            +   F   V+R    W   +     L   Q L    F GV   S      T   LV   +
Sbjct: 798  INVEFQTFVNRVNDLWGQPQFNGLDLEFDQPLRELGFPGVPHKSSVFIVPTSACLVELIE 857

Query: 914  LPVTVVPLTDIEIVDLS-VNVG---VDMIVVFKDFERKVLQINSIDMRKLNFIKGCLDMG 1081
             P  VV L++IEIV+L  V +G    DM VVFKDF+R VL+I+SI    L+ IK  LD  
Sbjct: 858  TPFLVVTLSEIEIVNLERVGLGQKNFDMTVVFKDFKRDVLRIDSIPSTSLDGIKEWLDTT 917

Query: 1082 NVKYYCRDYLNGPKVDWNSKLKEILKDPKKFVESGGWE 1195
            ++KYY    LN   ++W   LK I  DP+ F+E GGWE
Sbjct: 918  DIKYY-ESRLN---LNWRQILKTITDDPQSFIEGGGWE 951


>ref|XP_003553020.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1068

 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 91/278 (32%), Positives = 120/278 (43%), Gaps = 36/278 (12%)
 Frame = +2

Query: 470  GVKIMGTLEAAC-GSGFTFTSSDIHVHFKDTSVALCFYLKNETAFCFLDPSTDDPDEELK 646
            G KI GTLEA   G  ++ T  D  V     ++   F+                P E   
Sbjct: 693  GRKIPGTLEAHVNGFRYSTTRQDERVDIMFGNIKHAFF---------------QPAENEM 737

Query: 647  IPSLQFHLRDPVMVGSVETKDIMFALVCF-------------YDDPV------------K 751
            I  L FHL + +MVG+ +TKD+ F +                YD               K
Sbjct: 738  ITLLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQNVGGGKRSAYDPDELEEEQRERQRKNK 797

Query: 752  VLDNFVKIVDRAQ--WDSHRM----LPEFQVLSNCTFKGVLSGSLEGFALTYCALVMFTQ 913
            +   F   V+R    W   +     L   Q L    F GV   S      T   LV   +
Sbjct: 798  INVEFQTFVNRVNDLWGQPQFNGFDLEFDQPLRELGFPGVPHKSSVFIVPTSACLVELIE 857

Query: 914  LPVTVVPLTDIEIVDLS-VNVG---VDMIVVFKDFERKVLQINSIDMRKLNFIKGCLDMG 1081
             P  VV L++IEIV+L  V +G    DM VVFKDF+R VL+I+SI    L+ IK  LD  
Sbjct: 858  TPFLVVTLSEIEIVNLERVGLGQKNFDMTVVFKDFKRDVLRIDSIPSTSLDGIKEWLDTT 917

Query: 1082 NVKYYCRDYLNGPKVDWNSKLKEILKDPKKFVESGGWE 1195
            ++KYY    LN   ++W   LK I  DP+ F+E GGWE
Sbjct: 918  DIKYY-ESRLN---LNWRQILKTITDDPQSFIEGGGWE 951


>ref|XP_003552890.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1064

 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 93/277 (33%), Positives = 127/277 (45%), Gaps = 35/277 (12%)
 Frame = +2

Query: 470  GVKIMGTLEAACGSGFTFTSSDIHVHFKDTSVALCFYLKNETAFCFLDPSTDDPDEELKI 649
            G KI GTLEA   +GF ++++      +D  V + F     + F         P E   I
Sbjct: 690  GRKIPGTLEAHV-NGFRYSTTR-----QDERVDIMFGNIKHSFF--------QPAENEMI 735

Query: 650  PSLQFHLRDPVMVGSVETKDIMFALVCF-------------YD-----DPVKVLDNFVKI 775
              L FHL + +MVG+ +TKD+ F +                YD     +  +  D   KI
Sbjct: 736  TLLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQNVGGGKRSAYDPDELEEEQRERDRKNKI 795

Query: 776  VDRAQWDSHRM-----LPEF--------QVLSNCTFKGVLSGSLEGFALTYCALVMFTQL 916
                Q   +R+      P+F        Q L    F GV   S      T   LV   + 
Sbjct: 796  NVEFQTFVNRLNDLWGQPQFNGLDLEFDQPLRELGFPGVPHKSSVFIVPTSACLVELIET 855

Query: 917  PVTVVPLTDIEIVDLS-VNVG---VDMIVVFKDFERKVLQINSIDMRKLNFIKGCLDMGN 1084
            P  VV L++IEIV+L  V +G    DM VVFKDF+R VL+I+SI    L+ IK  LD  +
Sbjct: 856  PFLVVTLSEIEIVNLERVGLGQKNFDMTVVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTD 915

Query: 1085 VKYYCRDYLNGPKVDWNSKLKEILKDPKKFVESGGWE 1195
            +KYY    LN   ++W   LK I  DP+ F+E GGWE
Sbjct: 916  IKYY-ESRLN---LNWRQILKTITDDPQSFIEGGGWE 948


>ref|XP_001783705.1| FACT complex subunit [Physcomitrella patens subsp. patens]
            gi|162664770|gb|EDQ51477.1| FACT complex subunit
            [Physcomitrella patens subsp. patens]
          Length = 1065

 Score = 92.4 bits (228), Expect = 3e-16
 Identities = 88/277 (31%), Positives = 124/277 (44%), Gaps = 35/277 (12%)
 Frame = +2

Query: 470  GVKIMGTLEAACGSGFTFTSSDIHVHFKDTSVALCFYLKNETAFCFLDPSTDDPDEELKI 649
            G K+ GTLEA   +GF +++       +        Y   + AF         P E+  I
Sbjct: 688  GRKMSGTLEAHT-NGFRYST------MRQEEKVDIMYRNIKHAFF-------QPAEKEMI 733

Query: 650  PSLQFHLRDPVMVGSVETKDIMFALVCFY-------------------------DDPVKV 754
              + FHL + +MVG+ +TKD+ F +                             D   K+
Sbjct: 734  TLVHFHLHNYIMVGTKKTKDVQFYVEVMEVVQTLGGSRRSMMDPDEIEEEQQERDRRNKI 793

Query: 755  LDNFVKIVDRAQ--WDS---HRMLPEFQV-LSNCTFKGVLSGSLEGFALTYCALVMFTQL 916
               F   V R    WD      +  EF +      F GV + S      T   LV   + 
Sbjct: 794  NKEFEAFVKRMAELWDQPPWRELDLEFDIPFRELGFHGVPNKSSAFIVPTVNCLVELIET 853

Query: 917  PVTVVPLTDIEIVDLS-VNVG---VDMIVVFKDFERKVLQINSIDMRKLNFIKGCLDMGN 1084
            P  VV L DIEIV+L  V +G    DM +VFKDF+R+VL+I++I    L+ IK  L+  N
Sbjct: 854  PFLVVSLNDIEIVNLERVGLGQKAFDMAIVFKDFKREVLRIDAIPSTSLDGIKEWLNSMN 913

Query: 1085 VKYYCRDYLNGPKVDWNSKLKEILKDPKKFVESGGWE 1195
            +KYY    +N   ++W   LK IL+DP KF+E GGWE
Sbjct: 914  IKYY-ESRMN---LNWRPILKTILEDPDKFIEDGGWE 946


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