BLASTX nr result

ID: Papaver23_contig00019629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019629
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136417.1| PREDICTED: rhamnogalacturonate lyase-like [C...   254   7e-66
ref|XP_004161760.1| PREDICTED: probable rhamnogalacturonate lyas...   249   2e-64
ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533...   249   2e-64
ref|NP_172459.1| rhamnogalacturonate lyase-like protein [Arabido...   247   1e-63
ref|XP_002892532.1| predicted protein [Arabidopsis lyrata subsp....   245   3e-63

>ref|XP_004136417.1| PREDICTED: rhamnogalacturonate lyase-like [Cucumis sativus]
          Length = 625

 Score =  254 bits (649), Expect = 7e-66
 Identities = 111/188 (59%), Positives = 148/188 (78%)
 Frame = +2

Query: 2   RQRRMPLPEDREPPRGKLLQFKEASLLVDPVEPELKGQVDDKYMYAQNNEDIKVHGWVSS 181
           RQR MPLP+DR+PPRG+ L + EA LLVDP+EP+ KG+VDDKY Y   ++D +VHGW+S+
Sbjct: 151 RQRLMPLPDDRKPPRGQALAYPEAVLLVDPIEPDFKGEVDDKYQYGCESKDSRVHGWIST 210

Query: 182 DPRVGFWHITASDEYRSGGPLKQDLTSHVGPTSLTVFLSSHYMGQDRIPMFRNGEPWKKV 361
           DP +GFW I  ++E+RSGGPLKQ LTSHVGPT+LTVF S+HY G+D +  F + EPWKKV
Sbjct: 211 DPPIGFWQIAPTEEFRSGGPLKQFLTSHVGPTTLTVFHSTHYAGEDMVIKFGDNEPWKKV 270

Query: 362 YGPVFLYLNTAPLCTNESALWDDANEQLQQEAQKLPYNFLASTDYPKSDQRGTINGKILV 541
           YGP+F++LN+ P   +   LW +A +Q+  E Q  PY+F+AS D+PKSDQRGT++GKIL+
Sbjct: 271 YGPIFIHLNSLPEGEDPLRLWQNAKQQMMAEVQSWPYSFIASEDFPKSDQRGTVSGKILI 330

Query: 542 RDRFVGKE 565
           R+R+V  E
Sbjct: 331 RERYVSDE 338


>ref|XP_004161760.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Cucumis
           sativus]
          Length = 626

 Score =  249 bits (637), Expect = 2e-64
 Identities = 111/189 (58%), Positives = 148/189 (78%), Gaps = 1/189 (0%)
 Frame = +2

Query: 2   RQRRMPLPEDREPPRGKLLQFKEASLLVDPVEPELKGQVDDKYMYAQNNEDIKVHGWVSS 181
           RQR MPLP+DR+PPRG+ L + EA LLVDP+EP+ KG+VDDKY Y   ++D +VHGW+S+
Sbjct: 151 RQRLMPLPDDRKPPRGQALAYPEAVLLVDPIEPDFKGEVDDKYQYGCESKDSRVHGWIST 210

Query: 182 DPRVGFWHITASDEYRSGGPLKQDLTSHVGPTSLTV-FLSSHYMGQDRIPMFRNGEPWKK 358
           DP +GFW I  ++E+RSGGPLKQ LTSHVGPT+LTV F S+HY G+D +  F + EPWKK
Sbjct: 211 DPPIGFWQIAPTEEFRSGGPLKQFLTSHVGPTTLTVSFHSTHYAGEDMVIKFGDNEPWKK 270

Query: 359 VYGPVFLYLNTAPLCTNESALWDDANEQLQQEAQKLPYNFLASTDYPKSDQRGTINGKIL 538
           VYGP+F++LN+ P   +   LW +A +Q+  E Q  PY+F+AS D+PKSDQRGT++GKIL
Sbjct: 271 VYGPIFIHLNSLPEGEDPLRLWQNAKQQMMAEVQSWPYSFIASEDFPKSDQRGTVSGKIL 330

Query: 539 VRDRFVGKE 565
           +R+R+V  E
Sbjct: 331 IRERYVSDE 339


>ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533272|gb|EEF35025.1|
           lyase, putative [Ricinus communis]
          Length = 642

 Score =  249 bits (636), Expect = 2e-64
 Identities = 113/188 (60%), Positives = 148/188 (78%)
 Frame = +2

Query: 2   RQRRMPLPEDREPPRGKLLQFKEASLLVDPVEPELKGQVDDKYMYAQNNEDIKVHGWVSS 181
           RQR MPLP+DR  PRG+ L + EA LLV+PVE E KG++DDKY Y+  N+DI+VHGW+  
Sbjct: 165 RQRYMPLPDDRLSPRGQALAYPEAVLLVNPVESEFKGELDDKYQYSCENKDIRVHGWICM 224

Query: 182 DPRVGFWHITASDEYRSGGPLKQDLTSHVGPTSLTVFLSSHYMGQDRIPMFRNGEPWKKV 361
           DP VGFW IT S+E+RSGGP+KQ+LTSHVGPT+L+VFLS+HY G+D +P F  GE WKKV
Sbjct: 225 DPSVGFWQITPSNEFRSGGPVKQNLTSHVGPTTLSVFLSAHYSGEDLVPKFVAGEAWKKV 284

Query: 362 YGPVFLYLNTAPLCTNESALWDDANEQLQQEAQKLPYNFLASTDYPKSDQRGTINGKILV 541
           +GPVF+YLN+  +  +  +LW+DA EQ + E Q  PY F AS DYPKS+QRG+++G++LV
Sbjct: 285 FGPVFMYLNSVLVGDDPLSLWEDAKEQTEIEVQSWPYFFPASEDYPKSEQRGSVSGRLLV 344

Query: 542 RDRFVGKE 565
           +DRFV  +
Sbjct: 345 KDRFVSDD 352


>ref|NP_172459.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana]
           gi|2160178|gb|AAB60741.1| F21M12.27 gene product
           [Arabidopsis thaliana] gi|332190389|gb|AEE28510.1|
           rhamnogalacturonate lyase-like protein [Arabidopsis
           thaliana]
          Length = 631

 Score =  247 bits (630), Expect = 1e-63
 Identities = 112/189 (59%), Positives = 145/189 (76%)
 Frame = +2

Query: 2   RQRRMPLPEDREPPRGKLLQFKEASLLVDPVEPELKGQVDDKYMYAQNNEDIKVHGWVSS 181
           RQR MP+P+DR PPRG+ L + EA  L+DP+EPE KG+VDDKY Y+  ++DIKVHGW+S+
Sbjct: 151 RQRYMPVPDDRVPPRGQPLAYPEAVQLLDPIEPEFKGEVDDKYEYSMESKDIKVHGWIST 210

Query: 182 DPRVGFWHITASDEYRSGGPLKQDLTSHVGPTSLTVFLSSHYMGQDRIPMFRNGEPWKKV 361
           +  VGFW IT S+E+RS GPLKQ L SHVGPT+L VF S+HY+G D I  F+NGE WKKV
Sbjct: 211 NDSVGFWQITPSNEFRSAGPLKQFLGSHVGPTNLAVFHSTHYVGADLIMSFKNGEAWKKV 270

Query: 362 YGPVFLYLNTAPLCTNESALWDDANEQLQQEAQKLPYNFLASTDYPKSDQRGTINGKILV 541
           +GPVF+YLN+ P   +   LW +A  Q + E +K PYNF AS D+P SDQRG+++G++LV
Sbjct: 271 FGPVFIYLNSFPKGVDPLLLWHEAKNQTKIEEEKWPYNFTASDDFPASDQRGSVSGRLLV 330

Query: 542 RDRFVGKED 568
           RDRF+  ED
Sbjct: 331 RDRFISSED 339


>ref|XP_002892532.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338374|gb|EFH68791.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 664

 Score =  245 bits (626), Expect = 3e-63
 Identities = 110/189 (58%), Positives = 146/189 (77%)
 Frame = +2

Query: 2   RQRRMPLPEDREPPRGKLLQFKEASLLVDPVEPELKGQVDDKYMYAQNNEDIKVHGWVSS 181
           RQR MPLP+DR PPRG+ L + EA  L+DP+EPE KG+VDDKY Y+  ++DIKVHGW+S+
Sbjct: 184 RQRYMPLPDDRIPPRGQPLAYPEAVQLLDPIEPEFKGEVDDKYEYSMESKDIKVHGWIST 243

Query: 182 DPRVGFWHITASDEYRSGGPLKQDLTSHVGPTSLTVFLSSHYMGQDRIPMFRNGEPWKKV 361
           +  VGFW IT S+E+RS GPLKQ L SHVGPT+L +F S+HY+G + I  F+NGE WKKV
Sbjct: 244 NDSVGFWQITPSNEFRSAGPLKQFLGSHVGPTNLAIFHSTHYVGAELIMSFKNGEAWKKV 303

Query: 362 YGPVFLYLNTAPLCTNESALWDDANEQLQQEAQKLPYNFLASTDYPKSDQRGTINGKILV 541
           +GPVF+YLN+ P   +   LW +A  Q + E +K PYNF AS D+P+SDQRG+++G+++V
Sbjct: 304 FGPVFIYLNSFPKGVDPLLLWHEAKNQTKIEEEKWPYNFTASDDFPESDQRGSVSGRLVV 363

Query: 542 RDRFVGKED 568
           RDRF+  ED
Sbjct: 364 RDRFISSED 372


Top