BLASTX nr result

ID: Papaver23_contig00019614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019614
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
ref|XP_003636673.1| F-box family protein [Medicago truncatula] g...    86   4e-15
ref|NP_567414.1| putative F-box/LRR-repeat protein [Arabidopsis ...    84   2e-14
ref|XP_002319944.1| f-box family protein [Populus trichocarpa] g...    83   3e-14
ref|NP_001030887.1| F-box protein [Arabidopsis thaliana] gi|3326...    82   4e-14

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 55/136 (40%), Positives = 75/136 (55%)
 Frame = +2

Query: 143 TNQKQLKEQNSMSEQAEDRITNLPDSLLHYVLSLLDIKEVARTSVLSKRWYCIWISIPTL 322
           T +K+LK +   ++  E  I NLPD+LL ++LS L  +   RTS+LSK+W  +W S   L
Sbjct: 10  TKRKKLKAEKE-TDSGEKSIGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNL 68

Query: 323 DFRSLSDPFPTTPSRELSDRESSKFMDMVDRILHLHDMSSIQKLSLRWNYPLNESRVKLW 502
            F  L      +P R+L       FMD VDR+L L   S+I +  L      + SRV  W
Sbjct: 69  TFFGLK-----SPKRKL-------FMDFVDRVLALRGPSNIVQFYLSCEVKDDPSRVGTW 116

Query: 503 ISAAIRRNVEKLSLTL 550
           ISAA+ RNV+ L L L
Sbjct: 117 ISAAVNRNVKDLYLEL 132


>ref|XP_003636673.1| F-box family protein [Medicago truncatula]
           gi|355502608|gb|AES83811.1| F-box family protein
           [Medicago truncatula]
          Length = 515

 Score = 85.9 bits (211), Expect = 4e-15
 Identities = 51/137 (37%), Positives = 79/137 (57%), Gaps = 6/137 (4%)
 Frame = +2

Query: 152 KQLKEQNSMSEQAEDRITNLPDSLLHYVLSLLDIKEVARTSVLSKRWYCIWISIPTLDFR 331
           +Q +E N+ S+   DRI++LPD ++H +L LL IK VA+ SVLSKRW  +W S P LDF 
Sbjct: 12  EQEQENNAKSKPLIDRISDLPDDIIHQILLLLPIKCVAQMSVLSKRWKFLWTSFPDLDFT 71

Query: 332 SLSDPFPTTPSRELSDRE------SSKFMDMVDRILHLHDMSSIQKLSLRWNYPLNESRV 493
           +L DPFP   ++     +      SS  +D + ++L + D+       L +   L+ SR+
Sbjct: 72  TL-DPFPLISTKNHKKIDISRHPLSSSKLDFITQVLSIRDVKHKDIRVLCFRASLSFSRL 130

Query: 494 KLWISAAIRRNVEKLSL 544
              + +AIR NV +L +
Sbjct: 131 NNLVRSAIRHNVRELDI 147


>ref|NP_567414.1| putative F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75318094|sp|O23257.1|FBL72_ARATH RecName:
           Full=Putative F-box/LRR-repeat protein At4g13960
           gi|2244752|emb|CAB10175.1| hypothetical protein
           [Arabidopsis thaliana] gi|7268100|emb|CAB78438.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332657951|gb|AEE83351.1| putative F-box/LRR-repeat
           protein [Arabidopsis thaliana]
          Length = 434

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 50/124 (40%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
 Frame = +2

Query: 194 DRITNLPDSLLHYVLSLLDIKEVARTSVLSKRWYCIWISIPTLDFRSLSDPFPTTPSREL 373
           D +++LPD +L+++LS L  KE A TS+LSKRW  ++  +P LD   + D     P    
Sbjct: 2   DHVSSLPDEVLYHILSFLTTKEAALTSILSKRWRNLFTFVPNLD---IDDSVFLHPQEGK 58

Query: 374 SDRE--SSKFMDMVDRILHLHDMSSIQKLSLRWNYPLNESRVKLWISAAIRRNVEKLSLT 547
            DR      FM  VDR+L L   S I+KLSL+     +  RV  WIS A+ R V +L L 
Sbjct: 59  EDRYEIQKSFMKFVDRVLALQGNSPIKKLSLKLRTGFDSHRVDGWISNALARGVTELDLL 118

Query: 548 LIQN 559
           +I N
Sbjct: 119 IILN 122


>ref|XP_002319944.1| f-box family protein [Populus trichocarpa]
           gi|222858320|gb|EEE95867.1| f-box family protein
           [Populus trichocarpa]
          Length = 511

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 50/140 (35%), Positives = 81/140 (57%), Gaps = 3/140 (2%)
 Frame = +2

Query: 134 MELTNQKQLK---EQNSMSEQAEDRITNLPDSLLHYVLSLLDIKEVARTSVLSKRWYCIW 304
           ME  + K+ K     N+  +   DRI++LPD++LH++L LL +K +A+TSVLS+RW  +W
Sbjct: 1   METRSTKRKKLWFASNNEGDNDIDRISDLPDAILHHILLLLPLKSIAQTSVLSQRWRSLW 60

Query: 305 ISIPTLDFRSLSDPFPTTPSRELSDRESSKFMDMVDRILHLHDMSSIQKLSLRWNYPLNE 484
            S P LDF +++       +R+L  +     MD +  +L L D  S  + +LR+   L+ 
Sbjct: 61  SSFPDLDFTTMNPSKAICSTRKLKSKRWWPSMDFIANVLALRDKHSDLR-ALRFRAHLSF 119

Query: 485 SRVKLWISAAIRRNVEKLSL 544
           S +   I  AIR NV++L +
Sbjct: 120 SHLNGLIRRAIRCNVQELDV 139


>ref|NP_001030887.1| F-box protein [Arabidopsis thaliana] gi|332646338|gb|AEE79859.1|
           F-box protein [Arabidopsis thaliana]
          Length = 345

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 49/120 (40%), Positives = 65/120 (54%)
 Frame = +2

Query: 194 DRITNLPDSLLHYVLSLLDIKEVARTSVLSKRWYCIWISIPTLDFRSLSDPFPTTPSREL 373
           DR+ +LPD LL ++LS L  KE A TS+LSKRW  +   +P L F  +    P     E 
Sbjct: 2   DRVGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKPE- 60

Query: 374 SDRESSKFMDMVDRILHLHDMSSIQKLSLRWNYPLNESRVKLWISAAIRRNVEKLSLTLI 553
            D     FMD VDR+L L   S I+K SL+    ++  RV  WIS  + R V +L L +I
Sbjct: 61  RDEIRQSFMDFVDRVLALQAESPIKKFSLKCRIGVDSDRVDGWISNVLNRGVSELDLLII 120


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