BLASTX nr result

ID: Papaver23_contig00019502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019502
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS ...   196   3e-48
ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, p...   188   6e-46
ref|XP_002302200.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_002306675.1| predicted protein [Populus trichocarpa] gi|2...   183   3e-44
ref|NP_564488.1| sequence-specific DNA binding transcription fac...   182   6e-44

>ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS [Vitis vinifera]
           gi|302142747|emb|CBI19950.3| unnamed protein product
           [Vitis vinifera]
          Length = 358

 Score =  196 bits (498), Expect = 3e-48
 Identities = 99/139 (71%), Positives = 113/139 (81%)
 Frame = -3

Query: 641 LSRQFREIATIIMQKTFNPETKRPYTFSMIEKLMHGIHFVLDPHNSSKNQESLRAQALRV 462
           LS QFR+IATI+MQKT NPET+RPYT SMIE+LMH IHF +DP++SSK Q      AL V
Sbjct: 107 LSSQFRDIATIVMQKTINPETQRPYTSSMIERLMHEIHFSVDPNSSSKKQ------ALEV 160

Query: 461 IRELQKRYPIKRAPMRLRLIVPEENSCSLMEKLNAWNAEIVSKVESGNQLSLVCEMEPSF 282
           IRELQK +PIKR PMRLRL VP++N  SL+EKLN WNA IVSK ESG QLS++CEMEP  
Sbjct: 161 IRELQKHFPIKRCPMRLRLTVPQQNFSSLLEKLNVWNASIVSKDESGGQLSIICEMEPGI 220

Query: 281 FRDCDALVRSLYGRSEILA 225
           FRDCDALVR+L GR EILA
Sbjct: 221 FRDCDALVRNLQGRLEILA 239


>ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, putative [Ricinus
           communis] gi|223540466|gb|EEF42033.1|
           Shwachman-Bodian-Diamond syndrome protein, putative
           [Ricinus communis]
          Length = 356

 Score =  188 bits (478), Expect = 6e-46
 Identities = 92/139 (66%), Positives = 112/139 (80%)
 Frame = -3

Query: 641 LSRQFREIATIIMQKTFNPETKRPYTFSMIEKLMHGIHFVLDPHNSSKNQESLRAQALRV 462
           L+ QFR+IAT++MQKT NPET+RPYT SMIE+LMH IHF +DPH+SSK Q      AL V
Sbjct: 106 LTSQFRDIATMVMQKTVNPETQRPYTISMIERLMHEIHFAVDPHSSSKKQ------ALEV 159

Query: 461 IRELQKRYPIKRAPMRLRLIVPEENSCSLMEKLNAWNAEIVSKVESGNQLSLVCEMEPSF 282
           IRELQK +PIKR+PMRLRL + E N  SL+EKLN WNA +VSK ESG+QLS++CE++P  
Sbjct: 160 IRELQKHFPIKRSPMRLRLAISEPNISSLLEKLNTWNATVVSKDESGSQLSVICELDPGL 219

Query: 281 FRDCDALVRSLYGRSEILA 225
           FR+CD LVR+L GR EILA
Sbjct: 220 FRECDVLVRNLQGRLEILA 238


>ref|XP_002302200.1| predicted protein [Populus trichocarpa] gi|222843926|gb|EEE81473.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  186 bits (473), Expect = 2e-45
 Identities = 93/139 (66%), Positives = 112/139 (80%)
 Frame = -3

Query: 641 LSRQFREIATIIMQKTFNPETKRPYTFSMIEKLMHGIHFVLDPHNSSKNQESLRAQALRV 462
           LS QFR+IATI+MQKT NPET+RPYT SM+E+LMH IHF +DPH+SSK Q      AL V
Sbjct: 106 LSSQFRDIATIVMQKTINPETQRPYTISMVERLMHEIHFAVDPHSSSKKQ------ALDV 159

Query: 461 IRELQKRYPIKRAPMRLRLIVPEENSCSLMEKLNAWNAEIVSKVESGNQLSLVCEMEPSF 282
           IRELQK +PIKR+PMRLRL V  +   +L+EKLNAW+A +VSK ESG+  S++CEM+P F
Sbjct: 160 IRELQKHFPIKRSPMRLRLAVIGQKFPNLLEKLNAWDANVVSKDESGSHQSVICEMDPGF 219

Query: 281 FRDCDALVRSLYGRSEILA 225
           FRDCDALVR+L GR EILA
Sbjct: 220 FRDCDALVRNLQGRMEILA 238


>ref|XP_002306675.1| predicted protein [Populus trichocarpa] gi|222856124|gb|EEE93671.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score =  183 bits (464), Expect = 3e-44
 Identities = 91/139 (65%), Positives = 110/139 (79%)
 Frame = -3

Query: 641 LSRQFREIATIIMQKTFNPETKRPYTFSMIEKLMHGIHFVLDPHNSSKNQESLRAQALRV 462
           LS QFR+IATI+MQKT NPET+RPYT SMIE+LMH  HF ++PHNSSK Q      AL V
Sbjct: 107 LSSQFRDIATIVMQKTINPETQRPYTISMIERLMHETHFAVEPHNSSKKQ------ALDV 160

Query: 461 IRELQKRYPIKRAPMRLRLIVPEENSCSLMEKLNAWNAEIVSKVESGNQLSLVCEMEPSF 282
           IRELQK +PIKR+PMRL L V  +N  +L+EKL AW+A +VSK ESG++ S++CEM+P F
Sbjct: 161 IRELQKHFPIKRSPMRLGLTVSGQNFSTLLEKLGAWDANVVSKDESGSRQSIICEMDPGF 220

Query: 281 FRDCDALVRSLYGRSEILA 225
           FRDCD LVR+L GR EILA
Sbjct: 221 FRDCDTLVRNLQGRLEILA 239


>ref|NP_564488.1| sequence-specific DNA binding transcription factor [Arabidopsis
           thaliana] gi|7523664|gb|AAF63104.1|AC006423_5 Unknown
           protein [Arabidopsis thaliana]
           gi|15450898|gb|AAK96720.1| Unknown protein [Arabidopsis
           thaliana] gi|30725592|gb|AAP37818.1| At1g43860
           [Arabidopsis thaliana] gi|332193881|gb|AEE32002.1|
           sequence-specific DNA binding transcription factor
           [Arabidopsis thaliana]
          Length = 370

 Score =  182 bits (461), Expect = 6e-44
 Identities = 102/201 (50%), Positives = 126/201 (62%), Gaps = 3/201 (1%)
 Frame = -3

Query: 638 SRQFREIATIIMQKTFNPETKRPYTFSMIEKLMHGIHFVLDPHNSSKNQESLRAQALRVI 459
           S QFR+IATI+MQKT NPET+RPYT SM+E+LMH IHF +DPH++SK Q      AL VI
Sbjct: 107 SSQFRDIATIVMQKTINPETQRPYTISMVERLMHEIHFAVDPHSNSKKQ------ALDVI 160

Query: 458 RELQKRYPIKRAPMRLRLIVPEENSCSLMEKLNAWNAEIVSKVESGNQLSLVCEMEPSFF 279
           RELQK +PIKR+PMRLRL VP +N  SL+EKL  W+  +VSK ESG Q+S VCEMEP  F
Sbjct: 161 RELQKHFPIKRSPMRLRLTVPVQNFPSLLEKLKEWDGSVVSKDESGTQMSTVCEMEPGLF 220

Query: 278 RDCDALVRSLYGRSEILAEKXXXXXXXXXXDVVEPSH---YSPVPLNTAELDEIKLSDGY 108
           R+CD+ VRS+ GR EILA               E       +  PL  AE +   L+D  
Sbjct: 221 RECDSHVRSIQGRLEILAVSVHAEGDTSMDHYDEHDDMALQTHKPLLPAETETKDLTDPV 280

Query: 107 YRNSQFPQEMELIRNSRFPQE 45
              S+  Q+ E+       QE
Sbjct: 281 VELSKKLQKQEISTTDNIKQE 301


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